RNA–Protein interactions for RNA: ENST00000507261.1

RACK1-215, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-215ENST00000507261 CDC42BPBQ9Y5S2 1711 aa13.03□□□□□ -0.32
RACK1-215ENST00000507261 ZNF644Q9H582 1327 aaPredicted RBP13.03□□□□□ -0.32
RACK1-215ENST00000507261 TCOF1Q13428 1488 aaKnown RBP13.03□□□□□ -0.32
RACK1-215ENST00000507261 KIF13AQ9H1H9 1805 aa13.02□□□□□ -0.32
RACK1-215ENST00000507261 TRIM26Q12899 539 aaPredicted RBP13.02□□□□□ -0.33
RACK1-215ENST00000507261 ARHGAP5Q13017 1502 aa13.02□□□□□ -0.33
RACK1-215ENST00000507261 PTPN23Q9H3S7 1636 aa13.02□□□□□ -0.33
RACK1-215ENST00000507261 EFCAB2Q5VUJ9 269 aa13.01□□□□□ -0.33
RACK1-215ENST00000507261 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.01□□□□□ -0.33
RACK1-215ENST00000507261 AEBP2Q6ZN18 517 aaPredicted RBP13□□□□□ -0.33
RACK1-215ENST00000507261 ZNF777Q9ULD5 760 aaPredicted RBP13□□□□□ -0.33
RACK1-215ENST00000507261 SAMD9LQ8IVG5 1584 aa12.99□□□□□ -0.33
RACK1-215ENST00000507261 FANCAO15360 1455 aa12.99□□□□□ -0.33
RACK1-215ENST00000507261 CAMSAP2Q08AD1 1489 aa12.99□□□□□ -0.33
RACK1-215ENST00000507261 FAM50AQ14320 339 aaKnown RBP12.99□□□□□ -0.33
RACK1-215ENST00000507261 PPRC1Q5VV67 1664 aaKnown RBP12.97□□□□□ -0.33
RACK1-215ENST00000507261 TRHP20396 242 aaPredicted RBP12.97□□□□□ -0.33
RACK1-215ENST00000507261 AKNAQ7Z591 1439 aa12.96□□□□□ -0.33
RACK1-215ENST00000507261 KIAA1107Q9UPP5 1409 aa12.96□□□□□ -0.33
RACK1-215ENST00000507261 PLEKHH2Q8IVE3 1493 aa12.96□□□□□ -0.34
RACK1-215ENST00000507261 NEO1Q92859 1461 aa12.96□□□□□ -0.34
RACK1-215ENST00000507261 MBD5Q9P267 1494 aa12.96□□□□□ -0.34
RACK1-215ENST00000507261 CFAP74Q9C0B2 1584 aa12.95□□□□□ -0.34
RACK1-215ENST00000507261 ABCC1P33527 1531 aa12.95□□□□□ -0.34
RACK1-215ENST00000507261 ARHGEF12Q9NZN5 1544 aa12.95□□□□□ -0.34
RACK1-215ENST00000507261 HNRNPMP52272 730 aaKnown RBP eCLIP12.95□□□□□ -0.342e-9■■■□□ 17.5
RACK1-215ENST00000507261 TEX14Q8IWB6 1497 aa12.95□□□□□ -0.34
RACK1-215ENST00000507261 ABCC5O15440 1437 aa12.94□□□□□ -0.34
RACK1-215ENST00000507261 TSPOAP1O95153 1857 aa12.93□□□□□ -0.34
RACK1-215ENST00000507261 SYCP2Q9BX26 1530 aa12.93□□□□□ -0.34
RACK1-215ENST00000507261 ADGRL1O94910 1474 aa12.92□□□□□ -0.34
RACK1-215ENST00000507261 ARHGEF5Q12774 1597 aa12.92□□□□□ -0.34
RACK1-215ENST00000507261 PTPRKQ15262 1439 aa12.92□□□□□ -0.34
RACK1-215ENST00000507261 RSPH4AQ5TD94 716 aa12.92□□□□□ -0.34
RACK1-215ENST00000507261 SCAPERQ9BY12 1400 aa12.92□□□□□ -0.34
RACK1-215ENST00000507261 DAPK1P53355 1430 aa12.91□□□□□ -0.34
RACK1-215ENST00000507261 ITGAEP38570 1179 aa12.91□□□□□ -0.34
RACK1-215ENST00000507261 PCGF6Q9BYE7 350 aa12.91□□□□□ -0.34
RACK1-215ENST00000507261 DNMT1P26358 1616 aaKnown RBP12.91□□□□□ -0.34
RACK1-215ENST00000507261 TRAPPC8Q9Y2L5 1435 aa12.9□□□□□ -0.34
RACK1-215ENST00000507261 AFAP1Q8N556 730 aa12.89□□□□□ -0.35
RACK1-215ENST00000507261 CCDC141Q6ZP82 1450 aa12.89□□□□□ -0.35
RACK1-215ENST00000507261 POGZQ7Z3K3 1410 aa12.88□□□□□ -0.35
RACK1-215ENST00000507261 DENND4BO75064 1496 aaPredicted RBP12.87□□□□□ -0.35
RACK1-215ENST00000507261 TSPY4P0CV99 314 aa12.87□□□□□ -0.35
RACK1-215ENST00000507261 TSPY10P0CW01 314 aa12.87□□□□□ -0.35
RACK1-215ENST00000507261 SHANK2Q9UPX8 1470 aa12.86□□□□□ -0.35
RACK1-215ENST00000507261 RAPGEF3O95398 923 aa12.86□□□□□ -0.35
RACK1-215ENST00000507261 CHIC2Q9UKJ5 165 aa12.86□□□□□ -0.35
RACK1-215ENST00000507261 CROCC2H7BZ55 1655 aa12.86□□□□□ -0.35
RACK1-215ENST00000507261 ZNF518AQ6AHZ1 1483 aa12.85□□□□□ -0.35
RACK1-215ENST00000507261 COL17A1Q9UMD9 1497 aaPredicted RBP12.85□□□□□ -0.35
RACK1-215ENST00000507261 C9orf84Q5VXU9 1444 aa12.85□□□□□ -0.35
RACK1-215ENST00000507261 MAST1Q9Y2H9 1570 aa12.85□□□□□ -0.35
RACK1-215ENST00000507261 ROCK1Q13464 1354 aa12.84□□□□□ -0.35
RACK1-215ENST00000507261 FRMPD1Q5SYB0 1578 aa12.84□□□□□ -0.35
RACK1-215ENST00000507261 SPAG9O60271 1321 aaKnown RBP12.84□□□□□ -0.35
RACK1-215ENST00000507261 RICTORQ6R327 1708 aa12.83□□□□□ -0.36
RACK1-215ENST00000507261 KDM5CP41229 1560 aa12.83□□□□□ -0.36
RACK1-215ENST00000507261 ADGRL2O95490 1459 aa12.83□□□□□ -0.36
RACK1-215ENST00000507261 RTEL1-TNFRSF6BF6WH68 1400 aa12.82□□□□□ -0.36
RACK1-215ENST00000507261 NCOA1Q15788 1441 aa12.82□□□□□ -0.36
RACK1-215ENST00000507261 ANKRD30AQ9BXX3 1397 aa12.81□□□□□ -0.36
RACK1-215ENST00000507261 MLH3Q9UHC1 1453 aa12.81□□□□□ -0.36
RACK1-215ENST00000507261 ZFYVE16Q7Z3T8 1539 aa12.81□□□□□ -0.36
RACK1-215ENST00000507261 RRP7BPQ9NSQ0 103 aa12.8□□□□□ -0.36
RACK1-215ENST00000507261 INO80Q9ULG1 1556 aaPredicted RBP12.8□□□□□ -0.36
RACK1-215ENST00000507261 ADGBQ8N7X0 1667 aa12.8□□□□□ -0.36
RACK1-215ENST00000507261 HFM1A2PYH4 1435 aa12.79□□□□□ -0.36
RACK1-215ENST00000507261 ATP7AQ04656 1500 aa12.79□□□□□ -0.36
RACK1-215ENST00000507261 ZMYM4Q5VZL5 1548 aa12.79□□□□□ -0.36
RACK1-215ENST00000507261 NAIPQ13075 1403 aa12.79□□□□□ -0.36
RACK1-215ENST00000507261 PLXNC1O60486 1568 aa12.78□□□□□ -0.36
RACK1-215ENST00000507261 KIDINS220Q9ULH0 1771 aa12.78□□□□□ -0.36
RACK1-215ENST00000507261 MAGI2Q86UL8 1455 aa12.78□□□□□ -0.36
RACK1-215ENST00000507261 HECW2Q9P2P5 1572 aa12.77□□□□□ -0.36
RACK1-215ENST00000507261 KDM6BO15054 1643 aa12.77□□□□□ -0.36
RACK1-215ENST00000507261 MYT1LQ9UL68 1186 aa12.77□□□□□ -0.37
RACK1-215ENST00000507261 KIF15Q9NS87 1388 aa12.77□□□□□ -0.37
RACK1-215ENST00000507261 SETD5Q9C0A6 1442 aa12.77□□□□□ -0.37
RACK1-215ENST00000507261 GCC2Q8IWJ2 1684 aa12.75□□□□□ -0.37
RACK1-215ENST00000507261 DUOX2Q9NRD8 1548 aa12.74□□□□□ -0.37
RACK1-215ENST00000507261 YEATS2Q9ULM3 1422 aa12.74□□□□□ -0.37
RACK1-215ENST00000507261 ABCA6Q8N139 1617 aa12.73□□□□□ -0.37
RACK1-215ENST00000507261 DIP2CQ9Y2E4 1556 aa12.73□□□□□ -0.37
RACK1-215ENST00000507261 ANKRD50Q9ULJ7 1429 aa12.73□□□□□ -0.37
RACK1-215ENST00000507261 DHX29Q7Z478 1369 aaKnown RBP12.73□□□□□ -0.37
RACK1-215ENST00000507261 RAB3GAP2Q9H2M9 1393 aa12.73□□□□□ -0.37
RACK1-215ENST00000507261 HRCP23327 699 aa12.73□□□□□ -0.37
RACK1-215ENST00000507261 A2MP01023 1474 aa12.72□□□□□ -0.37
RACK1-215ENST00000507261 ATP10AO60312 1499 aa12.71□□□□□ -0.38
RACK1-215ENST00000507261 ERBINQ96RT1 1412 aa12.71□□□□□ -0.38
RACK1-215ENST00000507261 ARHGEF40Q8TER5 1519 aa12.7□□□□□ -0.38
RACK1-215ENST00000507261 REREQ9P2R6 1566 aa12.68□□□□□ -0.38
RACK1-215ENST00000507261 EIF2AK4Q9P2K8 1649 aaKnown RBP12.66□□□□□ -0.38
RACK1-215ENST00000507261 ACIN1Q9UKV3 1341 aaKnown RBP12.65□□□□□ -0.38
RACK1-215ENST00000507261 KIF3BO15066 747 aa12.65□□□□□ -0.38
RACK1-215ENST00000507261 BCORL1Q5H9F3 1711 aa12.65□□□□□ -0.38
RACK1-215ENST00000507261 AGLP35573 1532 aa12.64□□□□□ -0.39
RACK1-215ENST00000507261 SIGLEC1Q9BZZ2 1709 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms