RNA–Protein interactions for RNA: ENST00000501520.1

AC138904.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC138904.1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138904.1-201ENST00000501520 VPS8Q8N3P4 1428 aa12.66□□□□□ -0.38
AC138904.1-201ENST00000501520 TOPBP1Q92547 1522 aa12.66□□□□□ -0.38
AC138904.1-201ENST00000501520 DNMBPQ6XZF7 1577 aa12.64□□□□□ -0.39
AC138904.1-201ENST00000501520 CARMIL1Q5VZK9 1371 aa12.63□□□□□ -0.39
AC138904.1-201ENST00000501520 POLA1P09884 1462 aaPredicted RBP12.63□□□□□ -0.39
AC138904.1-201ENST00000501520 HS6ST3Q8IZP7 471 aa12.63□□□□□ -0.39
AC138904.1-201ENST00000501520 RNF25Q96BH1 459 aaPredicted RBP12.63□□□□□ -0.39
AC138904.1-201ENST00000501520 PDS5BQ9NTI5 1447 aa12.62□□□□□ -0.39
AC138904.1-201ENST00000501520 LMOD2Q6P5Q4 547 aa12.62□□□□□ -0.39
AC138904.1-201ENST00000501520 URB2Q14146 1524 aaKnown RBP12.61□□□□□ -0.39
AC138904.1-201ENST00000501520 GTPBP6O43824 516 aaPredicted RBP12.6□□□□□ -0.39
AC138904.1-201ENST00000501520 NEUROD2Q15784 382 aa12.59□□□□□ -0.39
AC138904.1-201ENST00000501520 PLCD3Q8N3E9 789 aa12.59□□□□□ -0.39
AC138904.1-201ENST00000501520 ARID3AQ99856 593 aa12.59□□□□□ -0.39
AC138904.1-201ENST00000501520 BRPF3Q9ULD4 1205 aa12.58□□□□□ -0.4
AC138904.1-201ENST00000501520 ARAP1Q96P48 1450 aa12.58□□□□□ -0.4
AC138904.1-201ENST00000501520 ABCA10Q8WWZ4 1543 aa12.58□□□□□ -0.4
AC138904.1-201ENST00000501520 GLIPR1L2Q4G1C9 344 aa12.57□□□□□ -0.4
AC138904.1-201ENST00000501520 CCDC9Q9Y3X0 531 aaKnown RBP12.57□□□□□ -0.4
AC138904.1-201ENST00000501520 TDRD9Q8NDG6 1382 aaKnown RBP12.56□□□□□ -0.4
AC138904.1-201ENST00000501520 ARHGAP35Q9NRY4 1499 aa12.54□□□□□ -0.4
AC138904.1-201ENST00000501520 CCER1Q8TC90 406 aaPredicted RBP12.54□□□□□ -0.4
AC138904.1-201ENST00000501520 KIF21AQ7Z4S6 1674 aa12.54□□□□□ -0.4
AC138904.1-201ENST00000501520 KANK4Q5T7N3 995 aaPredicted RBP12.52□□□□□ -0.4
AC138904.1-201ENST00000501520 NAP1L2Q9ULW6 460 aaPredicted RBP12.52□□□□□ -0.41
AC138904.1-201ENST00000501520 HMGB1P09429 215 aaKnown RBP12.51□□□□□ -0.41
AC138904.1-201ENST00000501520 P3H3Q8IVL6 736 aa12.51□□□□□ -0.41
AC138904.1-201ENST00000501520 PUS7Q96PZ0 661 aaKnown RBP12.48□□□□□ -0.41
AC138904.1-201ENST00000501520 ZFP91Q96JP5 570 aaPredicted RBP12.48□□□□□ -0.41
AC138904.1-201ENST00000501520 MYT1LQ9UL68 1186 aa12.48□□□□□ -0.41
AC138904.1-201ENST00000501520 MIER1Q8N108 512 aa12.47□□□□□ -0.41
AC138904.1-201ENST00000501520 SLC24A3Q9HC58 644 aa12.47□□□□□ -0.41
AC138904.1-201ENST00000501520 KCNV2Q8TDN2 545 aa12.47□□□□□ -0.41
AC138904.1-201ENST00000501520 GAPVD1Q14C86 1478 aa12.46□□□□□ -0.41
AC138904.1-201ENST00000501520 TMED8Q6PL24 325 aaPredicted RBP12.46□□□□□ -0.42
AC138904.1-201ENST00000501520 C1orf115Q9H7X2 142 aa12.45□□□□□ -0.42
AC138904.1-201ENST00000501520 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.45□□□□□ -0.42
AC138904.1-201ENST00000501520 ERCC6Q03468 1493 aa12.45□□□□□ -0.42
AC138904.1-201ENST00000501520 PRDM10Q9NQV6 1147 aa12.44□□□□□ -0.42
AC138904.1-201ENST00000501520 THOC2Q8NI27 1593 aaKnown RBP12.43□□□□□ -0.42
AC138904.1-201ENST00000501520 TICAM2Q86XR7 235 aa12.43□□□□□ -0.42
AC138904.1-201ENST00000501520 CNPY4Q8N129 248 aa12.43□□□□□ -0.42
AC138904.1-201ENST00000501520 WDR97A6NE52 1622 aa12.43□□□□□ -0.42
AC138904.1-201ENST00000501520 MRC2Q9UBG0 1479 aa12.43□□□□□ -0.42
AC138904.1-201ENST00000501520 POLA2Q14181 598 aa12.43□□□□□ -0.42
AC138904.1-201ENST00000501520 ZNF592Q92610 1267 aa12.43□□□□□ -0.42
AC138904.1-201ENST00000501520 ATP1B4Q9UN42 357 aaPredicted RBP12.42□□□□□ -0.42
AC138904.1-201ENST00000501520 ABCA5Q8WWZ7 1642 aa12.41□□□□□ -0.42
AC138904.1-201ENST00000501520 CUL7Q14999 1698 aa12.41□□□□□ -0.42
AC138904.1-201ENST00000501520 WDR62O43379 1518 aa12.41□□□□□ -0.42
AC138904.1-201ENST00000501520 AQRO60306 1485 aaKnown RBP eCLIP12.41□□□□□ -0.42
AC138904.1-201ENST00000501520 TARBP1Q13395 1621 aaKnown RBP12.4□□□□□ -0.42
AC138904.1-201ENST00000501520 ZC3H15Q8WU90 426 aaKnown RBP12.39□□□□□ -0.43
AC138904.1-201ENST00000501520 FHOD3Q2V2M9 1422 aa12.39□□□□□ -0.43
AC138904.1-201ENST00000501520 CHMP4BQ9H444 224 aaKnown RBP12.39□□□□□ -0.43
AC138904.1-201ENST00000501520 NCLP19338 710 aaKnown RBP12.37□□□□□ -0.43
AC138904.1-201ENST00000501520 ARID3CA6NKF2 412 aa12.36□□□□□ -0.43
AC138904.1-201ENST00000501520 SECISBP2LQ93073 1101 aaKnown RBP12.36□□□□□ -0.43
AC138904.1-201ENST00000501520 FHAD1B1AJZ9 1412 aa12.36□□□□□ -0.43
AC138904.1-201ENST00000501520 TEX2Q8IWB9 1127 aa12.35□□□□□ -0.43
AC138904.1-201ENST00000501520 CHRM1P11229 460 aaPredicted RBP12.34□□□□□ -0.43
AC138904.1-201ENST00000501520 IPO4Q8TEX9 1081 aaKnown RBP12.34□□□□□ -0.43
AC138904.1-201ENST00000501520 ZNF608Q9ULD9 1512 aaPredicted RBP12.34□□□□□ -0.43
AC138904.1-201ENST00000501520 STK25O00506 426 aa12.33□□□□□ -0.44
AC138904.1-201ENST00000501520 ITGAEP38570 1179 aa12.32□□□□□ -0.44
AC138904.1-201ENST00000501520 TIAM1Q13009 1591 aa12.31□□□□□ -0.44
AC138904.1-201ENST00000501520 CTTNBP2Q8WZ74 1663 aa12.31□□□□□ -0.44
AC138904.1-201ENST00000501520 EFCAB5A4FU69 1503 aa12.31□□□□□ -0.44
AC138904.1-201ENST00000501520 CADPS2Q86UW7 1296 aa12.31□□□□□ -0.44
AC138904.1-201ENST00000501520 RRBP1Q9P2E9 1410 aaKnown RBP12.31□□□□□ -0.44
AC138904.1-201ENST00000501520 IFT140Q96RY7 1462 aa12.3□□□□□ -0.44
AC138904.1-201ENST00000501520 PCF11O94913 1555 aaKnown RBP12.3□□□□□ -0.44
AC138904.1-201ENST00000501520 CCNB3Q8WWL7 1395 aa12.3□□□□□ -0.44
AC138904.1-201ENST00000501520 LRRC9Q6ZRR7 1453 aa12.3□□□□□ -0.44
AC138904.1-201ENST00000501520 GRIN2BQ13224 1484 aa12.29□□□□□ -0.44
AC138904.1-201ENST00000501520 MAP3K1Q13233 1512 aa12.29□□□□□ -0.44
AC138904.1-201ENST00000501520 NECTIN2Q92692 538 aa12.29□□□□□ -0.44
AC138904.1-201ENST00000501520 SPINK5Q9NQ38 1064 aaPredicted RBP12.29□□□□□ -0.44
AC138904.1-201ENST00000501520 CLSTN1O94985 981 aa12.28□□□□□ -0.44
AC138904.1-201ENST00000501520 GPBP1L1Q9HC44 474 aaPredicted RBP12.28□□□□□ -0.44
AC138904.1-201ENST00000501520 STAG3Q9UJ98 1225 aa12.28□□□□□ -0.44
AC138904.1-201ENST00000501520 CASKIN1Q8WXD9 1431 aa12.28□□□□□ -0.44
AC138904.1-201ENST00000501520 FMN1Q68DA7 1419 aa12.27□□□□□ -0.44
AC138904.1-201ENST00000501520 KCNG1Q9UIX4 513 aa12.27□□□□□ -0.45
AC138904.1-201ENST00000501520 PBRM1Q86U86 1689 aa12.27□□□□□ -0.45
AC138904.1-201ENST00000501520 PHLDB1Q86UU1 1377 aa12.27□□□□□ -0.45
AC138904.1-201ENST00000501520 FYCO1Q9BQS8 1478 aa12.26□□□□□ -0.45
AC138904.1-201ENST00000501520 WWC1Q8IX03 1113 aa12.25□□□□□ -0.45
AC138904.1-201ENST00000501520 ADAMTS12P58397 1594 aa12.24□□□□□ -0.45
AC138904.1-201ENST00000501520 FAM50AQ14320 339 aaKnown RBP12.24□□□□□ -0.45
AC138904.1-201ENST00000501520 CERS3Q8IU89 383 aa12.23□□□□□ -0.45
AC138904.1-201ENST00000501520 ZNF692Q9BU19 519 aaPredicted RBP12.23□□□□□ -0.45
AC138904.1-201ENST00000501520 SAMD9Q5K651 1589 aa12.23□□□□□ -0.45
AC138904.1-201ENST00000501520 SNAPC4Q5SXM2 1469 aa12.23□□□□□ -0.45
AC138904.1-201ENST00000501520 IL27Q8NEV9 243 aa12.22□□□□□ -0.45
AC138904.1-201ENST00000501520 RIOK3O14730 519 aaKnown RBP12.21□□□□□ -0.45
AC138904.1-201ENST00000501520 PSMD1Q99460 953 aa12.2□□□□□ -0.46
AC138904.1-201ENST00000501520 CFAP43Q8NDM7 1665 aa12.2□□□□□ -0.46
AC138904.1-201ENST00000501520 FTSJ3Q8IY81 847 aaKnown RBP12.2□□□□□ -0.46
AC138904.1-201ENST00000501520 IQGAP2Q13576 1575 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms