RNA–Protein interactions for RNA: ENST00000497053.2

LAMA5-213, Transcript of laminin subunit alpha 5, humanhuman

TSL 3

Gene LAMA5, Length 723 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-213ENST00000497053 NISCHQ9Y2I1 1504 aa34.8■■■■□ 3.16
LAMA5-213ENST00000497053 CCDC180Q9P1Z9 1646 aa31.1■■■□□ 2.57
LAMA5-213ENST00000497053 ABCC9O60706 1549 aa30.95■■■□□ 2.55
LAMA5-213ENST00000497053 RB1CC1Q8TDY2 1594 aa29.54■■■□□ 2.32
LAMA5-213ENST00000497053 NACADO15069 1562 aa29.35■■■□□ 2.29
LAMA5-213ENST00000497053 DCAF8L2P0C7V8 631 aa29.2■■■□□ 2.26
LAMA5-213ENST00000497053 ZCCHC6Q5VYS8 1495 aaKnown RBP29.2■■■□□ 2.26
LAMA5-213ENST00000497053 MYO15BQ96JP2 1530 aa28.98■■■□□ 2.23
LAMA5-213ENST00000497053 DNAJC5BQ9UF47 199 aa28.85■■■□□ 2.21
LAMA5-213ENST00000497053 UNC13AQ9UPW8 1703 aa28.83■■■□□ 2.21
LAMA5-213ENST00000497053 PABPN1Q86U42 306 aaKnown RBP eCLIP28.8■■■□□ 2.2
LAMA5-213ENST00000497053 DCAF1Q9Y4B6 1507 aa28.77■■■□□ 2.2
LAMA5-213ENST00000497053 BICRAQ9NZM4 1560 aa28.63■■■□□ 2.17
LAMA5-213ENST00000497053 SCRIBQ14160 1630 aa28.35■■■□□ 2.13
LAMA5-213ENST00000497053 SHROOM4Q9ULL8 1493 aa28.31■■■□□ 2.12
LAMA5-213ENST00000497053 CC2D2AQ9P2K1 1620 aa27.97■■■□□ 2.07
LAMA5-213ENST00000497053 EIF4G1Q04637 1599 aaKnown RBP27.94■■■□□ 2.06
LAMA5-213ENST00000497053 CECR2Q9BXF3 1484 aa27.87■■■□□ 2.05
LAMA5-213ENST00000497053 NCAPD3P42695 1498 aa27.06■■□□□ 1.92
LAMA5-213ENST00000497053 SMARCA4P51532 1647 aa27.04■■□□□ 1.92
LAMA5-213ENST00000497053 ATAD2BQ9ULI0 1458 aa27.01■■□□□ 1.91
LAMA5-213ENST00000497053 SMARCA2P51531 1590 aa26.97■■□□□ 1.91
LAMA5-213ENST00000497053 BAZ1AQ9NRL2 1556 aaPredicted RBP26.93■■□□□ 1.9
LAMA5-213ENST00000497053 HMGXB3Q12766 1538 aa26.91■■□□□ 1.9
LAMA5-213ENST00000497053 MROH2BQ7Z745 1585 aa26.89■■□□□ 1.9
LAMA5-213ENST00000497053 RSF1Q96T23 1441 aaPredicted RBP26.82■■□□□ 1.88
LAMA5-213ENST00000497053 BAZ1BQ9UIG0 1483 aaKnown RBP26.79■■□□□ 1.88
LAMA5-213ENST00000497053 PEG3Q9GZU2 1588 aa26.76■■□□□ 1.87
LAMA5-213ENST00000497053 SUPT5HO00267 1087 aaKnown RBP26.75■■□□□ 1.87
LAMA5-213ENST00000497053 ERCC6Q03468 1493 aa26.74■■□□□ 1.87
LAMA5-213ENST00000497053 WIZO95785 1651 aa26.7■■□□□ 1.86
LAMA5-213ENST00000497053 CUX2O14529 1486 aa26.64■■□□□ 1.86
LAMA5-213ENST00000497053 NESP48681 1621 aa26.61■■□□□ 1.85
LAMA5-213ENST00000497053 LAMC3Q9Y6N6 1575 aa26.47■■□□□ 1.83
LAMA5-213ENST00000497053 DNAJC5Q9H3Z4 198 aa26.43■■□□□ 1.82
LAMA5-213ENST00000497053 TOP2AP11388 1531 aaKnown RBP26.4■■□□□ 1.82
LAMA5-213ENST00000497053 THOC2Q8NI27 1593 aaKnown RBP26.35■■□□□ 1.81
LAMA5-213ENST00000497053 PDS5BQ9NTI5 1447 aa26.31■■□□□ 1.8
LAMA5-213ENST00000497053 KIF21AQ7Z4S6 1674 aa26.3■■□□□ 1.8
LAMA5-213ENST00000497053 CADPSQ9ULU8 1353 aa26.25■■□□□ 1.79
LAMA5-213ENST00000497053 MRC2Q9UBG0 1479 aa26.09■■□□□ 1.77
LAMA5-213ENST00000497053 CCDC88BA6NC98 1476 aa26.04■■□□□ 1.76
LAMA5-213ENST00000497053 WDR62O43379 1518 aa26.01■■□□□ 1.75
LAMA5-213ENST00000497053 CEP164Q9UPV0 1460 aa26.01■■□□□ 1.75
LAMA5-213ENST00000497053 CFTRP13569 1480 aa25.98■■□□□ 1.75
LAMA5-213ENST00000497053 FANCD2Q9BXW9 1451 aa25.98■■□□□ 1.75
LAMA5-213ENST00000497053 PRDM2Q13029 1718 aa25.77■■□□□ 1.72
LAMA5-213ENST00000497053 URB2Q14146 1524 aaKnown RBP25.75■■□□□ 1.71
LAMA5-213ENST00000497053 TOPBP1Q92547 1522 aa25.5■■□□□ 1.67
LAMA5-213ENST00000497053 IFT140Q96RY7 1462 aa25.47■■□□□ 1.67
LAMA5-213ENST00000497053 ABCC8Q09428 1581 aa25.46■■□□□ 1.67
LAMA5-213ENST00000497053 DNMBPQ6XZF7 1577 aa25.44■■□□□ 1.66
LAMA5-213ENST00000497053 CHIC1Q5VXU3 224 aa25.43■■□□□ 1.66
LAMA5-213ENST00000497053 OSCARQ8IYS5 282 aa25.41■■□□□ 1.66
LAMA5-213ENST00000497053 ZNF608Q9ULD9 1512 aaPredicted RBP25.41■■□□□ 1.66
LAMA5-213ENST00000497053 TRIM41Q8WV44 630 aa25.36■■□□□ 1.65
LAMA5-213ENST00000497053 EIF4G3O43432 1585 aaKnown RBP25.31■■□□□ 1.64
LAMA5-213ENST00000497053 SYNJ1O43426 1573 aa25.27■■□□□ 1.64
LAMA5-213ENST00000497053 TARBP1Q13395 1621 aaKnown RBP25.26■■□□□ 1.63
LAMA5-213ENST00000497053 WRNQ14191 1432 aaPredicted RBP eCLIP25.25■■□□□ 1.63
LAMA5-213ENST00000497053 POLA1P09884 1462 aaPredicted RBP25.24■■□□□ 1.63
LAMA5-213ENST00000497053 BIVM-ERCC5R4GMW8 1640 aa25.19■■□□□ 1.62
LAMA5-213ENST00000497053 CUX1P39880 1505 aa25.19■■□□□ 1.62
LAMA5-213ENST00000497053 AQRO60306 1485 aaKnown RBP eCLIP25.18■■□□□ 1.622e-12■■■■□ 25.9
LAMA5-213ENST00000497053 TOP2BQ02880 1626 aa25.16■■□□□ 1.62
LAMA5-213ENST00000497053 RAD54L2Q9Y4B4 1467 aa25.14■■□□□ 1.61
LAMA5-213ENST00000497053 SOGA1O94964 1423 aa25.12■■□□□ 1.61
LAMA5-213ENST00000497053 FGD5Q6ZNL6 1462 aa25.12■■□□□ 1.61
LAMA5-213ENST00000497053 RIMBP3CA6NJZ7 1639 aa25.1■■□□□ 1.61
LAMA5-213ENST00000497053 RIMBP3BA6NNM3 1639 aa25.1■■□□□ 1.61
LAMA5-213ENST00000497053 RIMBP3Q9UFD9 1639 aa25.1■■□□□ 1.61
LAMA5-213ENST00000497053 CHD1O14646 1710 aa25.09■■□□□ 1.61
LAMA5-213ENST00000497053 TDRD9Q8NDG6 1382 aaKnown RBP25.05■■□□□ 1.6
LAMA5-213ENST00000497053 WDR97A6NE52 1622 aa25.04■■□□□ 1.6
LAMA5-213ENST00000497053 ARHGEF11O15085 1522 aa25.03■■□□□ 1.6
LAMA5-213ENST00000497053 FBLN2P98095 1184 aa25.01■■□□□ 1.59
LAMA5-213ENST00000497053 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
LAMA5-213ENST00000497053 GRIN2BQ13224 1484 aa24.91■■□□□ 1.58
LAMA5-213ENST00000497053 MAGI1Q96QZ7 1491 aaPredicted RBP24.9■■□□□ 1.58
LAMA5-213ENST00000497053 CHMP7Q8WUX9 453 aaPredicted RBP24.84■■□□□ 1.57
LAMA5-213ENST00000497053 PBRM1Q86U86 1689 aa24.84■■□□□ 1.57
LAMA5-213ENST00000497053 GAPVD1Q14C86 1478 aa24.83■■□□□ 1.57
LAMA5-213ENST00000497053 ABCA10Q8WWZ4 1543 aa24.83■■□□□ 1.57
LAMA5-213ENST00000497053 SYNJ2O15056 1496 aa24.82■■□□□ 1.56
LAMA5-213ENST00000497053 ABCA5Q8WWZ7 1642 aa24.8■■□□□ 1.56
LAMA5-213ENST00000497053 CYB5RLQ6IPT4 315 aa24.8■■□□□ 1.56
LAMA5-213ENST00000497053 CLASP1Q7Z460 1538 aa24.8■■□□□ 1.56
LAMA5-213ENST00000497053 ARAP1Q96P48 1450 aa24.78■■□□□ 1.56
LAMA5-213ENST00000497053 RUSC2Q8N2Y8 1516 aa24.78■■□□□ 1.56
LAMA5-213ENST00000497053 FAM9AQ8IZU1 332 aaPredicted RBP24.72■■□□□ 1.55
LAMA5-213ENST00000497053 EEA1Q15075 1411 aa24.68■■□□□ 1.54
LAMA5-213ENST00000497053 KIF27Q86VH2 1401 aa24.62■■□□□ 1.53
LAMA5-213ENST00000497053 ADAMTS12P58397 1594 aa24.61■■□□□ 1.53
LAMA5-213ENST00000497053 GRIN2AQ12879 1464 aa24.59■■□□□ 1.53
LAMA5-213ENST00000497053 ERICH3Q5RHP9 1530 aa24.53■■□□□ 1.52
LAMA5-213ENST00000497053 FHAD1B1AJZ9 1412 aa24.52■■□□□ 1.52
LAMA5-213ENST00000497053 TRHP20396 242 aaPredicted RBP24.51■■□□□ 1.51
LAMA5-213ENST00000497053 CSRNP3Q8WYN3 585 aa24.5■■□□□ 1.51
LAMA5-213ENST00000497053 CEP170Q5SW79 1584 aa24.5■■□□□ 1.51
LAMA5-213ENST00000497053 KIF21BO75037 1637 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms