RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 CDC42BPBQ9Y5S2 1711 aa27.36■■□□□ 1.97
ERCC3-207ENST00000490062 KDM6BO15054 1643 aa27.34■■□□□ 1.97
ERCC3-207ENST00000490062 COL17A1Q9UMD9 1497 aaPredicted RBP27.32■■□□□ 1.96
ERCC3-207ENST00000490062 EFCAB2Q5VUJ9 269 aa27.32■■□□□ 1.96
ERCC3-207ENST00000490062 CCNB3Q8WWL7 1395 aa27.32■■□□□ 1.96
ERCC3-207ENST00000490062 AKNAQ7Z591 1439 aa27.32■■□□□ 1.96
ERCC3-207ENST00000490062 ARHGAP5Q13017 1502 aa27.3■■□□□ 1.96
ERCC3-207ENST00000490062 ITSN2Q9NZM3 1697 aa27.29■■□□□ 1.96
ERCC3-207ENST00000490062 ADGRL1O94910 1474 aa27.23■■□□□ 1.95
ERCC3-207ENST00000490062 DENND4BO75064 1496 aaPredicted RBP27.2■■□□□ 1.95
ERCC3-207ENST00000490062 CFDP1Q9UEE9 299 aaPredicted RBP27.2■■□□□ 1.94
ERCC3-207ENST00000490062 ABCC1P33527 1531 aa27.2■■□□□ 1.94
ERCC3-207ENST00000490062 PLEKHH2Q8IVE3 1493 aa27.19■■□□□ 1.94
ERCC3-207ENST00000490062 MIA2Q96PC5 1412 aa27.19■■□□□ 1.94
ERCC3-207ENST00000490062 KIAA1107Q9UPP5 1409 aa27.19■■□□□ 1.94
ERCC3-207ENST00000490062 SAMD9LQ8IVG5 1584 aa27.18■■□□□ 1.94
ERCC3-207ENST00000490062 MYOM3Q5VTT5 1437 aa27.18■■□□□ 1.94
ERCC3-207ENST00000490062 RICTORQ6R327 1708 aa27.18■■□□□ 1.94
ERCC3-207ENST00000490062 FRMPD1Q5SYB0 1578 aa27.18■■□□□ 1.94
ERCC3-207ENST00000490062 SCAPERQ9BY12 1400 aa27.17■■□□□ 1.94
ERCC3-207ENST00000490062 POGZQ7Z3K3 1410 aa27.16■■□□□ 1.94
ERCC3-207ENST00000490062 ZMYM4Q5VZL5 1548 aa27.14■■□□□ 1.94
ERCC3-207ENST00000490062 ARHGEF12Q9NZN5 1544 aa27.13■■□□□ 1.93
ERCC3-207ENST00000490062 ZNF518AQ6AHZ1 1483 aa27.12■■□□□ 1.93
ERCC3-207ENST00000490062 KDM5CP41229 1560 aa27.1■■□□□ 1.93
ERCC3-207ENST00000490062 RAPGEF3O95398 923 aa27.09■■□□□ 1.93
ERCC3-207ENST00000490062 MAGI2Q86UL8 1455 aa27.08■■□□□ 1.93
ERCC3-207ENST00000490062 MBD5Q9P267 1494 aa27.07■■□□□ 1.92
ERCC3-207ENST00000490062 SYCP2Q9BX26 1530 aa27.07■■□□□ 1.92
ERCC3-207ENST00000490062 CAMSAP2Q08AD1 1489 aa27.06■■□□□ 1.92
ERCC3-207ENST00000490062 FGD6Q6ZV73 1430 aa27.06■■□□□ 1.92
ERCC3-207ENST00000490062 ZNF777Q9ULD5 760 aaPredicted RBP27.05■■□□□ 1.92
ERCC3-207ENST00000490062 TRAPPC8Q9Y2L5 1435 aa27.05■■□□□ 1.92
ERCC3-207ENST00000490062 TCOF1Q13428 1488 aaKnown RBP27.04■■□□□ 1.92
ERCC3-207ENST00000490062 ZNF644Q9H582 1327 aaPredicted RBP27.03■■□□□ 1.92
ERCC3-207ENST00000490062 ARHGEF5Q12774 1597 aa27.02■■□□□ 1.92
ERCC3-207ENST00000490062 MLH3Q9UHC1 1453 aa27.02■■□□□ 1.92
ERCC3-207ENST00000490062 RSPH4AQ5TD94 716 aa27.02■■□□□ 1.92
ERCC3-207ENST00000490062 PTPN23Q9H3S7 1636 aa26.99■■□□□ 1.91
ERCC3-207ENST00000490062 AFAP1Q8N556 730 aa26.99■■□□□ 1.91
ERCC3-207ENST00000490062 HNRNPMP52272 730 aaKnown RBP eCLIP26.98■■□□□ 1.91
ERCC3-207ENST00000490062 HECW2Q9P2P5 1572 aa26.97■■□□□ 1.91
ERCC3-207ENST00000490062 ARHGEF40Q8TER5 1519 aa26.97■■□□□ 1.91
ERCC3-207ENST00000490062 CCDC141Q6ZP82 1450 aa26.96■■□□□ 1.91
ERCC3-207ENST00000490062 ZFYVE16Q7Z3T8 1539 aa26.95■■□□□ 1.9
ERCC3-207ENST00000490062 RTEL1-TNFRSF6BF6WH68 1400 aa26.92■■□□□ 1.9
ERCC3-207ENST00000490062 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.92■■□□□ 1.9
ERCC3-207ENST00000490062 INO80Q9ULG1 1556 aaPredicted RBP26.92■■□□□ 1.9
ERCC3-207ENST00000490062 KIDINS220Q9ULH0 1771 aa26.91■■□□□ 1.9
ERCC3-207ENST00000490062 YEATS2Q9ULM3 1422 aa26.9■■□□□ 1.9
ERCC3-207ENST00000490062 REREQ9P2R6 1566 aa26.88■■□□□ 1.89
ERCC3-207ENST00000490062 MAST1Q9Y2H9 1570 aa26.88■■□□□ 1.89
ERCC3-207ENST00000490062 PPARGC1BQ86YN6 1023 aaKnown RBP26.88■■□□□ 1.89
ERCC3-207ENST00000490062 RRBP1Q9P2E9 1410 aaKnown RBP26.88■■□□□ 1.89
ERCC3-207ENST00000490062 SPAG9O60271 1321 aaKnown RBP26.88■■□□□ 1.89
ERCC3-207ENST00000490062 ATP7AQ04656 1500 aa26.87■■□□□ 1.89
ERCC3-207ENST00000490062 DNMT1P26358 1616 aaKnown RBP26.87■■□□□ 1.89
ERCC3-207ENST00000490062 DIP2CQ9Y2E4 1556 aa26.86■■□□□ 1.89
ERCC3-207ENST00000490062 ATP10AO60312 1499 aa26.86■■□□□ 1.89
ERCC3-207ENST00000490062 SHANK2Q9UPX8 1470 aa26.86■■□□□ 1.89
ERCC3-207ENST00000490062 ABCC5O15440 1437 aa26.84■■□□□ 1.89
ERCC3-207ENST00000490062 ABCA6Q8N139 1617 aa26.84■■□□□ 1.89
ERCC3-207ENST00000490062 CROCC2H7BZ55 1655 aa26.82■■□□□ 1.88
ERCC3-207ENST00000490062 C9orf84Q5VXU9 1444 aa26.82■■□□□ 1.88
ERCC3-207ENST00000490062 DAPK1P53355 1430 aa26.82■■□□□ 1.88
ERCC3-207ENST00000490062 TSPY4P0CV99 314 aa26.81■■□□□ 1.88
ERCC3-207ENST00000490062 TSPY10P0CW01 314 aa26.81■■□□□ 1.88
ERCC3-207ENST00000490062 AGLP35573 1532 aa26.77■■□□□ 1.88
ERCC3-207ENST00000490062 PLXNC1O60486 1568 aa26.76■■□□□ 1.87
ERCC3-207ENST00000490062 ADGBQ8N7X0 1667 aa26.76■■□□□ 1.87
ERCC3-207ENST00000490062 SIGLEC1Q9BZZ2 1709 aa26.73■■□□□ 1.87
ERCC3-207ENST00000490062 FAM50AQ14320 339 aaKnown RBP26.73■■□□□ 1.87
ERCC3-207ENST00000490062 MYT1LQ9UL68 1186 aa26.72■■□□□ 1.87
ERCC3-207ENST00000490062 ADGRL2O95490 1459 aa26.72■■□□□ 1.87
ERCC3-207ENST00000490062 A2MP01023 1474 aa26.72■■□□□ 1.87
ERCC3-207ENST00000490062 DHX29Q7Z478 1369 aaKnown RBP26.69■■□□□ 1.86
ERCC3-207ENST00000490062 PTPRKQ15262 1439 aa26.66■■□□□ 1.86
ERCC3-207ENST00000490062 BCORL1Q5H9F3 1711 aa26.66■■□□□ 1.86
ERCC3-207ENST00000490062 NCOA1Q15788 1441 aa26.65■■□□□ 1.86
ERCC3-207ENST00000490062 ROCK1Q13464 1354 aa26.64■■□□□ 1.86
ERCC3-207ENST00000490062 ANKRD30AQ9BXX3 1397 aa26.64■■□□□ 1.86
ERCC3-207ENST00000490062 DUOX2Q9NRD8 1548 aa26.63■■□□□ 1.85
ERCC3-207ENST00000490062 ADAMTSL3P82987 1691 aa26.63■■□□□ 1.85
ERCC3-207ENST00000490062 KIF15Q9NS87 1388 aa26.6■■□□□ 1.85
ERCC3-207ENST00000490062 EIF2AK4Q9P2K8 1649 aaKnown RBP26.59■■□□□ 1.85
ERCC3-207ENST00000490062 ARID4BQ4LE39 1312 aaPredicted RBP26.59■■□□□ 1.85
ERCC3-207ENST00000490062 ERBINQ96RT1 1412 aa26.57■■□□□ 1.84
ERCC3-207ENST00000490062 KDM4FA0A1W2PPD8 638 aa26.57■■□□□ 1.84
ERCC3-207ENST00000490062 CHIC2Q9UKJ5 165 aa26.54■■□□□ 1.84
ERCC3-207ENST00000490062 PPP6R1Q9UPN7 881 aa26.53■■□□□ 1.84
ERCC3-207ENST00000490062 RRP7BPQ9NSQ0 103 aa26.52■■□□□ 1.84
ERCC3-207ENST00000490062 FAM135AQ9P2D6 1515 aa26.52■■□□□ 1.84
ERCC3-207ENST00000490062 RNF17Q9BXT8 1623 aaKnown RBP26.51■■□□□ 1.83
ERCC3-207ENST00000490062 MADDQ8WXG6 1647 aa26.49■■□□□ 1.83
ERCC3-207ENST00000490062 ANKRD50Q9ULJ7 1429 aa26.47■■□□□ 1.83
ERCC3-207ENST00000490062 FER1L4A9Z1Z3 1794 aa26.46■■□□□ 1.83
ERCC3-207ENST00000490062 KIF3BO15066 747 aa26.46■■□□□ 1.83
ERCC3-207ENST00000490062 DEPDC5O75140 1603 aa26.45■■□□□ 1.82
ERCC3-207ENST00000490062 CNTLNQ9NXG0 1405 aa26.45■■□□□ 1.82
ERCC3-207ENST00000490062 ITGAEP38570 1179 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms