RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 PTPRGP23470 1445 aa14.39□□□□□ -0.11
ARHGEF28-206ENST00000504003 TTBK1Q5TCY1 1321 aaPredicted RBP14.38□□□□□ -0.11
ARHGEF28-206ENST00000504003 ATP1B4Q9UN42 357 aaPredicted RBP14.37□□□□□ -0.11
ARHGEF28-206ENST00000504003 FYCO1Q9BQS8 1478 aa14.36□□□□□ -0.11
ARHGEF28-206ENST00000504003 CASKIN1Q8WXD9 1431 aa14.35□□□□□ -0.11
ARHGEF28-206ENST00000504003 HECW1Q76N89 1606 aa14.33□□□□□ -0.11
ARHGEF28-206ENST00000504003 RAPGEF6Q8TEU7 1601 aa14.33□□□□□ -0.12
ARHGEF28-206ENST00000504003 ZRANB1Q9UGI0 708 aa14.32□□□□□ -0.12
ARHGEF28-206ENST00000504003 CCDC18Q5T9S5 1454 aa14.31□□□□□ -0.12
ARHGEF28-206ENST00000504003 PCF11O94913 1555 aaKnown RBP14.31□□□□□ -0.12
ARHGEF28-206ENST00000504003 PAK3O75914 559 aaPredicted RBP14.31□□□□□ -0.12
ARHGEF28-206ENST00000504003 ARHGEF11O15085 1522 aa14.31□□□□□ -0.12
ARHGEF28-206ENST00000504003 ERCC6L2Q5T890 1561 aa14.3□□□□□ -0.12
ARHGEF28-206ENST00000504003 ZNF579Q8NAF0 562 aaKnown RBP14.3□□□□□ -0.12
ARHGEF28-206ENST00000504003 NPM1P06748 294 aaKnown RBP eCLIP14.29□□□□□ -0.12
ARHGEF28-206ENST00000504003 UACAQ9BZF9 1416 aa14.29□□□□□ -0.12
ARHGEF28-206ENST00000504003 MAP3K1Q13233 1512 aa14.28□□□□□ -0.12
ARHGEF28-206ENST00000504003 CDK11AQ9UQ88 783 aaPredicted RBP14.28□□□□□ -0.12
ARHGEF28-206ENST00000504003 ABCA8O94911 1581 aa14.27□□□□□ -0.12
ARHGEF28-206ENST00000504003 PLB1Q6P1J6 1458 aa14.26□□□□□ -0.13
ARHGEF28-206ENST00000504003 RIMBP3CA6NJZ7 1639 aa14.26□□□□□ -0.13
ARHGEF28-206ENST00000504003 RIMBP3BA6NNM3 1639 aa14.26□□□□□ -0.13
ARHGEF28-206ENST00000504003 RIMBP3Q9UFD9 1639 aa14.26□□□□□ -0.13
ARHGEF28-206ENST00000504003 ABCC2Q92887 1545 aa14.25□□□□□ -0.13
ARHGEF28-206ENST00000504003 UHRF1BP1LA0JNW5 1464 aa14.25□□□□□ -0.13
ARHGEF28-206ENST00000504003 TIAM1Q13009 1591 aa14.23□□□□□ -0.13
ARHGEF28-206ENST00000504003 EPRSP07814 1512 aaKnown RBP14.23□□□□□ -0.13
ARHGEF28-206ENST00000504003 CFAP43Q8NDM7 1665 aa14.23□□□□□ -0.13
ARHGEF28-206ENST00000504003 DCBLD2Q96PD2 775 aa14.22□□□□□ -0.13
ARHGEF28-206ENST00000504003 NUP153P49790 1475 aaKnown RBP14.22□□□□□ -0.13
ARHGEF28-206ENST00000504003 LHX8Q68G74 356 aa14.21□□□□□ -0.13
ARHGEF28-206ENST00000504003 PROM2Q8N271 834 aa14.21□□□□□ -0.13
ARHGEF28-206ENST00000504003 PLEKHD1A6NEE1 506 aa14.19□□□□□ -0.14
ARHGEF28-206ENST00000504003 MTUS2Q5JR59 1369 aa14.19□□□□□ -0.14
ARHGEF28-206ENST00000504003 CYB5RLQ6IPT4 315 aa14.18□□□□□ -0.14
ARHGEF28-206ENST00000504003 LRRIQ1Q96JM4 1722 aa14.17□□□□□ -0.14
ARHGEF28-206ENST00000504003 EHBP1L1Q8N3D4 1523 aa14.16□□□□□ -0.14
ARHGEF28-206ENST00000504003 ARID3CA6NKF2 412 aa14.16□□□□□ -0.14
ARHGEF28-206ENST00000504003 ATP10BO94823 1461 aa14.16□□□□□ -0.14
ARHGEF28-206ENST00000504003 LRRC9Q6ZRR7 1453 aa14.16□□□□□ -0.14
ARHGEF28-206ENST00000504003 CDK13Q14004 1512 aaKnown RBP14.15□□□□□ -0.14
ARHGEF28-206ENST00000504003 KDM5BQ9UGL1 1544 aa14.15□□□□□ -0.14
ARHGEF28-206ENST00000504003 ADCY10Q96PN6 1610 aa14.15□□□□□ -0.14
ARHGEF28-206ENST00000504003 POTEIP0CG38 1075 aa14.14□□□□□ -0.15
ARHGEF28-206ENST00000504003 ZCCHC11Q5TAX3 1644 aaKnown RBP14.14□□□□□ -0.15
ARHGEF28-206ENST00000504003 MNX1P50219 401 aaPredicted RBP14.13□□□□□ -0.15
ARHGEF28-206ENST00000504003 SUPT6HQ7KZ85 1726 aaKnown RBP14.12□□□□□ -0.15
ARHGEF28-206ENST00000504003 PLEKHG5O94827 1062 aa14.11□□□□□ -0.15
ARHGEF28-206ENST00000504003 TROQ12816 1431 aaPredicted RBP14.11□□□□□ -0.15
ARHGEF28-206ENST00000504003 KANK4Q5T7N3 995 aaPredicted RBP14.11□□□□□ -0.15
ARHGEF28-206ENST00000504003 PPARGC1BQ86YN6 1023 aaKnown RBP14.11□□□□□ -0.15
ARHGEF28-206ENST00000504003 KIF14Q15058 1648 aa14.08□□□□□ -0.15
ARHGEF28-206ENST00000504003 GALR2O43603 387 aaPredicted RBP14.07□□□□□ -0.16
ARHGEF28-206ENST00000504003 PHF12Q96QT6 1004 aa14.06□□□□□ -0.16
ARHGEF28-206ENST00000504003 WDR7Q9Y4E6 1490 aa14.06□□□□□ -0.16
ARHGEF28-206ENST00000504003 ASXL2Q76L83 1435 aa14.04□□□□□ -0.16
ARHGEF28-206ENST00000504003 NCOA2Q15596 1464 aa14.04□□□□□ -0.16
ARHGEF28-206ENST00000504003 MAPKBP1O60336 1514 aa14.04□□□□□ -0.16
ARHGEF28-206ENST00000504003 MAGI3Q5TCQ9 1506 aa14.04□□□□□ -0.16
ARHGEF28-206ENST00000504003 TRIM26Q12899 539 aaPredicted RBP14.03□□□□□ -0.16
ARHGEF28-206ENST00000504003 KCNH8Q96L42 1107 aa14.03□□□□□ -0.16
ARHGEF28-206ENST00000504003 CCNB3Q8WWL7 1395 aa14.03□□□□□ -0.16
ARHGEF28-206ENST00000504003 ITSN2Q9NZM3 1697 aa14.02□□□□□ -0.16
ARHGEF28-206ENST00000504003 MYOM3Q5VTT5 1437 aa13.98□□□□□ -0.17
ARHGEF28-206ENST00000504003 MIA2Q96PC5 1412 aa13.98□□□□□ -0.17
ARHGEF28-206ENST00000504003 MIER1Q8N108 512 aa13.97□□□□□ -0.17
ARHGEF28-206ENST00000504003 MYO5CQ9NQX4 1742 aa13.96□□□□□ -0.17
ARHGEF28-206ENST00000504003 CFDP1Q9UEE9 299 aaPredicted RBP13.96□□□□□ -0.17
ARHGEF28-206ENST00000504003 PHLDB1Q86UU1 1377 aa13.96□□□□□ -0.18
ARHGEF28-206ENST00000504003 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.95□□□□□ -0.18
ARHGEF28-206ENST00000504003 ABCC10Q5T3U5 1492 aa13.94□□□□□ -0.18
ARHGEF28-206ENST00000504003 ABCA9Q8IUA7 1624 aa13.94□□□□□ -0.18
ARHGEF28-206ENST00000504003 FGD6Q6ZV73 1430 aa13.94□□□□□ -0.18
ARHGEF28-206ENST00000504003 TSPYL2Q9H2G4 693 aaPredicted RBP13.94□□□□□ -0.18
ARHGEF28-206ENST00000504003 CDC42BPAQ5VT25 1732 aa13.93□□□□□ -0.18
ARHGEF28-206ENST00000504003 RRBP1Q9P2E9 1410 aaKnown RBP13.93□□□□□ -0.18
ARHGEF28-206ENST00000504003 FAM50AQ14320 339 aaKnown RBP13.93□□□□□ -0.18
ARHGEF28-206ENST00000504003 GPATCH8Q9UKJ3 1502 aaKnown RBP13.92□□□□□ -0.18
ARHGEF28-206ENST00000504003 PREX2Q70Z35 1606 aa13.92□□□□□ -0.18
ARHGEF28-206ENST00000504003 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.92□□□□□ -0.181e-8■■□□□ 13.6
ARHGEF28-206ENST00000504003 GLI2P10070 1586 aa13.92□□□□□ -0.18
ARHGEF28-206ENST00000504003 TTC37Q6PGP7 1564 aa13.92□□□□□ -0.18
ARHGEF28-206ENST00000504003 ARHGAP5Q13017 1502 aa13.91□□□□□ -0.18
ARHGEF28-206ENST00000504003 ARAP3Q8WWN8 1544 aa13.91□□□□□ -0.18
ARHGEF28-206ENST00000504003 EFCAB2Q5VUJ9 269 aa13.91□□□□□ -0.18
ARHGEF28-206ENST00000504003 PLCH2O75038 1416 aa13.9□□□□□ -0.18
ARHGEF28-206ENST00000504003 PTPN23Q9H3S7 1636 aa13.9□□□□□ -0.18
ARHGEF28-206ENST00000504003 CFAP74Q9C0B2 1584 aa13.9□□□□□ -0.18
ARHGEF28-206ENST00000504003 CD109Q6YHK3 1445 aa13.9□□□□□ -0.19
ARHGEF28-206ENST00000504003 PLEKHH2Q8IVE3 1493 aa13.89□□□□□ -0.19
ARHGEF28-206ENST00000504003 FAM69CQ0P6D2 419 aa13.89□□□□□ -0.19
ARHGEF28-206ENST00000504003 PLCD3Q8N3E9 789 aa13.89□□□□□ -0.19
ARHGEF28-206ENST00000504003 MS4A3Q96HJ5 214 aa13.89□□□□□ -0.19
ARHGEF28-206ENST00000504003 ZNF777Q9ULD5 760 aaPredicted RBP13.89□□□□□ -0.19
ARHGEF28-206ENST00000504003 CDC42BPBQ9Y5S2 1711 aa13.88□□□□□ -0.19
ARHGEF28-206ENST00000504003 DIP2BQ9P265 1576 aa13.88□□□□□ -0.19
ARHGEF28-206ENST00000504003 RSPH4AQ5TD94 716 aa13.87□□□□□ -0.19
ARHGEF28-206ENST00000504003 ZBTB47Q9UFB7 747 aaPredicted RBP13.87□□□□□ -0.19
ARHGEF28-206ENST00000504003 TCOF1Q13428 1488 aaKnown RBP13.87□□□□□ -0.19
ARHGEF28-206ENST00000504003 PCGF6Q9BYE7 350 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms