RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 ARHGAP5Q13017 1502 aa33.39■■■□□ 2.94
PSPC1-204ENST00000492741 PREX2Q70Z35 1606 aa33.39■■■□□ 2.94
PSPC1-204ENST00000492741 ZNF644Q9H582 1327 aaPredicted RBP33.39■■■□□ 2.94
PSPC1-204ENST00000492741 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.38■■■□□ 2.93
PSPC1-204ENST00000492741 CD109Q6YHK3 1445 aa33.36■■■□□ 2.93
PSPC1-204ENST00000492741 CDC42BPBQ9Y5S2 1711 aa33.36■■■□□ 2.93
PSPC1-204ENST00000492741 TCOF1Q13428 1488 aaKnown RBP33.36■■■□□ 2.93
PSPC1-204ENST00000492741 EFCAB2Q5VUJ9 269 aa33.36■■■□□ 2.93
PSPC1-204ENST00000492741 CAMSAP2Q08AD1 1489 aa33.32■■■□□ 2.92
PSPC1-204ENST00000492741 DIP2BQ9P265 1576 aa33.31■■■□□ 2.92
PSPC1-204ENST00000492741 GLI2P10070 1586 aa33.3■■■□□ 2.92
PSPC1-204ENST00000492741 ARAP3Q8WWN8 1544 aa33.27■■■□□ 2.92
PSPC1-204ENST00000492741 FANCAO15360 1455 aa33.24■■■□□ 2.91
PSPC1-204ENST00000492741 HNRNPMP52272 730 aaKnown RBP eCLIP33.22■■■□□ 2.91
PSPC1-204ENST00000492741 SAMD9LQ8IVG5 1584 aa33.22■■■□□ 2.91
PSPC1-204ENST00000492741 MAP3K4Q9Y6R4 1608 aa33.21■■■□□ 2.91
PSPC1-204ENST00000492741 PLEKHH2Q8IVE3 1493 aa33.19■■■□□ 2.9
PSPC1-204ENST00000492741 TRHP20396 242 aaPredicted RBP33.16■■■□□ 2.9
PSPC1-204ENST00000492741 DAPK1P53355 1430 aa33.15■■■□□ 2.9
PSPC1-204ENST00000492741 KIAA1107Q9UPP5 1409 aa33.14■■■□□ 2.9
PSPC1-204ENST00000492741 KIF13AQ9H1H9 1805 aa33.14■■■□□ 2.9
PSPC1-204ENST00000492741 RSPH4AQ5TD94 716 aa33.14■■■□□ 2.89
PSPC1-204ENST00000492741 CHIC2Q9UKJ5 165 aa33.14■■■□□ 2.89
PSPC1-204ENST00000492741 SYCP2Q9BX26 1530 aa33.13■■■□□ 2.89
PSPC1-204ENST00000492741 ABCC5O15440 1437 aa33.13■■■□□ 2.89
PSPC1-204ENST00000492741 AKNAQ7Z591 1439 aa33.13■■■□□ 2.89
PSPC1-204ENST00000492741 DNMT1P26358 1616 aaKnown RBP33.12■■■□□ 2.89
PSPC1-204ENST00000492741 CFAP74Q9C0B2 1584 aa33.11■■■□□ 2.89
PSPC1-204ENST00000492741 TSPY4P0CV99 314 aa33.11■■■□□ 2.89
PSPC1-204ENST00000492741 TSPY10P0CW01 314 aa33.11■■■□□ 2.89
PSPC1-204ENST00000492741 PTPRKQ15262 1439 aa33.1■■■□□ 2.89
PSPC1-204ENST00000492741 MBD5Q9P267 1494 aa33.1■■■□□ 2.89
PSPC1-204ENST00000492741 TSPOAP1O95153 1857 aa33.09■■■□□ 2.89
PSPC1-204ENST00000492741 ADGRL1O94910 1474 aa33.09■■■□□ 2.89
PSPC1-204ENST00000492741 ABCC1P33527 1531 aa33.09■■■□□ 2.89
PSPC1-204ENST00000492741 NEO1Q92859 1461 aa33.07■■■□□ 2.88
PSPC1-204ENST00000492741 SCAPERQ9BY12 1400 aa33.07■■■□□ 2.88
PSPC1-204ENST00000492741 ARHGEF5Q12774 1597 aa33.06■■■□□ 2.88
PSPC1-204ENST00000492741 ARHGEF12Q9NZN5 1544 aa33.05■■■□□ 2.88
PSPC1-204ENST00000492741 CCDC141Q6ZP82 1450 aa33.05■■■□□ 2.88
PSPC1-204ENST00000492741 TEX14Q8IWB6 1497 aa33.04■■■□□ 2.88
PSPC1-204ENST00000492741 TRAPPC8Q9Y2L5 1435 aa33■■■□□ 2.87
PSPC1-204ENST00000492741 RRP7BPQ9NSQ0 103 aa32.99■■■□□ 2.87
PSPC1-204ENST00000492741 AFAP1Q8N556 730 aa32.99■■■□□ 2.87
PSPC1-204ENST00000492741 C9orf84Q5VXU9 1444 aa32.97■■■□□ 2.87
PSPC1-204ENST00000492741 CROCC2H7BZ55 1655 aa32.97■■■□□ 2.87
PSPC1-204ENST00000492741 PPRC1Q5VV67 1664 aaKnown RBP32.97■■■□□ 2.87
PSPC1-204ENST00000492741 SHANK2Q9UPX8 1470 aa32.95■■■□□ 2.87
PSPC1-204ENST00000492741 MYT1LQ9UL68 1186 aa32.94■■■□□ 2.86
PSPC1-204ENST00000492741 ROCK1Q13464 1354 aa32.93■■■□□ 2.86
PSPC1-204ENST00000492741 ANKRD30AQ9BXX3 1397 aa32.93■■■□□ 2.86
PSPC1-204ENST00000492741 SPAG9O60271 1321 aaKnown RBP32.92■■■□□ 2.86
PSPC1-204ENST00000492741 DENND4BO75064 1496 aaPredicted RBP32.91■■■□□ 2.86
PSPC1-204ENST00000492741 SETD5Q9C0A6 1442 aa32.91■■■□□ 2.86
PSPC1-204ENST00000492741 ZNF518AQ6AHZ1 1483 aa32.9■■■□□ 2.86
PSPC1-204ENST00000492741 HFM1A2PYH4 1435 aa32.89■■■□□ 2.86
PSPC1-204ENST00000492741 RAPGEF3O95398 923 aa32.88■■■□□ 2.85
PSPC1-204ENST00000492741 NCOA1Q15788 1441 aa32.88■■■□□ 2.85
PSPC1-204ENST00000492741 POGZQ7Z3K3 1410 aa32.87■■■□□ 2.85
PSPC1-204ENST00000492741 ADGRL2O95490 1459 aa32.87■■■□□ 2.85
PSPC1-204ENST00000492741 ADGBQ8N7X0 1667 aa32.86■■■□□ 2.85
PSPC1-204ENST00000492741 NAIPQ13075 1403 aa32.85■■■□□ 2.85
PSPC1-204ENST00000492741 MAST1Q9Y2H9 1570 aa32.84■■■□□ 2.85
PSPC1-204ENST00000492741 RAB3GAP2Q9H2M9 1393 aa32.83■■■□□ 2.85
PSPC1-204ENST00000492741 RTEL1-TNFRSF6BF6WH68 1400 aa32.8■■■□□ 2.84
PSPC1-204ENST00000492741 KIF15Q9NS87 1388 aa32.8■■■□□ 2.84
PSPC1-204ENST00000492741 ATP7AQ04656 1500 aa32.75■■■□□ 2.83
PSPC1-204ENST00000492741 GCC2Q8IWJ2 1684 aa32.75■■■□□ 2.83
PSPC1-204ENST00000492741 KDM5CP41229 1560 aa32.74■■■□□ 2.83
PSPC1-204ENST00000492741 ZFYVE16Q7Z3T8 1539 aa32.74■■■□□ 2.83
PSPC1-204ENST00000492741 RICTORQ6R327 1708 aa32.73■■■□□ 2.83
PSPC1-204ENST00000492741 HRCP23327 699 aa32.72■■■□□ 2.83
PSPC1-204ENST00000492741 PLXNC1O60486 1568 aa32.71■■■□□ 2.83
PSPC1-204ENST00000492741 INO80Q9ULG1 1556 aaPredicted RBP32.71■■■□□ 2.83
PSPC1-204ENST00000492741 ANKRD50Q9ULJ7 1429 aa32.7■■■□□ 2.83
PSPC1-204ENST00000492741 MLH3Q9UHC1 1453 aa32.7■■■□□ 2.83
PSPC1-204ENST00000492741 HECW2Q9P2P5 1572 aa32.69■■■□□ 2.82
PSPC1-204ENST00000492741 COL17A1Q9UMD9 1497 aaPredicted RBP32.67■■■□□ 2.82
PSPC1-204ENST00000492741 FRMPD1Q5SYB0 1578 aa32.66■■■□□ 2.82
PSPC1-204ENST00000492741 KIDINS220Q9ULH0 1771 aa32.66■■■□□ 2.82
PSPC1-204ENST00000492741 DUOX2Q9NRD8 1548 aa32.65■■■□□ 2.82
PSPC1-204ENST00000492741 TRIM52Q96A61 297 aa32.64■■■□□ 2.82
PSPC1-204ENST00000492741 KDM6BO15054 1643 aa32.64■■■□□ 2.82
PSPC1-204ENST00000492741 CCER1Q8TC90 406 aaPredicted RBP32.6■■■□□ 2.81
PSPC1-204ENST00000492741 ZMYM4Q5VZL5 1548 aa32.6■■■□□ 2.81
PSPC1-204ENST00000492741 ACIN1Q9UKV3 1341 aaKnown RBP32.6■■■□□ 2.81
PSPC1-204ENST00000492741 MAGI2Q86UL8 1455 aa32.57■■■□□ 2.8
PSPC1-204ENST00000492741 ERBINQ96RT1 1412 aa32.56■■■□□ 2.8
PSPC1-204ENST00000492741 DHX29Q7Z478 1369 aaKnown RBP32.56■■■□□ 2.8
PSPC1-204ENST00000492741 YEATS2Q9ULM3 1422 aa32.55■■■□□ 2.8
PSPC1-204ENST00000492741 A2MP01023 1474 aa32.53■■■□□ 2.8
PSPC1-204ENST00000492741 ABCA6Q8N139 1617 aa32.53■■■□□ 2.8
PSPC1-204ENST00000492741 DIP2CQ9Y2E4 1556 aa32.5■■■□□ 2.79
PSPC1-204ENST00000492741 KIF3BO15066 747 aa32.49■■■□□ 2.79
PSPC1-204ENST00000492741 DHX57Q6P158 1386 aaKnown RBP32.48■■■□□ 2.79
PSPC1-204ENST00000492741 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.48■■■□□ 2.794e-7■■■■□ 22.7
PSPC1-204ENST00000492741 NUP155O75694 1391 aa32.45■■■□□ 2.79
PSPC1-204ENST00000492741 ATP10AO60312 1499 aa32.45■■■□□ 2.79
PSPC1-204ENST00000492741 MPHOSPH9Q99550 1183 aa32.4■■■□□ 2.78
PSPC1-204ENST00000492741 SLC4A1APQ9BWU0 796 aaKnown RBP32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms