RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 ITSN2Q9NZM3 1697 aa29.97■■■□□ 2.39
CCM2-216ENST00000488727 ARHGAP5Q13017 1502 aa29.97■■■□□ 2.39
CCM2-216ENST00000488727 PCGF6Q9BYE7 350 aa29.96■■■□□ 2.39
CCM2-216ENST00000488727 CFAP74Q9C0B2 1584 aa29.93■■■□□ 2.38
CCM2-216ENST00000488727 NEO1Q92859 1461 aa29.93■■■□□ 2.38
CCM2-216ENST00000488727 PHLDB1Q86UU1 1377 aa29.91■■■□□ 2.38
CCM2-216ENST00000488727 EFCAB2Q5VUJ9 269 aa29.88■■■□□ 2.37
CCM2-216ENST00000488727 AKNAQ7Z591 1439 aa29.88■■■□□ 2.37
CCM2-216ENST00000488727 MYOM3Q5VTT5 1437 aa29.87■■■□□ 2.37
CCM2-216ENST00000488727 CFDP1Q9UEE9 299 aaPredicted RBP29.87■■■□□ 2.37
CCM2-216ENST00000488727 SAMD9LQ8IVG5 1584 aa29.86■■■□□ 2.37
CCM2-216ENST00000488727 COL17A1Q9UMD9 1497 aaPredicted RBP29.85■■■□□ 2.37
CCM2-216ENST00000488727 KDM6BO15054 1643 aa29.83■■■□□ 2.37
CCM2-216ENST00000488727 ADGRL1O94910 1474 aa29.82■■■□□ 2.36
CCM2-216ENST00000488727 TRIM26Q12899 539 aaPredicted RBP29.82■■■□□ 2.36
CCM2-216ENST00000488727 ZNF777Q9ULD5 760 aaPredicted RBP29.82■■■□□ 2.36
CCM2-216ENST00000488727 ABCC1P33527 1531 aa29.8■■■□□ 2.36
CCM2-216ENST00000488727 HRCP23327 699 aa29.79■■■□□ 2.36
CCM2-216ENST00000488727 ZNF644Q9H582 1327 aaPredicted RBP29.79■■■□□ 2.36
CCM2-216ENST00000488727 MIA2Q96PC5 1412 aa29.78■■■□□ 2.36
CCM2-216ENST00000488727 ARHGEF12Q9NZN5 1544 aa29.77■■■□□ 2.36
CCM2-216ENST00000488727 SCAPERQ9BY12 1400 aa29.77■■■□□ 2.36
CCM2-216ENST00000488727 FGD6Q6ZV73 1430 aa29.76■■■□□ 2.35
CCM2-216ENST00000488727 CAMSAP2Q08AD1 1489 aa29.75■■■□□ 2.35
CCM2-216ENST00000488727 SYCP2Q9BX26 1530 aa29.74■■■□□ 2.35
CCM2-216ENST00000488727 FRMPD1Q5SYB0 1578 aa29.74■■■□□ 2.35
CCM2-216ENST00000488727 RICTORQ6R327 1708 aa29.74■■■□□ 2.35
CCM2-216ENST00000488727 DENND4BO75064 1496 aaPredicted RBP29.72■■■□□ 2.35
CCM2-216ENST00000488727 PTPN23Q9H3S7 1636 aa29.72■■■□□ 2.35
CCM2-216ENST00000488727 PLEKHH2Q8IVE3 1493 aa29.71■■■□□ 2.35
CCM2-216ENST00000488727 RAPGEF3O95398 923 aa29.71■■■□□ 2.35
CCM2-216ENST00000488727 KIAA1107Q9UPP5 1409 aa29.7■■■□□ 2.35
CCM2-216ENST00000488727 POGZQ7Z3K3 1410 aa29.69■■■□□ 2.34
CCM2-216ENST00000488727 TRAPPC8Q9Y2L5 1435 aa29.67■■■□□ 2.34
CCM2-216ENST00000488727 TCOF1Q13428 1488 aaKnown RBP29.67■■■□□ 2.34
CCM2-216ENST00000488727 HNRNPMP52272 730 aaKnown RBP eCLIP29.67■■■□□ 2.342e-6■■■□□ 15.7
CCM2-216ENST00000488727 MBD5Q9P267 1494 aa29.66■■■□□ 2.34
CCM2-216ENST00000488727 ZNF518AQ6AHZ1 1483 aa29.64■■■□□ 2.34
CCM2-216ENST00000488727 KDM5CP41229 1560 aa29.62■■■□□ 2.33
CCM2-216ENST00000488727 AFAP1Q8N556 730 aa29.62■■■□□ 2.33
CCM2-216ENST00000488727 ZMYM4Q5VZL5 1548 aa29.6■■■□□ 2.33
CCM2-216ENST00000488727 ARHGEF5Q12774 1597 aa29.6■■■□□ 2.33
CCM2-216ENST00000488727 RRBP1Q9P2E9 1410 aaKnown RBP29.57■■■□□ 2.32
CCM2-216ENST00000488727 CCDC141Q6ZP82 1450 aa29.56■■■□□ 2.32
CCM2-216ENST00000488727 FAM50AQ14320 339 aaKnown RBP29.54■■■□□ 2.32
CCM2-216ENST00000488727 DNMT1P26358 1616 aaKnown RBP29.54■■■□□ 2.32
CCM2-216ENST00000488727 HECW2Q9P2P5 1572 aa29.53■■■□□ 2.32
CCM2-216ENST00000488727 CROCC2H7BZ55 1655 aa29.5■■■□□ 2.31
CCM2-216ENST00000488727 MLH3Q9UHC1 1453 aa29.5■■■□□ 2.31
CCM2-216ENST00000488727 KIDINS220Q9ULH0 1771 aa29.5■■■□□ 2.31
CCM2-216ENST00000488727 INO80Q9ULG1 1556 aaPredicted RBP29.49■■■□□ 2.31
CCM2-216ENST00000488727 RSPH4AQ5TD94 716 aa29.49■■■□□ 2.31
CCM2-216ENST00000488727 ABCC5O15440 1437 aa29.49■■■□□ 2.31
CCM2-216ENST00000488727 DAPK1P53355 1430 aa29.48■■■□□ 2.31
CCM2-216ENST00000488727 YEATS2Q9ULM3 1422 aa29.48■■■□□ 2.31
CCM2-216ENST00000488727 MAGI2Q86UL8 1455 aa29.48■■■□□ 2.31
CCM2-216ENST00000488727 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.48■■■□□ 2.314e-9■■■□□ 16.7
CCM2-216ENST00000488727 ZFYVE16Q7Z3T8 1539 aa29.48■■■□□ 2.31
CCM2-216ENST00000488727 ARHGEF40Q8TER5 1519 aa29.46■■■□□ 2.31
CCM2-216ENST00000488727 SPAG9O60271 1321 aaKnown RBP29.46■■■□□ 2.31
CCM2-216ENST00000488727 ATP7AQ04656 1500 aa29.46■■■□□ 2.31
CCM2-216ENST00000488727 ABCA6Q8N139 1617 aa29.44■■■□□ 2.3
CCM2-216ENST00000488727 MAST1Q9Y2H9 1570 aa29.43■■■□□ 2.3
CCM2-216ENST00000488727 SHANK2Q9UPX8 1470 aa29.42■■■□□ 2.3
CCM2-216ENST00000488727 DIP2CQ9Y2E4 1556 aa29.41■■■□□ 2.3
CCM2-216ENST00000488727 RTEL1-TNFRSF6BF6WH68 1400 aa29.41■■■□□ 2.3
CCM2-216ENST00000488727 C9orf84Q5VXU9 1444 aa29.41■■■□□ 2.3
CCM2-216ENST00000488727 TSPY4P0CV99 314 aa29.4■■■□□ 2.3
CCM2-216ENST00000488727 TSPY10P0CW01 314 aa29.4■■■□□ 2.3
CCM2-216ENST00000488727 MYT1LQ9UL68 1186 aa29.4■■■□□ 2.3
CCM2-216ENST00000488727 PTPRKQ15262 1439 aa29.38■■■□□ 2.29
CCM2-216ENST00000488727 ADGBQ8N7X0 1667 aa29.35■■■□□ 2.29
CCM2-216ENST00000488727 ATP10AO60312 1499 aa29.34■■■□□ 2.29
CCM2-216ENST00000488727 SIGLEC1Q9BZZ2 1709 aa29.34■■■□□ 2.29
CCM2-216ENST00000488727 PLXNC1O60486 1568 aa29.33■■■□□ 2.29
CCM2-216ENST00000488727 ITGAEP38570 1179 aa29.33■■■□□ 2.29
CCM2-216ENST00000488727 CHIC2Q9UKJ5 165 aa29.32■■■□□ 2.28
CCM2-216ENST00000488727 ADGRL2O95490 1459 aa29.29■■■□□ 2.28
CCM2-216ENST00000488727 REREQ9P2R6 1566 aa29.28■■■□□ 2.28
CCM2-216ENST00000488727 NCOA1Q15788 1441 aa29.26■■■□□ 2.27
CCM2-216ENST00000488727 A2MP01023 1474 aa29.25■■■□□ 2.27
CCM2-216ENST00000488727 ANKRD30AQ9BXX3 1397 aa29.24■■■□□ 2.27
CCM2-216ENST00000488727 RRP7BPQ9NSQ0 103 aa29.22■■■□□ 2.27
CCM2-216ENST00000488727 KIF15Q9NS87 1388 aa29.22■■■□□ 2.27
CCM2-216ENST00000488727 ROCK1Q13464 1354 aa29.2■■■□□ 2.27
CCM2-216ENST00000488727 DHX29Q7Z478 1369 aaKnown RBP29.2■■■□□ 2.26
CCM2-216ENST00000488727 DUOX2Q9NRD8 1548 aa29.19■■■□□ 2.26
CCM2-216ENST00000488727 AGLP35573 1532 aa29.18■■■□□ 2.26
CCM2-216ENST00000488727 ARID4BQ4LE39 1312 aaPredicted RBP29.14■■■□□ 2.26
CCM2-216ENST00000488727 BCORL1Q5H9F3 1711 aa29.11■■■□□ 2.25
CCM2-216ENST00000488727 EIF2AK4Q9P2K8 1649 aaKnown RBP29.11■■■□□ 2.25
CCM2-216ENST00000488727 ERBINQ96RT1 1412 aa29.11■■■□□ 2.25
CCM2-216ENST00000488727 GCC2Q8IWJ2 1684 aa29.08■■■□□ 2.25
CCM2-216ENST00000488727 ANKRD50Q9ULJ7 1429 aa29.07■■■□□ 2.24
CCM2-216ENST00000488727 NAIPQ13075 1403 aa29.06■■■□□ 2.24
CCM2-216ENST00000488727 KIF3BO15066 747 aa29.06■■■□□ 2.24
CCM2-216ENST00000488727 HFM1A2PYH4 1435 aa29.05■■■□□ 2.24
CCM2-216ENST00000488727 MLECQ14165 292 aa29.05■■■□□ 2.24
CCM2-216ENST00000488727 ZEB1P37275 1124 aaPredicted RBP29.04■■■□□ 2.24
CCM2-216ENST00000488727 RNF17Q9BXT8 1623 aaKnown RBP29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms