RNA–Protein interactions for RNA: ENST00000508504.1

TRIM60-203, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM60, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-203ENST00000508504 ITSN2Q9NZM3 1697 aa26.88■■□□□ 1.89
TRIM60-203ENST00000508504 ARHGAP5Q13017 1502 aa26.88■■□□□ 1.89
TRIM60-203ENST00000508504 FGD6Q6ZV73 1430 aa26.88■■□□□ 1.89
TRIM60-203ENST00000508504 PPRC1Q5VV67 1664 aaKnown RBP26.88■■□□□ 1.89
TRIM60-203ENST00000508504 ZNF777Q9ULD5 760 aaPredicted RBP26.86■■□□□ 1.89
TRIM60-203ENST00000508504 FANCAO15360 1455 aa26.84■■□□□ 1.89
TRIM60-203ENST00000508504 ARAP3Q8WWN8 1544 aa26.83■■□□□ 1.89
TRIM60-203ENST00000508504 MIA2Q96PC5 1412 aa26.82■■□□□ 1.88
TRIM60-203ENST00000508504 EFCAB2Q5VUJ9 269 aa26.81■■□□□ 1.88
TRIM60-203ENST00000508504 SAMD9LQ8IVG5 1584 aa26.8■■□□□ 1.88
TRIM60-203ENST00000508504 PTPN23Q9H3S7 1636 aa26.8■■□□□ 1.88
TRIM60-203ENST00000508504 RRBP1Q9P2E9 1410 aaKnown RBP26.79■■□□□ 1.88
TRIM60-203ENST00000508504 CAMSAP2Q08AD1 1489 aa26.78■■□□□ 1.88
TRIM60-203ENST00000508504 FAM50AQ14320 339 aaKnown RBP26.76■■□□□ 1.87
TRIM60-203ENST00000508504 AKNAQ7Z591 1439 aa26.75■■□□□ 1.87
TRIM60-203ENST00000508504 TCOF1Q13428 1488 aaKnown RBP26.74■■□□□ 1.87
TRIM60-203ENST00000508504 ARHGEF12Q9NZN5 1544 aa26.74■■□□□ 1.87
TRIM60-203ENST00000508504 TEX14Q8IWB6 1497 aa26.72■■□□□ 1.87
TRIM60-203ENST00000508504 NEO1Q92859 1461 aa26.72■■□□□ 1.87
TRIM60-203ENST00000508504 HNRNPMP52272 730 aaKnown RBP eCLIP26.72■■□□□ 1.87
TRIM60-203ENST00000508504 ABCC1P33527 1531 aa26.71■■□□□ 1.87
TRIM60-203ENST00000508504 SYCP2Q9BX26 1530 aa26.71■■□□□ 1.87
TRIM60-203ENST00000508504 ADGRL1O94910 1474 aa26.7■■□□□ 1.86
TRIM60-203ENST00000508504 CFAP74Q9C0B2 1584 aa26.69■■□□□ 1.86
TRIM60-203ENST00000508504 MBD5Q9P267 1494 aa26.68■■□□□ 1.86
TRIM60-203ENST00000508504 SCAPERQ9BY12 1400 aa26.68■■□□□ 1.86
TRIM60-203ENST00000508504 KIAA1107Q9UPP5 1409 aa26.65■■□□□ 1.86
TRIM60-203ENST00000508504 TRAPPC8Q9Y2L5 1435 aa26.65■■□□□ 1.86
TRIM60-203ENST00000508504 COL17A1Q9UMD9 1497 aaPredicted RBP26.65■■□□□ 1.86
TRIM60-203ENST00000508504 ITGAEP38570 1179 aa26.64■■□□□ 1.86
TRIM60-203ENST00000508504 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.63■■□□□ 1.85
TRIM60-203ENST00000508504 PLEKHH2Q8IVE3 1493 aa26.63■■□□□ 1.85
TRIM60-203ENST00000508504 RAPGEF3O95398 923 aa26.62■■□□□ 1.85
TRIM60-203ENST00000508504 AFAP1Q8N556 730 aa26.62■■□□□ 1.85
TRIM60-203ENST00000508504 ABCC5O15440 1437 aa26.6■■□□□ 1.85
TRIM60-203ENST00000508504 PTPRKQ15262 1439 aa26.6■■□□□ 1.85
TRIM60-203ENST00000508504 TRIM26Q12899 539 aaPredicted RBP26.6■■□□□ 1.85
TRIM60-203ENST00000508504 DNMT1P26358 1616 aaKnown RBP26.58■■□□□ 1.85
TRIM60-203ENST00000508504 DAPK1P53355 1430 aa26.58■■□□□ 1.85
TRIM60-203ENST00000508504 ARHGEF5Q12774 1597 aa26.58■■□□□ 1.85
TRIM60-203ENST00000508504 DENND4BO75064 1496 aaPredicted RBP26.57■■□□□ 1.84
TRIM60-203ENST00000508504 POGZQ7Z3K3 1410 aa26.57■■□□□ 1.84
TRIM60-203ENST00000508504 CCDC141Q6ZP82 1450 aa26.56■■□□□ 1.84
TRIM60-203ENST00000508504 FRMPD1Q5SYB0 1578 aa26.55■■□□□ 1.84
TRIM60-203ENST00000508504 RICTORQ6R327 1708 aa26.55■■□□□ 1.84
TRIM60-203ENST00000508504 CHIC2Q9UKJ5 165 aa26.54■■□□□ 1.84
TRIM60-203ENST00000508504 ZNF518AQ6AHZ1 1483 aa26.52■■□□□ 1.84
TRIM60-203ENST00000508504 CROCC2H7BZ55 1655 aa26.52■■□□□ 1.84
TRIM60-203ENST00000508504 RSPH4AQ5TD94 716 aa26.5■■□□□ 1.83
TRIM60-203ENST00000508504 KDM5CP41229 1560 aa26.49■■□□□ 1.83
TRIM60-203ENST00000508504 C9orf84Q5VXU9 1444 aa26.48■■□□□ 1.83
TRIM60-203ENST00000508504 KDM6BO15054 1643 aa26.48■■□□□ 1.83
TRIM60-203ENST00000508504 TSPY4P0CV99 314 aa26.47■■□□□ 1.83
TRIM60-203ENST00000508504 TSPY10P0CW01 314 aa26.47■■□□□ 1.83
TRIM60-203ENST00000508504 PCGF6Q9BYE7 350 aa26.46■■□□□ 1.83
TRIM60-203ENST00000508504 SPAG9O60271 1321 aaKnown RBP26.46■■□□□ 1.83
TRIM60-203ENST00000508504 SHANK2Q9UPX8 1470 aa26.44■■□□□ 1.82
TRIM60-203ENST00000508504 ZFYVE16Q7Z3T8 1539 aa26.44■■□□□ 1.82
TRIM60-203ENST00000508504 INO80Q9ULG1 1556 aaPredicted RBP26.42■■□□□ 1.82
TRIM60-203ENST00000508504 KIDINS220Q9ULH0 1771 aa26.42■■□□□ 1.82
TRIM60-203ENST00000508504 MAST1Q9Y2H9 1570 aa26.41■■□□□ 1.82
TRIM60-203ENST00000508504 MYT1LQ9UL68 1186 aa26.41■■□□□ 1.82
TRIM60-203ENST00000508504 ATP7AQ04656 1500 aa26.4■■□□□ 1.82
TRIM60-203ENST00000508504 ZMYM4Q5VZL5 1548 aa26.4■■□□□ 1.82
TRIM60-203ENST00000508504 HECW2Q9P2P5 1572 aa26.4■■□□□ 1.82
TRIM60-203ENST00000508504 RRP7BPQ9NSQ0 103 aa26.4■■□□□ 1.82
TRIM60-203ENST00000508504 MLH3Q9UHC1 1453 aa26.4■■□□□ 1.82
TRIM60-203ENST00000508504 YEATS2Q9ULM3 1422 aa26.39■■□□□ 1.82
TRIM60-203ENST00000508504 NCOA1Q15788 1441 aa26.38■■□□□ 1.81
TRIM60-203ENST00000508504 RTEL1-TNFRSF6BF6WH68 1400 aa26.37■■□□□ 1.81
TRIM60-203ENST00000508504 ADGRL2O95490 1459 aa26.37■■□□□ 1.81
TRIM60-203ENST00000508504 ADGBQ8N7X0 1667 aa26.36■■□□□ 1.81
TRIM60-203ENST00000508504 ROCK1Q13464 1354 aa26.34■■□□□ 1.81
TRIM60-203ENST00000508504 ANKRD30AQ9BXX3 1397 aa26.34■■□□□ 1.81
TRIM60-203ENST00000508504 ABCA6Q8N139 1617 aa26.34■■□□□ 1.81
TRIM60-203ENST00000508504 KIF15Q9NS87 1388 aa26.32■■□□□ 1.8
TRIM60-203ENST00000508504 PLXNC1O60486 1568 aa26.32■■□□□ 1.8
TRIM60-203ENST00000508504 MAGI2Q86UL8 1455 aa26.31■■□□□ 1.8
TRIM60-203ENST00000508504 DIP2CQ9Y2E4 1556 aa26.31■■□□□ 1.8
TRIM60-203ENST00000508504 NAIPQ13075 1403 aa26.3■■□□□ 1.8
TRIM60-203ENST00000508504 HFM1A2PYH4 1435 aa26.28■■□□□ 1.8
TRIM60-203ENST00000508504 ARHGEF40Q8TER5 1519 aa26.26■■□□□ 1.79
TRIM60-203ENST00000508504 GCC2Q8IWJ2 1684 aa26.23■■□□□ 1.79
TRIM60-203ENST00000508504 SIGLEC1Q9BZZ2 1709 aa26.22■■□□□ 1.79
TRIM60-203ENST00000508504 A2MP01023 1474 aa26.22■■□□□ 1.79
TRIM60-203ENST00000508504 ANKRD50Q9ULJ7 1429 aa26.21■■□□□ 1.79
TRIM60-203ENST00000508504 ATP10AO60312 1499 aa26.21■■□□□ 1.79
TRIM60-203ENST00000508504 DUOX2Q9NRD8 1548 aa26.21■■□□□ 1.79
TRIM60-203ENST00000508504 DHX29Q7Z478 1369 aaKnown RBP26.2■■□□□ 1.78
TRIM60-203ENST00000508504 SETD5Q9C0A6 1442 aa26.19■■□□□ 1.78
TRIM60-203ENST00000508504 RAB3GAP2Q9H2M9 1393 aa26.17■■□□□ 1.78
TRIM60-203ENST00000508504 ERBINQ96RT1 1412 aa26.15■■□□□ 1.78
TRIM60-203ENST00000508504 REREQ9P2R6 1566 aa26.12■■□□□ 1.77
TRIM60-203ENST00000508504 KIF3BO15066 747 aa26.12■■□□□ 1.77
TRIM60-203ENST00000508504 EIF2AK4Q9P2K8 1649 aaKnown RBP26.07■■□□□ 1.76
TRIM60-203ENST00000508504 AGLP35573 1532 aa26.05■■□□□ 1.76
TRIM60-203ENST00000508504 ARID4BQ4LE39 1312 aaPredicted RBP26.05■■□□□ 1.76
TRIM60-203ENST00000508504 GGT6Q6P531 493 aa26.04■■□□□ 1.76
TRIM60-203ENST00000508504 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.04■■□□□ 1.76
TRIM60-203ENST00000508504 BCORL1Q5H9F3 1711 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms