RNA–Protein interactions for RNA: ENST00000495794.5

BRD9-213, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 4,865 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-213ENST00000495794 PNNQ9H307 717 aaKnown RBP17.99■□□□□ 0.47
BRD9-213ENST00000495794 CHMP4BQ9H444 224 aaKnown RBP17.99■□□□□ 0.47
BRD9-213ENST00000495794 NCLP19338 710 aaKnown RBP17.98■□□□□ 0.47
BRD9-213ENST00000495794 SAFB2Q14151 953 aaKnown RBP eCLIP17.98■□□□□ 0.47
BRD9-213ENST00000495794 CASC1Q6TDU7 716 aa17.97■□□□□ 0.47
BRD9-213ENST00000495794 ROCK2O75116 1388 aaKnown RBP17.97■□□□□ 0.47
BRD9-213ENST00000495794 ERICH6BQ5W0A0 696 aa17.96■□□□□ 0.47
BRD9-213ENST00000495794 RALBP1Q15311 655 aa17.96■□□□□ 0.47
BRD9-213ENST00000495794 DHX57Q6P158 1386 aaKnown RBP17.96■□□□□ 0.47
BRD9-213ENST00000495794 TRIM44Q96DX7 344 aaPredicted RBP17.95■□□□□ 0.46
BRD9-213ENST00000495794 RBM19Q9Y4C8 960 aaKnown RBP17.95■□□□□ 0.46
BRD9-213ENST00000495794 LMOD2Q6P5Q4 547 aa17.94■□□□□ 0.46
BRD9-213ENST00000495794 MLECQ14165 292 aa17.93■□□□□ 0.46
BRD9-213ENST00000495794 HNRNPMP52272 730 aaKnown RBP eCLIP17.92■□□□□ 0.465e-7■■■■□ 21.2
BRD9-213ENST00000495794 HAP1P54257 671 aaPredicted RBP17.92■□□□□ 0.46
BRD9-213ENST00000495794 HDGFP51858 240 aaKnown RBP17.91■□□□□ 0.46
BRD9-213ENST00000495794 RCAN3Q9UKA8 241 aa17.91■□□□□ 0.46
BRD9-213ENST00000495794 RSPH4AQ5TD94 716 aa17.9■□□□□ 0.46
BRD9-213ENST00000495794 JPH4Q96JJ6 628 aa17.9■□□□□ 0.46
BRD9-213ENST00000495794 STK26Q9P289 416 aa17.9■□□□□ 0.46
BRD9-213ENST00000495794 CCDC18Q5T9S5 1454 aa17.9■□□□□ 0.46
BRD9-213ENST00000495794 KIF3BO15066 747 aa17.88■□□□□ 0.45
BRD9-213ENST00000495794 FANCD2Q9BXW9 1451 aa17.86■□□□□ 0.45
BRD9-213ENST00000495794 SOX12O15370 315 aa17.86■□□□□ 0.45
BRD9-213ENST00000495794 NLRP13Q86W25 1043 aa17.85■□□□□ 0.45
BRD9-213ENST00000495794 U2AF1L5P0DN76 240 aaPredicted RBP17.85■□□□□ 0.45
BRD9-213ENST00000495794 U2AF1Q01081 240 aaKnown RBP eCLIP17.85■□□□□ 0.45
BRD9-213ENST00000495794 HDGFL2Q7Z4V5 671 aaPredicted RBP17.84■□□□□ 0.45
BRD9-213ENST00000495794 NCAPD3P42695 1498 aa17.83■□□□□ 0.44
BRD9-213ENST00000495794 HSP90AB1P08238 724 aaKnown RBP17.82■□□□□ 0.44
BRD9-213ENST00000495794 SPAG9O60271 1321 aaKnown RBP17.82■□□□□ 0.44
BRD9-213ENST00000495794 OS9Q13438 667 aaPredicted RBP17.8■□□□□ 0.44
BRD9-213ENST00000495794 IPO8O15397 1037 aaKnown RBP17.79■□□□□ 0.44
BRD9-213ENST00000495794 ST20-MTHFSA0A0A6YYL1 179 aa17.79■□□□□ 0.44
BRD9-213ENST00000495794 IGF1RP08069 1367 aa17.79■□□□□ 0.44
BRD9-213ENST00000495794 FGD5Q6ZNL6 1462 aa17.78■□□□□ 0.44
BRD9-213ENST00000495794 PTMAP06454 111 aaKnown RBP17.78■□□□□ 0.44
BRD9-213ENST00000495794 SYNJ1O43426 1573 aa17.78■□□□□ 0.44
BRD9-213ENST00000495794 TCERG1O14776 1098 aaKnown RBP17.77■□□□□ 0.44
BRD9-213ENST00000495794 EIF3AQ14152 1382 aaKnown RBP17.77■□□□□ 0.44
BRD9-213ENST00000495794 TPRNQ4KMQ1 711 aa17.77■□□□□ 0.44
BRD9-213ENST00000495794 TSHZ2Q9NRE2 1034 aa17.77■□□□□ 0.43
BRD9-213ENST00000495794 GOLGA2Q08379 1002 aa17.76■□□□□ 0.43
BRD9-213ENST00000495794 PDE3BQ13370 1112 aa17.76■□□□□ 0.43
BRD9-213ENST00000495794 HSCBQ8IWL3 235 aa17.76■□□□□ 0.43
BRD9-213ENST00000495794 KIF21BO75037 1637 aa17.76■□□□□ 0.43
BRD9-213ENST00000495794 ZRSR1Q15695 479 aaKnown RBP17.75■□□□□ 0.43
BRD9-213ENST00000495794 RTF1Q92541 710 aaKnown RBP17.75■□□□□ 0.43
BRD9-213ENST00000495794 PRKRIP1Q9H875 184 aaPredicted RBP17.74■□□□□ 0.43
BRD9-213ENST00000495794 KCNJ4P48050 445 aa17.73■□□□□ 0.43
BRD9-213ENST00000495794 CALD1Q05682 793 aaKnown RBP17.72■□□□□ 0.43
BRD9-213ENST00000495794 RWDD1Q9H446 243 aaPredicted RBP17.72■□□□□ 0.43
BRD9-213ENST00000495794 WASHC2CQ9Y4E1 1318 aa17.71■□□□□ 0.43
BRD9-213ENST00000495794 CCDC144AA2RUR9 1427 aa17.71■□□□□ 0.43
BRD9-213ENST00000495794 TERF2IPQ9NYB0 399 aa17.71■□□□□ 0.43
BRD9-213ENST00000495794 KIF15Q9NS87 1388 aa17.7■□□□□ 0.42
BRD9-213ENST00000495794 FGD1P98174 961 aa17.7■□□□□ 0.42
BRD9-213ENST00000495794 TRHP20396 242 aaPredicted RBP17.69■□□□□ 0.42
BRD9-213ENST00000495794 ITPRIPQ8IWB1 547 aa17.69■□□□□ 0.42
BRD9-213ENST00000495794 MYBBP1AQ9BQG0 1328 aaKnown RBP17.69■□□□□ 0.42
BRD9-213ENST00000495794 CCDC146Q8IYE0 955 aa17.69■□□□□ 0.42
BRD9-213ENST00000495794 PHLDB1Q86UU1 1377 aa17.69■□□□□ 0.42
BRD9-213ENST00000495794 RTN4Q9NQC3 1192 aaKnown RBP17.68■□□□□ 0.42
BRD9-213ENST00000495794 CFAP44Q96MT7 982 aa17.68■□□□□ 0.42
BRD9-213ENST00000495794 PANK3Q9H999 370 aa17.68■□□□□ 0.42
BRD9-213ENST00000495794 SPRYD3Q8NCJ5 442 aa17.67■□□□□ 0.42
BRD9-213ENST00000495794 RAD54L2Q9Y4B4 1467 aa17.67■□□□□ 0.42
BRD9-213ENST00000495794 APBB1O00213 710 aa17.67■□□□□ 0.42
BRD9-213ENST00000495794 TRAK1Q9UPV9 953 aa17.67■□□□□ 0.42
BRD9-213ENST00000495794 PTPRGP23470 1445 aa17.67■□□□□ 0.42
BRD9-213ENST00000495794 DNTTIP2Q5QJE6 756 aaKnown RBP17.67■□□□□ 0.42
BRD9-213ENST00000495794 DEKP35659 375 aaKnown RBP17.66■□□□□ 0.42
BRD9-213ENST00000495794 NUTM2DQ5VT03 806 aaPredicted RBP17.66■□□□□ 0.42
BRD9-213ENST00000495794 PLCB2Q00722 1185 aa17.65■□□□□ 0.42
BRD9-213ENST00000495794 CLUAP1Q96AJ1 413 aa17.65■□□□□ 0.42
BRD9-213ENST00000495794 SMC4Q9NTJ3 1288 aa17.65■□□□□ 0.42
BRD9-213ENST00000495794 ERICH3Q5RHP9 1530 aa17.65■□□□□ 0.42
BRD9-213ENST00000495794 USP47Q96K76 1375 aa17.65■□□□□ 0.42
BRD9-213ENST00000495794 CFTRP13569 1480 aa17.65■□□□□ 0.42
BRD9-213ENST00000495794 PMFBP1Q8TBY8 1022 aa17.65■□□□□ 0.42
BRD9-213ENST00000495794 MCCP23508 829 aa17.64■□□□□ 0.41
BRD9-213ENST00000495794 GAPVD1Q14C86 1478 aa17.64■□□□□ 0.41
BRD9-213ENST00000495794 CENPJQ9HC77 1338 aaPredicted RBP17.63■□□□□ 0.41
BRD9-213ENST00000495794 PAK3O75914 559 aaPredicted RBP17.63■□□□□ 0.41
BRD9-213ENST00000495794 FGD6Q6ZV73 1430 aa17.62■□□□□ 0.41
BRD9-213ENST00000495794 CDK11BP21127 795 aaKnown RBP17.62■□□□□ 0.41
BRD9-213ENST00000495794 TOP2BQ02880 1626 aa17.61■□□□□ 0.41
BRD9-213ENST00000495794 ZBED9Q6R2W3 1325 aa17.61■□□□□ 0.41
BRD9-213ENST00000495794 SLKQ9H2G2 1235 aaPredicted RBP17.6■□□□□ 0.41
BRD9-213ENST00000495794 MYOM3Q5VTT5 1437 aa17.6■□□□□ 0.41
BRD9-213ENST00000495794 IPO9Q96P70 1041 aaKnown RBP17.6■□□□□ 0.41
BRD9-213ENST00000495794 NAP1L2Q9ULW6 460 aaPredicted RBP17.59■□□□□ 0.41
BRD9-213ENST00000495794 ARAP1Q96P48 1450 aa17.59■□□□□ 0.41
BRD9-213ENST00000495794 TAOK2Q9UL54 1235 aa17.59■□□□□ 0.41
BRD9-213ENST00000495794 GOLGA6L4A6NEF3 574 aa17.59■□□□□ 0.41
BRD9-213ENST00000495794 NAP1L5Q96NT1 182 aaPredicted RBP17.59■□□□□ 0.41
BRD9-213ENST00000495794 ZNF644Q9H582 1327 aaPredicted RBP17.58■□□□□ 0.41
BRD9-213ENST00000495794 L1TD1Q5T7N2 865 aaKnown RBP17.58■□□□□ 0.4
BRD9-213ENST00000495794 HMGXB3Q12766 1538 aa17.58■□□□□ 0.4
BRD9-213ENST00000495794 STK31Q9BXU1 1019 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms