RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 POLA1P09884 1462 aaPredicted RBP12.75□□□□□ -0.37
FN1-227ENST00000498719 DNMBPQ6XZF7 1577 aa12.75□□□□□ -0.37
FN1-227ENST00000498719 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
FN1-227ENST00000498719 FHOD3Q2V2M9 1422 aa12.74□□□□□ -0.37
FN1-227ENST00000498719 TOPBP1Q92547 1522 aa12.74□□□□□ -0.37
FN1-227ENST00000498719 FAM50AQ14320 339 aaKnown RBP12.74□□□□□ -0.37
FN1-227ENST00000498719 MAP3K1Q13233 1512 aa12.74□□□□□ -0.37
FN1-227ENST00000498719 SLC24A3Q9HC58 644 aa12.73□□□□□ -0.37
FN1-227ENST00000498719 BRD2P25440 801 aaKnown RBP12.72□□□□□ -0.37
FN1-227ENST00000498719 MAPKBP1O60336 1514 aa12.72□□□□□ -0.37
FN1-227ENST00000498719 ABCA10Q8WWZ4 1543 aa12.72□□□□□ -0.37
FN1-227ENST00000498719 FOXD4L5Q5VV16 416 aaPredicted RBP12.72□□□□□ -0.37
FN1-227ENST00000498719 FOXD4L4Q8WXT5 416 aaPredicted RBP12.72□□□□□ -0.37
FN1-227ENST00000498719 FHAD1B1AJZ9 1412 aa12.72□□□□□ -0.37
FN1-227ENST00000498719 CFAP43Q8NDM7 1665 aa12.71□□□□□ -0.37
FN1-227ENST00000498719 SETD5Q9C0A6 1442 aa12.69□□□□□ -0.38
FN1-227ENST00000498719 RBM25P49756 843 aaKnown RBP12.68□□□□□ -0.38
FN1-227ENST00000498719 SIN3AQ96ST3 1273 aa12.67□□□□□ -0.38
FN1-227ENST00000498719 CTTNBP2Q8WZ74 1663 aa12.67□□□□□ -0.38
FN1-227ENST00000498719 URB2Q14146 1524 aaKnown RBP12.66□□□□□ -0.38
FN1-227ENST00000498719 TDRD9Q8NDG6 1382 aaKnown RBP12.65□□□□□ -0.38
FN1-227ENST00000498719 CUL7Q14999 1698 aa12.65□□□□□ -0.38
FN1-227ENST00000498719 FYCO1Q9BQS8 1478 aa12.64□□□□□ -0.39
FN1-227ENST00000498719 RNF216Q9NWF9 866 aaPredicted RBP12.63□□□□□ -0.39
FN1-227ENST00000498719 CASKIN1Q8WXD9 1431 aa12.63□□□□□ -0.39
FN1-227ENST00000498719 EFCAB5A4FU69 1503 aa12.63□□□□□ -0.39
FN1-227ENST00000498719 ZC3H15Q8WU90 426 aaKnown RBP12.62□□□□□ -0.39
FN1-227ENST00000498719 SPOCK2Q92563 424 aa12.62□□□□□ -0.39
FN1-227ENST00000498719 WDR97A6NE52 1622 aa12.62□□□□□ -0.39
FN1-227ENST00000498719 LAMC3Q9Y6N6 1575 aa12.6□□□□□ -0.39
FN1-227ENST00000498719 LRRIQ1Q96JM4 1722 aa12.6□□□□□ -0.39
FN1-227ENST00000498719 SNAPC4Q5SXM2 1469 aa12.59□□□□□ -0.39
FN1-227ENST00000498719 NKX1-1Q15270 411 aaPredicted RBP12.59□□□□□ -0.39
FN1-227ENST00000498719 KCNH8Q96L42 1107 aa12.59□□□□□ -0.39
FN1-227ENST00000498719 AQRO60306 1485 aaKnown RBP eCLIP12.58□□□□□ -0.391e-46■■■■■ 36
FN1-227ENST00000498719 ABCA5Q8WWZ7 1642 aa12.58□□□□□ -0.4
FN1-227ENST00000498719 FMN1Q68DA7 1419 aa12.57□□□□□ -0.4
FN1-227ENST00000498719 GAPVD1Q14C86 1478 aa12.57□□□□□ -0.4
FN1-227ENST00000498719 AEBP1Q8IUX7 1158 aa12.57□□□□□ -0.4
FN1-227ENST00000498719 HIRIP3Q9BW71 556 aaPredicted RBP12.57□□□□□ -0.4
FN1-227ENST00000498719 FGD6Q6ZV73 1430 aa12.57□□□□□ -0.4
FN1-227ENST00000498719 CCDC82Q8N4S0 544 aa12.56□□□□□ -0.4
FN1-227ENST00000498719 POLR3GLQ9BT43 218 aa12.56□□□□□ -0.4
FN1-227ENST00000498719 MTUS2Q5JR59 1369 aa12.56□□□□□ -0.4
FN1-227ENST00000498719 KIF21AQ7Z4S6 1674 aa12.56□□□□□ -0.4
FN1-227ENST00000498719 SAMD9Q5K651 1589 aa12.54□□□□□ -0.4
FN1-227ENST00000498719 PTPRKQ15262 1439 aa12.54□□□□□ -0.4
FN1-227ENST00000498719 MKRN3Q13064 507 aaKnown RBP12.54□□□□□ -0.4
FN1-227ENST00000498719 DDX10Q13206 875 aaKnown RBP12.54□□□□□ -0.4
FN1-227ENST00000498719 PDE4CQ08493 712 aa12.53□□□□□ -0.4
FN1-227ENST00000498719 PDS5BQ9NTI5 1447 aa12.52□□□□□ -0.4
FN1-227ENST00000498719 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.52□□□□□ -0.41
FN1-227ENST00000498719 GTPBP6O43824 516 aaPredicted RBP12.51□□□□□ -0.41
FN1-227ENST00000498719 MFAP1P55081 439 aaKnown RBP12.51□□□□□ -0.41
FN1-227ENST00000498719 IL27Q8NEV9 243 aa12.51□□□□□ -0.41
FN1-227ENST00000498719 GRIN2BQ13224 1484 aa12.51□□□□□ -0.41
FN1-227ENST00000498719 GPBP1L1Q9HC44 474 aaPredicted RBP12.5□□□□□ -0.41
FN1-227ENST00000498719 NCOA2Q15596 1464 aa12.5□□□□□ -0.41
FN1-227ENST00000498719 CCDC18Q5T9S5 1454 aa12.5□□□□□ -0.41
FN1-227ENST00000498719 HS6ST3Q8IZP7 471 aa12.5□□□□□ -0.41
FN1-227ENST00000498719 PPP1R15AO75807 674 aaPredicted RBP12.49□□□□□ -0.41
FN1-227ENST00000498719 TARBP1Q13395 1621 aaKnown RBP12.49□□□□□ -0.41
FN1-227ENST00000498719 ZNF692Q9BU19 519 aaPredicted RBP12.49□□□□□ -0.41
FN1-227ENST00000498719 SUPT16HQ9Y5B9 1047 aaKnown RBP12.48□□□□□ -0.41
FN1-227ENST00000498719 TMCO4Q5TGY1 634 aa12.48□□□□□ -0.41
FN1-227ENST00000498719 KCNV2Q8TDN2 545 aa12.48□□□□□ -0.41
FN1-227ENST00000498719 USP35Q9P2H5 1018 aa12.48□□□□□ -0.41
FN1-227ENST00000498719 MAGI3Q5TCQ9 1506 aa12.48□□□□□ -0.41
FN1-227ENST00000498719 MYOM3Q5VTT5 1437 aa12.47□□□□□ -0.41
FN1-227ENST00000498719 PTPN23Q9H3S7 1636 aa12.47□□□□□ -0.41
FN1-227ENST00000498719 HFM1A2PYH4 1435 aa12.47□□□□□ -0.41
FN1-227ENST00000498719 SUPT6HQ7KZ85 1726 aaKnown RBP12.46□□□□□ -0.41
FN1-227ENST00000498719 NAIPQ13075 1403 aa12.45□□□□□ -0.42
FN1-227ENST00000498719 FAM177A1Q8N128 213 aaPredicted RBP12.45□□□□□ -0.42
FN1-227ENST00000498719 TRAIPQ9BWF2 469 aa12.45□□□□□ -0.42
FN1-227ENST00000498719 CHIC2Q9UKJ5 165 aa12.45□□□□□ -0.42
FN1-227ENST00000498719 PBRM1Q86U86 1689 aa12.44□□□□□ -0.42
FN1-227ENST00000498719 UACAQ9BZF9 1416 aa12.44□□□□□ -0.42
FN1-227ENST00000498719 TONSLQ96HA7 1378 aa12.44□□□□□ -0.42
FN1-227ENST00000498719 EHBP1L1Q8N3D4 1523 aa12.44□□□□□ -0.42
FN1-227ENST00000498719 GZF1Q9H116 711 aaPredicted RBP12.43□□□□□ -0.42
FN1-227ENST00000498719 RRP7BPQ9NSQ0 103 aa12.43□□□□□ -0.42
FN1-227ENST00000498719 TAF7LQ5H9L4 462 aa12.43□□□□□ -0.42
FN1-227ENST00000498719 UGGT2Q9NYU1 1516 aa12.43□□□□□ -0.42
FN1-227ENST00000498719 THOC2Q8NI27 1593 aaKnown RBP12.42□□□□□ -0.42
FN1-227ENST00000498719 CDK13Q14004 1512 aaKnown RBP12.41□□□□□ -0.42
FN1-227ENST00000498719 ARHGEF11O15085 1522 aa12.4□□□□□ -0.42
FN1-227ENST00000498719 IQGAP2Q13576 1575 aa12.4□□□□□ -0.42
FN1-227ENST00000498719 BCL11AQ9H165 835 aa12.4□□□□□ -0.42
FN1-227ENST00000498719 EPRSP07814 1512 aaKnown RBP12.38□□□□□ -0.43
FN1-227ENST00000498719 ADAMTS12P58397 1594 aa12.38□□□□□ -0.43
FN1-227ENST00000498719 KDM6BO15054 1643 aa12.38□□□□□ -0.43
FN1-227ENST00000498719 HECW1Q76N89 1606 aa12.38□□□□□ -0.43
FN1-227ENST00000498719 E9PSI1 815 aa12.37□□□□□ -0.43
FN1-227ENST00000498719 MKRN4PQ13434 485 aaPredicted RBP12.36□□□□□ -0.43
FN1-227ENST00000498719 KDM5BQ9UGL1 1544 aa12.36□□□□□ -0.43
FN1-227ENST00000498719 ZNF608Q9ULD9 1512 aaPredicted RBP12.36□□□□□ -0.43
FN1-227ENST00000498719 TRIM52Q96A61 297 aa12.36□□□□□ -0.43
FN1-227ENST00000498719 DENND4BO75064 1496 aaPredicted RBP12.35□□□□□ -0.43
FN1-227ENST00000498719 ANP32CO43423 234 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms