RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 PREX2Q70Z35 1606 aa19.38■□□□□ 0.69
HDAC1-210ENST00000490081 CCNB3Q8WWL7 1395 aa19.38■□□□□ 0.69
HDAC1-210ENST00000490081 NEO1Q92859 1461 aa19.38■□□□□ 0.69
HDAC1-210ENST00000490081 CDC42BPBQ9Y5S2 1711 aa19.38■□□□□ 0.69
HDAC1-210ENST00000490081 ITSN2Q9NZM3 1697 aa19.36■□□□□ 0.69
HDAC1-210ENST00000490081 EFCAB2Q5VUJ9 269 aa19.36■□□□□ 0.69
HDAC1-210ENST00000490081 CFAP74Q9C0B2 1584 aa19.36■□□□□ 0.69
HDAC1-210ENST00000490081 FANCAO15360 1455 aa19.34■□□□□ 0.69
HDAC1-210ENST00000490081 MIA2Q96PC5 1412 aa19.34■□□□□ 0.69
HDAC1-210ENST00000490081 MYOM3Q5VTT5 1437 aa19.32■□□□□ 0.68
HDAC1-210ENST00000490081 CFDP1Q9UEE9 299 aaPredicted RBP19.31■□□□□ 0.68
HDAC1-210ENST00000490081 ARHGAP5Q13017 1502 aa19.3■□□□□ 0.68
HDAC1-210ENST00000490081 AKNAQ7Z591 1439 aa19.29■□□□□ 0.68
HDAC1-210ENST00000490081 KIAA1107Q9UPP5 1409 aa19.28■□□□□ 0.68
HDAC1-210ENST00000490081 PLEKHH2Q8IVE3 1493 aa19.28■□□□□ 0.68
HDAC1-210ENST00000490081 FGD6Q6ZV73 1430 aa19.24■□□□□ 0.67
HDAC1-210ENST00000490081 SAMD9LQ8IVG5 1584 aa19.23■□□□□ 0.67
HDAC1-210ENST00000490081 ADGRL1O94910 1474 aa19.23■□□□□ 0.67
HDAC1-210ENST00000490081 RSPH4AQ5TD94 716 aa19.23■□□□□ 0.67
HDAC1-210ENST00000490081 TCOF1Q13428 1488 aaKnown RBP19.22■□□□□ 0.67
HDAC1-210ENST00000490081 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.21■□□□□ 0.67
HDAC1-210ENST00000490081 ABCC1P33527 1531 aa19.21■□□□□ 0.67
HDAC1-210ENST00000490081 SCAPERQ9BY12 1400 aa19.21■□□□□ 0.67
HDAC1-210ENST00000490081 PPARGC1BQ86YN6 1023 aaKnown RBP19.2■□□□□ 0.66
HDAC1-210ENST00000490081 DENND4BO75064 1496 aaPredicted RBP19.2■□□□□ 0.66
HDAC1-210ENST00000490081 PTPN23Q9H3S7 1636 aa19.18■□□□□ 0.66
HDAC1-210ENST00000490081 CAMSAP2Q08AD1 1489 aa19.18■□□□□ 0.66
HDAC1-210ENST00000490081 MBD5Q9P267 1494 aa19.18■□□□□ 0.66
HDAC1-210ENST00000490081 ZNF777Q9ULD5 760 aaPredicted RBP19.18■□□□□ 0.66
HDAC1-210ENST00000490081 ARHGEF12Q9NZN5 1544 aa19.18■□□□□ 0.66
HDAC1-210ENST00000490081 RRBP1Q9P2E9 1410 aaKnown RBP19.17■□□□□ 0.66
HDAC1-210ENST00000490081 RICTORQ6R327 1708 aa19.17■□□□□ 0.66
HDAC1-210ENST00000490081 ARHGEF5Q12774 1597 aa19.17■□□□□ 0.66
HDAC1-210ENST00000490081 ZNF644Q9H582 1327 aaPredicted RBP19.17■□□□□ 0.66
HDAC1-210ENST00000490081 POGZQ7Z3K3 1410 aa19.16■□□□□ 0.66
HDAC1-210ENST00000490081 ZNF518AQ6AHZ1 1483 aa19.16■□□□□ 0.66
HDAC1-210ENST00000490081 KDM5CP41229 1560 aa19.14■□□□□ 0.65
HDAC1-210ENST00000490081 HNRNPMP52272 730 aaKnown RBP eCLIP19.13■□□□□ 0.65
HDAC1-210ENST00000490081 ZMYM4Q5VZL5 1548 aa19.13■□□□□ 0.65
HDAC1-210ENST00000490081 SYCP2Q9BX26 1530 aa19.13■□□□□ 0.65
HDAC1-210ENST00000490081 FRMPD1Q5SYB0 1578 aa19.12■□□□□ 0.65
HDAC1-210ENST00000490081 MAGI2Q86UL8 1455 aa19.12■□□□□ 0.65
HDAC1-210ENST00000490081 TRAPPC8Q9Y2L5 1435 aa19.12■□□□□ 0.65
HDAC1-210ENST00000490081 RAPGEF3O95398 923 aa19.11■□□□□ 0.65
HDAC1-210ENST00000490081 MLH3Q9UHC1 1453 aa19.1■□□□□ 0.65
HDAC1-210ENST00000490081 CCDC141Q6ZP82 1450 aa19.09■□□□□ 0.65
HDAC1-210ENST00000490081 RTEL1-TNFRSF6BF6WH68 1400 aa19.09■□□□□ 0.65
HDAC1-210ENST00000490081 AFAP1Q8N556 730 aa19.09■□□□□ 0.65
HDAC1-210ENST00000490081 DNMT1P26358 1616 aaKnown RBP19.08■□□□□ 0.65
HDAC1-210ENST00000490081 MAST1Q9Y2H9 1570 aa19.06■□□□□ 0.64
HDAC1-210ENST00000490081 TSPY4P0CV99 314 aa19.06■□□□□ 0.64
HDAC1-210ENST00000490081 TSPY10P0CW01 314 aa19.06■□□□□ 0.64
HDAC1-210ENST00000490081 ABCC5O15440 1437 aa19.06■□□□□ 0.64
HDAC1-210ENST00000490081 SHANK2Q9UPX8 1470 aa19.05■□□□□ 0.64
HDAC1-210ENST00000490081 DAPK1P53355 1430 aa19.04■□□□□ 0.64
HDAC1-210ENST00000490081 FAM50AQ14320 339 aaKnown RBP19.04■□□□□ 0.64
HDAC1-210ENST00000490081 HECW2Q9P2P5 1572 aa19.04■□□□□ 0.64
HDAC1-210ENST00000490081 SPAG9O60271 1321 aaKnown RBP19.03■□□□□ 0.64
HDAC1-210ENST00000490081 CROCC2H7BZ55 1655 aa19.03■□□□□ 0.64
HDAC1-210ENST00000490081 KIDINS220Q9ULH0 1771 aa19.03■□□□□ 0.64
HDAC1-210ENST00000490081 INO80Q9ULG1 1556 aaPredicted RBP19.02■□□□□ 0.64
HDAC1-210ENST00000490081 ATP7AQ04656 1500 aa19■□□□□ 0.63
HDAC1-210ENST00000490081 ZFYVE16Q7Z3T8 1539 aa18.99■□□□□ 0.63
HDAC1-210ENST00000490081 C9orf84Q5VXU9 1444 aa18.99■□□□□ 0.63
HDAC1-210ENST00000490081 ADGRL2O95490 1459 aa18.98■□□□□ 0.63
HDAC1-210ENST00000490081 REREQ9P2R6 1566 aa18.98■□□□□ 0.63
HDAC1-210ENST00000490081 ARHGEF40Q8TER5 1519 aa18.97■□□□□ 0.63
HDAC1-210ENST00000490081 PLXNC1O60486 1568 aa18.97■□□□□ 0.63
HDAC1-210ENST00000490081 ATP10AO60312 1499 aa18.97■□□□□ 0.63
HDAC1-210ENST00000490081 ROCK1Q13464 1354 aa18.96■□□□□ 0.63
HDAC1-210ENST00000490081 ADAMTSL3P82987 1691 aa18.95■□□□□ 0.62
HDAC1-210ENST00000490081 PTPRKQ15262 1439 aa18.95■□□□□ 0.62
HDAC1-210ENST00000490081 NCOA1Q15788 1441 aa18.95■□□□□ 0.62
HDAC1-210ENST00000490081 YEATS2Q9ULM3 1422 aa18.95■□□□□ 0.62
HDAC1-210ENST00000490081 ADGBQ8N7X0 1667 aa18.95■□□□□ 0.62
HDAC1-210ENST00000490081 ANKRD30AQ9BXX3 1397 aa18.94■□□□□ 0.62
HDAC1-210ENST00000490081 DIP2CQ9Y2E4 1556 aa18.94■□□□□ 0.62
HDAC1-210ENST00000490081 ABCA6Q8N139 1617 aa18.93■□□□□ 0.62
HDAC1-210ENST00000490081 DHX29Q7Z478 1369 aaKnown RBP18.91■□□□□ 0.62
HDAC1-210ENST00000490081 AGLP35573 1532 aa18.9■□□□□ 0.62
HDAC1-210ENST00000490081 MYT1LQ9UL68 1186 aa18.9■□□□□ 0.62
HDAC1-210ENST00000490081 BCORL1Q5H9F3 1711 aa18.9■□□□□ 0.62
HDAC1-210ENST00000490081 A2MP01023 1474 aa18.89■□□□□ 0.61
HDAC1-210ENST00000490081 DUOX2Q9NRD8 1548 aa18.89■□□□□ 0.61
HDAC1-210ENST00000490081 PTPRMP28827 1452 aa18.87■□□□□ 0.61
HDAC1-210ENST00000490081 CHIC2Q9UKJ5 165 aa18.87■□□□□ 0.61
HDAC1-210ENST00000490081 KIF15Q9NS87 1388 aa18.86■□□□□ 0.61
HDAC1-210ENST00000490081 TRIM26Q12899 539 aaPredicted RBP18.86■□□□□ 0.61
HDAC1-210ENST00000490081 ERBINQ96RT1 1412 aa18.84■□□□□ 0.61
HDAC1-210ENST00000490081 ITGAEP38570 1179 aa18.84■□□□□ 0.61
HDAC1-210ENST00000490081 RRP7BPQ9NSQ0 103 aa18.84■□□□□ 0.61
HDAC1-210ENST00000490081 EIF2AK4Q9P2K8 1649 aaKnown RBP18.84■□□□□ 0.61
HDAC1-210ENST00000490081 SIGLEC1Q9BZZ2 1709 aa18.83■□□□□ 0.61
HDAC1-210ENST00000490081 MADDQ8WXG6 1647 aa18.83■□□□□ 0.61
HDAC1-210ENST00000490081 HFM1A2PYH4 1435 aa18.83■□□□□ 0.6
HDAC1-210ENST00000490081 PPP6R1Q9UPN7 881 aa18.82■□□□□ 0.6
HDAC1-210ENST00000490081 ACIN1Q9UKV3 1341 aaKnown RBP18.8■□□□□ 0.6
HDAC1-210ENST00000490081 NAIPQ13075 1403 aa18.8■□□□□ 0.6
HDAC1-210ENST00000490081 ANKRD50Q9ULJ7 1429 aa18.8■□□□□ 0.6
HDAC1-210ENST00000490081 GCC2Q8IWJ2 1684 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms