RNA–Protein interactions for RNA: ENST00000497053.2

LAMA5-213, Transcript of laminin subunit alpha 5, humanhuman

TSL 3

Gene LAMA5, Length 723 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-213ENST00000497053 CFAP74Q9C0B2 1584 aa22.92■■□□□ 1.26
LAMA5-213ENST00000497053 FRMPD1Q5SYB0 1578 aa22.91■■□□□ 1.26
LAMA5-213ENST00000497053 RRBP1Q9P2E9 1410 aaKnown RBP22.91■■□□□ 1.26
LAMA5-213ENST00000497053 TTC37Q6PGP7 1564 aa22.9■■□□□ 1.26
LAMA5-213ENST00000497053 PCGF6Q9BYE7 350 aa22.89■■□□□ 1.25
LAMA5-213ENST00000497053 ITSN2Q9NZM3 1697 aa22.89■■□□□ 1.25
LAMA5-213ENST00000497053 FANCAO15360 1455 aa22.88■■□□□ 1.25
LAMA5-213ENST00000497053 MYOM3Q5VTT5 1437 aa22.88■■□□□ 1.25
LAMA5-213ENST00000497053 CDC42BPAQ5VT25 1732 aa22.88■■□□□ 1.25
LAMA5-213ENST00000497053 FGD6Q6ZV73 1430 aa22.86■■□□□ 1.25
LAMA5-213ENST00000497053 DENND4BO75064 1496 aaPredicted RBP22.85■■□□□ 1.25
LAMA5-213ENST00000497053 AKNAQ7Z591 1439 aa22.85■■□□□ 1.25
LAMA5-213ENST00000497053 PTPN23Q9H3S7 1636 aa22.83■■□□□ 1.25
LAMA5-213ENST00000497053 CCNB3Q8WWL7 1395 aa22.83■■□□□ 1.25
LAMA5-213ENST00000497053 HECW2Q9P2P5 1572 aa22.83■■□□□ 1.25
LAMA5-213ENST00000497053 RICTORQ6R327 1708 aa22.82■■□□□ 1.24
LAMA5-213ENST00000497053 ARHGEF40Q8TER5 1519 aa22.82■■□□□ 1.24
LAMA5-213ENST00000497053 PREX2Q70Z35 1606 aa22.81■■□□□ 1.24
LAMA5-213ENST00000497053 MYO5CQ9NQX4 1742 aa22.8■■□□□ 1.24
LAMA5-213ENST00000497053 GPATCH8Q9UKJ3 1502 aaKnown RBP22.78■■□□□ 1.24
LAMA5-213ENST00000497053 ADAMTSL3P82987 1691 aa22.78■■□□□ 1.24
LAMA5-213ENST00000497053 CDC42BPBQ9Y5S2 1711 aa22.77■■□□□ 1.24
LAMA5-213ENST00000497053 PLCH2O75038 1416 aa22.77■■□□□ 1.24
LAMA5-213ENST00000497053 TCOF1Q13428 1488 aaKnown RBP22.76■■□□□ 1.23
LAMA5-213ENST00000497053 ZMYM4Q5VZL5 1548 aa22.76■■□□□ 1.23
LAMA5-213ENST00000497053 ARID4BQ4LE39 1312 aaPredicted RBP22.76■■□□□ 1.23
LAMA5-213ENST00000497053 BCORL1Q5H9F3 1711 aa22.75■■□□□ 1.23
LAMA5-213ENST00000497053 MIA2Q96PC5 1412 aa22.74■■□□□ 1.23
LAMA5-213ENST00000497053 ZFYVE16Q7Z3T8 1539 aa22.72■■□□□ 1.23
LAMA5-213ENST00000497053 PTPRMP28827 1452 aa22.72■■□□□ 1.23
LAMA5-213ENST00000497053 SCAPERQ9BY12 1400 aa22.71■■□□□ 1.23
LAMA5-213ENST00000497053 FAM50AQ14320 339 aaKnown RBP22.7■■□□□ 1.22
LAMA5-213ENST00000497053 POGZQ7Z3K3 1410 aa22.7■■□□□ 1.22
LAMA5-213ENST00000497053 CAMSAP2Q08AD1 1489 aa22.7■■□□□ 1.22
LAMA5-213ENST00000497053 MADDQ8WXG6 1647 aa22.7■■□□□ 1.22
LAMA5-213ENST00000497053 MAGI2Q86UL8 1455 aa22.69■■□□□ 1.22
LAMA5-213ENST00000497053 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.68■■□□□ 1.229e-7■■■■■ 28.4
LAMA5-213ENST00000497053 EFCAB2Q5VUJ9 269 aa22.68■■□□□ 1.22
LAMA5-213ENST00000497053 SAMD9LQ8IVG5 1584 aa22.67■■□□□ 1.22
LAMA5-213ENST00000497053 YEATS2Q9ULM3 1422 aa22.67■■□□□ 1.22
LAMA5-213ENST00000497053 ARHGAP5Q13017 1502 aa22.67■■□□□ 1.22
LAMA5-213ENST00000497053 DNMT1P26358 1616 aaKnown RBP22.64■■□□□ 1.21
LAMA5-213ENST00000497053 CROCC2H7BZ55 1655 aa22.63■■□□□ 1.21
LAMA5-213ENST00000497053 CFDP1Q9UEE9 299 aaPredicted RBP22.63■■□□□ 1.21
LAMA5-213ENST00000497053 ZNF644Q9H582 1327 aaPredicted RBP22.62■■□□□ 1.21
LAMA5-213ENST00000497053 RIMS1Q86UR5 1692 aaKnown RBP22.62■■□□□ 1.21
LAMA5-213ENST00000497053 SIGLEC1Q9BZZ2 1709 aa22.6■■□□□ 1.21
LAMA5-213ENST00000497053 ITGAEP38570 1179 aa22.6■■□□□ 1.21
LAMA5-213ENST00000497053 ZNF518AQ6AHZ1 1483 aa22.6■■□□□ 1.21
LAMA5-213ENST00000497053 PTPRKQ15262 1439 aa22.57■■□□□ 1.2
LAMA5-213ENST00000497053 ZNF777Q9ULD5 760 aaPredicted RBP22.57■■□□□ 1.2
LAMA5-213ENST00000497053 SYCP2Q9BX26 1530 aa22.57■■□□□ 1.2
LAMA5-213ENST00000497053 ATP10AO60312 1499 aa22.56■■□□□ 1.2
LAMA5-213ENST00000497053 ABCC1P33527 1531 aa22.56■■□□□ 1.2
LAMA5-213ENST00000497053 C9orf84Q5VXU9 1444 aa22.56■■□□□ 1.2
LAMA5-213ENST00000497053 DAPK1P53355 1430 aa22.55■■□□□ 1.2
LAMA5-213ENST00000497053 KDM5CP41229 1560 aa22.55■■□□□ 1.2
LAMA5-213ENST00000497053 ARHGEF5Q12774 1597 aa22.54■■□□□ 1.2
LAMA5-213ENST00000497053 ADGBQ8N7X0 1667 aa22.53■■□□□ 1.2
LAMA5-213ENST00000497053 MLECQ14165 292 aa22.53■■□□□ 1.2
LAMA5-213ENST00000497053 ABCC5O15440 1437 aa22.53■■□□□ 1.2
LAMA5-213ENST00000497053 FER1L4A9Z1Z3 1794 aa22.52■■□□□ 1.2
LAMA5-213ENST00000497053 AFAP1Q8N556 730 aa22.51■■□□□ 1.19
LAMA5-213ENST00000497053 MYT1LQ9UL68 1186 aa22.5■■□□□ 1.19
LAMA5-213ENST00000497053 PLEKHH2Q8IVE3 1493 aa22.49■■□□□ 1.19
LAMA5-213ENST00000497053 MBD5Q9P267 1494 aa22.49■■□□□ 1.19
LAMA5-213ENST00000497053 ARHGEF12Q9NZN5 1544 aa22.49■■□□□ 1.19
LAMA5-213ENST00000497053 PLPPR3Q6T4P5 718 aa22.49■■□□□ 1.19
LAMA5-213ENST00000497053 ILDR1Q86SU0 546 aaPredicted RBP22.49■■□□□ 1.19
LAMA5-213ENST00000497053 GCC2Q8IWJ2 1684 aa22.49■■□□□ 1.19
LAMA5-213ENST00000497053 LMTK3Q96Q04 1460 aa22.48■■□□□ 1.19
LAMA5-213ENST00000497053 CCDC141Q6ZP82 1450 aa22.47■■□□□ 1.19
LAMA5-213ENST00000497053 DIP2CQ9Y2E4 1556 aa22.46■■□□□ 1.19
LAMA5-213ENST00000497053 SHANK2Q9UPX8 1470 aa22.46■■□□□ 1.19
LAMA5-213ENST00000497053 KIAA1107Q9UPP5 1409 aa22.45■■□□□ 1.18
LAMA5-213ENST00000497053 TRAPPC8Q9Y2L5 1435 aa22.45■■□□□ 1.18
LAMA5-213ENST00000497053 MLH3Q9UHC1 1453 aa22.45■■□□□ 1.18
LAMA5-213ENST00000497053 ABCA6Q8N139 1617 aa22.44■■□□□ 1.18
LAMA5-213ENST00000497053 REREQ9P2R6 1566 aa22.43■■□□□ 1.18
LAMA5-213ENST00000497053 HNRNPMP52272 730 aaKnown RBP eCLIP22.42■■□□□ 1.18
LAMA5-213ENST00000497053 MAST1Q9Y2H9 1570 aa22.42■■□□□ 1.18
LAMA5-213ENST00000497053 ADGRL2O95490 1459 aa22.41■■□□□ 1.18
LAMA5-213ENST00000497053 CHIC2Q9UKJ5 165 aa22.4■■□□□ 1.18
LAMA5-213ENST00000497053 HFM1A2PYH4 1435 aa22.4■■□□□ 1.18
LAMA5-213ENST00000497053 NAIPQ13075 1403 aa22.38■■□□□ 1.17
LAMA5-213ENST00000497053 SETD5Q9C0A6 1442 aa22.38■■□□□ 1.17
LAMA5-213ENST00000497053 ROCK1Q13464 1354 aa22.37■■□□□ 1.17
LAMA5-213ENST00000497053 KIDINS220Q9ULH0 1771 aa22.36■■□□□ 1.17
LAMA5-213ENST00000497053 RAB3GAP2Q9H2M9 1393 aa22.36■■□□□ 1.17
LAMA5-213ENST00000497053 HSPA2P54652 639 aa22.35■■□□□ 1.17
LAMA5-213ENST00000497053 AGLP35573 1532 aa22.35■■□□□ 1.17
LAMA5-213ENST00000497053 PLXNC1O60486 1568 aa22.34■■□□□ 1.17
LAMA5-213ENST00000497053 INO80Q9ULG1 1556 aaPredicted RBP22.34■■□□□ 1.17
LAMA5-213ENST00000497053 RRP7BPQ9NSQ0 103 aa22.33■■□□□ 1.17
LAMA5-213ENST00000497053 PREX1Q8TCU6 1659 aa22.32■■□□□ 1.16
LAMA5-213ENST00000497053 CEBPAP49715 358 aaPredicted RBP22.31■■□□□ 1.16
LAMA5-213ENST00000497053 NCOA1Q15788 1441 aa22.31■■□□□ 1.16
LAMA5-213ENST00000497053 ANKRD30AQ9BXX3 1397 aa22.29■■□□□ 1.16
LAMA5-213ENST00000497053 SPAG9O60271 1321 aaKnown RBP22.29■■□□□ 1.16
LAMA5-213ENST00000497053 ATP7AQ04656 1500 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms