RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 KDM5BQ9UGL1 1544 aa15.73■□□□□ 0.11
SRRM1-217ENST00000490543 MAP3K4Q9Y6R4 1608 aa15.71■□□□□ 0.11
SRRM1-217ENST00000490543 ZCCHC11Q5TAX3 1644 aaKnown RBP15.68■□□□□ 0.1
SRRM1-217ENST00000490543 HAX1O00165 279 aa15.68■□□□□ 0.1
SRRM1-217ENST00000490543 UGGT2Q9NYU1 1516 aa15.68■□□□□ 0.1
SRRM1-217ENST00000490543 HECW2Q9P2P5 1572 aa15.67■□□□□ 0.1
SRRM1-217ENST00000490543 TEX14Q8IWB6 1497 aa15.67■□□□□ 0.1
SRRM1-217ENST00000490543 FKBP8Q14318 412 aa15.65■□□□□ 0.1
SRRM1-217ENST00000490543 RAPGEF2Q9Y4G8 1499 aa15.65■□□□□ 0.1
SRRM1-217ENST00000490543 KIAA0556O60303 1618 aa15.64■□□□□ 0.09
SRRM1-217ENST00000490543 KCNH8Q96L42 1107 aa15.63■□□□□ 0.09
SRRM1-217ENST00000490543 WDR7Q9Y4E6 1490 aa15.63■□□□□ 0.09
SRRM1-217ENST00000490543 CD109Q6YHK3 1445 aa15.6■□□□□ 0.09
SRRM1-217ENST00000490543 CREBZFQ9NS37 354 aa15.57■□□□□ 0.08
SRRM1-217ENST00000490543 MAGI3Q5TCQ9 1506 aa15.57■□□□□ 0.08
SRRM1-217ENST00000490543 EVX2Q03828 476 aa15.55■□□□□ 0.08
SRRM1-217ENST00000490543 SP7Q8TDD2 431 aaPredicted RBP15.55■□□□□ 0.08
SRRM1-217ENST00000490543 FARP1Q9Y4F1 1045 aaPredicted RBP15.55■□□□□ 0.08
SRRM1-217ENST00000490543 ABCA8O94911 1581 aa15.53■□□□□ 0.08
SRRM1-217ENST00000490543 CFAP43Q8NDM7 1665 aa15.52■□□□□ 0.08
SRRM1-217ENST00000490543 C19orf67A6NJJ6 358 aa15.52■□□□□ 0.08
SRRM1-217ENST00000490543 ARID3CA6NKF2 412 aa15.52■□□□□ 0.08
SRRM1-217ENST00000490543 GOLGA3Q08378 1498 aa15.5■□□□□ 0.07
SRRM1-217ENST00000490543 KIF21BO75037 1637 aa15.5■□□□□ 0.07
SRRM1-217ENST00000490543 CTTNBP2Q8WZ74 1663 aa15.48■□□□□ 0.07
SRRM1-217ENST00000490543 P3H3Q8IVL6 736 aa15.47■□□□□ 0.07
SRRM1-217ENST00000490543 ARAP3Q8WWN8 1544 aa15.46■□□□□ 0.07
SRRM1-217ENST00000490543 FBXO41Q8TF61 875 aa15.45■□□□□ 0.06
SRRM1-217ENST00000490543 ATP10BO94823 1461 aa15.45■□□□□ 0.06
SRRM1-217ENST00000490543 RAPGEF3O95398 923 aa15.44■□□□□ 0.06
SRRM1-217ENST00000490543 PRXQ9BXM0 1461 aa15.43■□□□□ 0.06
SRRM1-217ENST00000490543 PTPRMP28827 1452 aa15.42■□□□□ 0.06
SRRM1-217ENST00000490543 ADAMTSL3P82987 1691 aa15.39■□□□□ 0.05
SRRM1-217ENST00000490543 PHLDB1Q86UU1 1377 aa15.37■□□□□ 0.05
SRRM1-217ENST00000490543 ABCA9Q8IUA7 1624 aa15.36■□□□□ 0.05
SRRM1-217ENST00000490543 CD44P16070 742 aaKnown RBP15.36■□□□□ 0.05
SRRM1-217ENST00000490543 MNX1P50219 401 aaPredicted RBP15.36■□□□□ 0.05
SRRM1-217ENST00000490543 FAM9AQ8IZU1 332 aaPredicted RBP15.36■□□□□ 0.05
SRRM1-217ENST00000490543 ARID4BQ4LE39 1312 aaPredicted RBP15.36■□□□□ 0.05
SRRM1-217ENST00000490543 NEO1Q92859 1461 aa15.33■□□□□ 0.04
SRRM1-217ENST00000490543 FRMPD1Q5SYB0 1578 aa15.32■□□□□ 0.04
SRRM1-217ENST00000490543 MADDQ8WXG6 1647 aa15.31■□□□□ 0.04
SRRM1-217ENST00000490543 BCORL1Q5H9F3 1711 aa15.31■□□□□ 0.04
SRRM1-217ENST00000490543 LMTK3Q96Q04 1460 aa15.3■□□□□ 0.04
SRRM1-217ENST00000490543 PCF11O94913 1555 aaKnown RBP15.29■□□□□ 0.04
SRRM1-217ENST00000490543 HSPA2P54652 639 aa15.29■□□□□ 0.04
SRRM1-217ENST00000490543 RAPGEF6Q8TEU7 1601 aa15.28■□□□□ 0.04
SRRM1-217ENST00000490543 RANGAP1P46060 587 aaPredicted RBP15.28■□□□□ 0.04
SRRM1-217ENST00000490543 MIER1Q8N108 512 aa15.28■□□□□ 0.04
SRRM1-217ENST00000490543 SAMD9Q5K651 1589 aa15.28■□□□□ 0.04
SRRM1-217ENST00000490543 NUP153P49790 1475 aaKnown RBP15.27■□□□□ 0.04
SRRM1-217ENST00000490543 DENND4BO75064 1496 aaPredicted RBP15.24■□□□□ 0.03
SRRM1-217ENST00000490543 RIMS1Q86UR5 1692 aaKnown RBP15.24■□□□□ 0.03
SRRM1-217ENST00000490543 PLEKHD1A6NEE1 506 aa15.23■□□□□ 0.03
SRRM1-217ENST00000490543 AKNAQ7Z591 1439 aa15.23■□□□□ 0.03
SRRM1-217ENST00000490543 PLEKHG5O94827 1062 aa15.22■□□□□ 0.03
SRRM1-217ENST00000490543 FHOD3Q2V2M9 1422 aa15.22■□□□□ 0.03
SRRM1-217ENST00000490543 ARHGEF40Q8TER5 1519 aa15.22■□□□□ 0.03
SRRM1-217ENST00000490543 RICTORQ6R327 1708 aa15.2■□□□□ 0.02
SRRM1-217ENST00000490543 YEATS2Q9ULM3 1422 aa15.2■□□□□ 0.02
SRRM1-217ENST00000490543 GABBR2O75899 941 aa15.2■□□□□ 0.02
SRRM1-217ENST00000490543 MLECQ14165 292 aa15.2■□□□□ 0.02
SRRM1-217ENST00000490543 PLCD3Q8N3E9 789 aa15.2■□□□□ 0.02
SRRM1-217ENST00000490543 ZRANB1Q9UGI0 708 aa15.2■□□□□ 0.02
SRRM1-217ENST00000490543 FANCAO15360 1455 aa15.2■□□□□ 0.02
SRRM1-217ENST00000490543 FBXO3Q9UK99 471 aa15.19■□□□□ 0.02
SRRM1-217ENST00000490543 SIGLEC1Q9BZZ2 1709 aa15.19■□□□□ 0.02
SRRM1-217ENST00000490543 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.18■□□□□ 0.02
SRRM1-217ENST00000490543 CERKQ8TCT0 537 aa15.17■□□□□ 0.02
SRRM1-217ENST00000490543 POGZQ7Z3K3 1410 aa15.16■□□□□ 0.02
SRRM1-217ENST00000490543 TTC37Q6PGP7 1564 aa15.15■□□□□ 0.02
SRRM1-217ENST00000490543 ZMYM4Q5VZL5 1548 aa15.14■□□□□ 0.01
SRRM1-217ENST00000490543 ZFYVE16Q7Z3T8 1539 aa15.14■□□□□ 0.01
SRRM1-217ENST00000490543 PAK3O75914 559 aaPredicted RBP15.14■□□□□ 0.01
SRRM1-217ENST00000490543 ZNF579Q8NAF0 562 aaKnown RBP15.14■□□□□ 0.01
SRRM1-217ENST00000490543 SCAPERQ9BY12 1400 aa15.12■□□□□ 0.01
SRRM1-217ENST00000490543 HECW1Q76N89 1606 aa15.12■□□□□ 0.01
SRRM1-217ENST00000490543 CEBPAP49715 358 aaPredicted RBP15.11■□□□□ 0.01
SRRM1-217ENST00000490543 MAGI2Q86UL8 1455 aa15.11■□□□□ 0.01
SRRM1-217ENST00000490543 EFCAB5A4FU69 1503 aa15.11■□□□□ 0.01
SRRM1-217ENST00000490543 CFAP74Q9C0B2 1584 aa15.11■□□□□ 0.01
SRRM1-217ENST00000490543 CDK13Q14004 1512 aaKnown RBP15.1■□□□□ 0.01
SRRM1-217ENST00000490543 PLCH2O75038 1416 aa15.09■□□□□ 0.01
SRRM1-217ENST00000490543 FER1L4A9Z1Z3 1794 aa15.08■□□□□ 0
SRRM1-217ENST00000490543 ATP10AO60312 1499 aa15.07■□□□□ 0
SRRM1-217ENST00000490543 ARHGEF12Q9NZN5 1544 aa15.06■□□□□ 0
SRRM1-217ENST00000490543 CLCN6P51797 869 aa15.05■□□□□ -0
SRRM1-217ENST00000490543 EFCAB2Q5VUJ9 269 aa15.05■□□□□ -0
SRRM1-217ENST00000490543 ILDR2Q71H61 639 aa15.05■□□□□ -0
SRRM1-217ENST00000490543 ZBTB47Q9UFB7 747 aaPredicted RBP15.05■□□□□ -0
SRRM1-217ENST00000490543 ATP1B4Q9UN42 357 aaPredicted RBP15.05■□□□□ -0
SRRM1-217ENST00000490543 EEA1Q15075 1411 aa15.04■□□□□ -0
SRRM1-217ENST00000490543 AFAP1Q8N556 730 aa15.04■□□□□ -0
SRRM1-217ENST00000490543 PHF12Q96QT6 1004 aa15.04■□□□□ -0
SRRM1-217ENST00000490543 C9orf84Q5VXU9 1444 aa15.03■□□□□ -0
SRRM1-217ENST00000490543 VASPP50552 380 aaPredicted RBP15.03■□□□□ -0
SRRM1-217ENST00000490543 TSPYL2Q9H2G4 693 aaPredicted RBP15.03■□□□□ -0
SRRM1-217ENST00000490543 RASEFQ8IZ41 740 aa15.01□□□□□ -0.01
SRRM1-217ENST00000490543 DISP3Q9P2K9 1392 aa15□□□□□ -0.01
SRRM1-217ENST00000490543 STRCQ7RTU9 1775 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms