RNA–Protein interactions for RNA: ENST00000504606.1

TRIO-206, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-206ENST00000504606 PLCH2O75038 1416 aa17.29■□□□□ 0.36
TRIO-206ENST00000504606 GLI2P10070 1586 aa17.28■□□□□ 0.36
TRIO-206ENST00000504606 TCOF1Q13428 1488 aaKnown RBP17.28■□□□□ 0.36
TRIO-206ENST00000504606 ZNF777Q9ULD5 760 aaPredicted RBP17.27■□□□□ 0.36
TRIO-206ENST00000504606 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.26■□□□□ 0.35
TRIO-206ENST00000504606 CD109Q6YHK3 1445 aa17.25■□□□□ 0.35
TRIO-206ENST00000504606 FAM69CQ0P6D2 419 aa17.25■□□□□ 0.35
TRIO-206ENST00000504606 ARAP3Q8WWN8 1544 aa17.25■□□□□ 0.35
TRIO-206ENST00000504606 CAMSAP2Q08AD1 1489 aa17.24■□□□□ 0.35
TRIO-206ENST00000504606 MAP3K4Q9Y6R4 1608 aa17.24■□□□□ 0.35
TRIO-206ENST00000504606 ZNF644Q9H582 1327 aaPredicted RBP17.23■□□□□ 0.35
TRIO-206ENST00000504606 SAMD9LQ8IVG5 1584 aa17.23■□□□□ 0.35
TRIO-206ENST00000504606 KIF13AQ9H1H9 1805 aa17.22■□□□□ 0.35
TRIO-206ENST00000504606 EFCAB2Q5VUJ9 269 aa17.22■□□□□ 0.35
TRIO-206ENST00000504606 ITGAEP38570 1179 aa17.21■□□□□ 0.35
TRIO-206ENST00000504606 FANCAO15360 1455 aa17.2■□□□□ 0.34
TRIO-206ENST00000504606 CFAP74Q9C0B2 1584 aa17.18■□□□□ 0.34
TRIO-206ENST00000504606 PLEKHH2Q8IVE3 1493 aa17.18■□□□□ 0.34
TRIO-206ENST00000504606 DNMT1P26358 1616 aaKnown RBP17.17■□□□□ 0.34
TRIO-206ENST00000504606 ABCC1P33527 1531 aa17.16■□□□□ 0.34
TRIO-206ENST00000504606 TSPOAP1O95153 1857 aa17.16■□□□□ 0.34
TRIO-206ENST00000504606 SYCP2Q9BX26 1530 aa17.16■□□□□ 0.34
TRIO-206ENST00000504606 DAPK1P53355 1430 aa17.15■□□□□ 0.34
TRIO-206ENST00000504606 HNRNPMP52272 730 aaKnown RBP eCLIP17.15■□□□□ 0.34
TRIO-206ENST00000504606 AKNAQ7Z591 1439 aa17.14■□□□□ 0.33
TRIO-206ENST00000504606 KIAA1107Q9UPP5 1409 aa17.14■□□□□ 0.33
TRIO-206ENST00000504606 ARHGEF5Q12774 1597 aa17.14■□□□□ 0.33
TRIO-206ENST00000504606 PPRC1Q5VV67 1664 aaKnown RBP17.13■□□□□ 0.33
TRIO-206ENST00000504606 ABCC5O15440 1437 aa17.13■□□□□ 0.33
TRIO-206ENST00000504606 ADGRL1O94910 1474 aa17.13■□□□□ 0.33
TRIO-206ENST00000504606 NEO1Q92859 1461 aa17.13■□□□□ 0.33
TRIO-206ENST00000504606 MBD5Q9P267 1494 aa17.13■□□□□ 0.33
TRIO-206ENST00000504606 PTPRKQ15262 1439 aa17.13■□□□□ 0.33
TRIO-206ENST00000504606 ARHGEF12Q9NZN5 1544 aa17.12■□□□□ 0.33
TRIO-206ENST00000504606 TRHP20396 242 aaPredicted RBP17.12■□□□□ 0.33
TRIO-206ENST00000504606 CCDC141Q6ZP82 1450 aa17.12■□□□□ 0.33
TRIO-206ENST00000504606 TEX14Q8IWB6 1497 aa17.12■□□□□ 0.33
TRIO-206ENST00000504606 CROCC2H7BZ55 1655 aa17.11■□□□□ 0.33
TRIO-206ENST00000504606 RSPH4AQ5TD94 716 aa17.1■□□□□ 0.33
TRIO-206ENST00000504606 SCAPERQ9BY12 1400 aa17.1■□□□□ 0.33
TRIO-206ENST00000504606 TRAPPC8Q9Y2L5 1435 aa17.08■□□□□ 0.32
TRIO-206ENST00000504606 CHIC2Q9UKJ5 165 aa17.08■□□□□ 0.32
TRIO-206ENST00000504606 SHANK2Q9UPX8 1470 aa17.07■□□□□ 0.32
TRIO-206ENST00000504606 TSPY4P0CV99 314 aa17.07■□□□□ 0.32
TRIO-206ENST00000504606 TSPY10P0CW01 314 aa17.07■□□□□ 0.32
TRIO-206ENST00000504606 C9orf84Q5VXU9 1444 aa17.05■□□□□ 0.32
TRIO-206ENST00000504606 ADGBQ8N7X0 1667 aa17.05■□□□□ 0.32
TRIO-206ENST00000504606 MAST1Q9Y2H9 1570 aa17.04■□□□□ 0.32
TRIO-206ENST00000504606 DENND4BO75064 1496 aaPredicted RBP17.04■□□□□ 0.32
TRIO-206ENST00000504606 AFAP1Q8N556 730 aa17.03■□□□□ 0.32
TRIO-206ENST00000504606 POGZQ7Z3K3 1410 aa17.03■□□□□ 0.32
TRIO-206ENST00000504606 ROCK1Q13464 1354 aa17.02■□□□□ 0.32
TRIO-206ENST00000504606 ADGRL2O95490 1459 aa17.02■□□□□ 0.32
TRIO-206ENST00000504606 ZNF518AQ6AHZ1 1483 aa17.02■□□□□ 0.32
TRIO-206ENST00000504606 RRP7BPQ9NSQ0 103 aa17.02■□□□□ 0.32
TRIO-206ENST00000504606 ANKRD30AQ9BXX3 1397 aa17.01■□□□□ 0.31
TRIO-206ENST00000504606 SPAG9O60271 1321 aaKnown RBP17■□□□□ 0.31
TRIO-206ENST00000504606 HFM1A2PYH4 1435 aa17■□□□□ 0.31
TRIO-206ENST00000504606 GCC2Q8IWJ2 1684 aa17■□□□□ 0.31
TRIO-206ENST00000504606 RICTORQ6R327 1708 aa16.99■□□□□ 0.31
TRIO-206ENST00000504606 NCOA1Q15788 1441 aa16.99■□□□□ 0.31
TRIO-206ENST00000504606 SETD5Q9C0A6 1442 aa16.99■□□□□ 0.31
TRIO-206ENST00000504606 KDM5CP41229 1560 aa16.98■□□□□ 0.31
TRIO-206ENST00000504606 NAIPQ13075 1403 aa16.98■□□□□ 0.31
TRIO-206ENST00000504606 ZFYVE16Q7Z3T8 1539 aa16.98■□□□□ 0.31
TRIO-206ENST00000504606 RAPGEF3O95398 923 aa16.98■□□□□ 0.31
TRIO-206ENST00000504606 MYT1LQ9UL68 1186 aa16.98■□□□□ 0.31
TRIO-206ENST00000504606 INO80Q9ULG1 1556 aaPredicted RBP16.98■□□□□ 0.31
TRIO-206ENST00000504606 RTEL1-TNFRSF6BF6WH68 1400 aa16.97■□□□□ 0.31
TRIO-206ENST00000504606 ATP7AQ04656 1500 aa16.97■□□□□ 0.31
TRIO-206ENST00000504606 RAB3GAP2Q9H2M9 1393 aa16.96■□□□□ 0.31
TRIO-206ENST00000504606 PLXNC1O60486 1568 aa16.96■□□□□ 0.31
TRIO-206ENST00000504606 FRMPD1Q5SYB0 1578 aa16.96■□□□□ 0.31
TRIO-206ENST00000504606 HECW2Q9P2P5 1572 aa16.95■□□□□ 0.3
TRIO-206ENST00000504606 KIF15Q9NS87 1388 aa16.95■□□□□ 0.3
TRIO-206ENST00000504606 KIDINS220Q9ULH0 1771 aa16.94■□□□□ 0.3
TRIO-206ENST00000504606 MLH3Q9UHC1 1453 aa16.93■□□□□ 0.3
TRIO-206ENST00000504606 COL17A1Q9UMD9 1497 aaPredicted RBP16.93■□□□□ 0.3
TRIO-206ENST00000504606 ZMYM4Q5VZL5 1548 aa16.91■□□□□ 0.3
TRIO-206ENST00000504606 KDM6BO15054 1643 aa16.91■□□□□ 0.3
TRIO-206ENST00000504606 ANKRD50Q9ULJ7 1429 aa16.9■□□□□ 0.3
TRIO-206ENST00000504606 DUOX2Q9NRD8 1548 aa16.9■□□□□ 0.3
TRIO-206ENST00000504606 ABCA6Q8N139 1617 aa16.88■□□□□ 0.29
TRIO-206ENST00000504606 HRCP23327 699 aa16.88■□□□□ 0.29
TRIO-206ENST00000504606 MAGI2Q86UL8 1455 aa16.86■□□□□ 0.29
TRIO-206ENST00000504606 DIP2CQ9Y2E4 1556 aa16.86■□□□□ 0.29
TRIO-206ENST00000504606 ERBINQ96RT1 1412 aa16.86■□□□□ 0.29
TRIO-206ENST00000504606 YEATS2Q9ULM3 1422 aa16.86■□□□□ 0.29
TRIO-206ENST00000504606 A2MP01023 1474 aa16.84■□□□□ 0.29
TRIO-206ENST00000504606 DHX29Q7Z478 1369 aaKnown RBP16.83■□□□□ 0.28
TRIO-206ENST00000504606 TRIM52Q96A61 297 aa16.82■□□□□ 0.28
TRIO-206ENST00000504606 ACIN1Q9UKV3 1341 aaKnown RBP16.81■□□□□ 0.28
TRIO-206ENST00000504606 ARHGEF40Q8TER5 1519 aa16.8■□□□□ 0.28
TRIO-206ENST00000504606 EIF2AK4Q9P2K8 1649 aaKnown RBP16.8■□□□□ 0.28
TRIO-206ENST00000504606 ATP10AO60312 1499 aa16.8■□□□□ 0.28
TRIO-206ENST00000504606 DHX57Q6P158 1386 aaKnown RBP16.78■□□□□ 0.28
TRIO-206ENST00000504606 UNC13BO14795 1591 aa16.78■□□□□ 0.28
TRIO-206ENST00000504606 CCER1Q8TC90 406 aaPredicted RBP16.78■□□□□ 0.28
TRIO-206ENST00000504606 KIF3BO15066 747 aa16.77■□□□□ 0.28
TRIO-206ENST00000504606 REREQ9P2R6 1566 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms