RNA–Protein interactions for RNA: ENST00000488687.5

PSME4-209, Transcript of proteasome activator subunit 4, humanhuman

TSL 2

Gene PSME4, Length 3,073 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-209ENST00000488687 NCOA2Q15596 1464 aa9.09□□□□□ -0.95
PSME4-209ENST00000488687 CDK11AQ9UQ88 783 aaPredicted RBP9.08□□□□□ -0.96
PSME4-209ENST00000488687 SHROOM2Q13796 1616 aa9.08□□□□□ -0.96
PSME4-209ENST00000488687 CDK13Q14004 1512 aaKnown RBP9.08□□□□□ -0.96
PSME4-209ENST00000488687 FGD6Q6ZV73 1430 aa9.08□□□□□ -0.96
PSME4-209ENST00000488687 RAPGEF6Q8TEU7 1601 aa9.08□□□□□ -0.96
PSME4-209ENST00000488687 U3KPZ7 1027 aaPredicted RBP9.08□□□□□ -0.96
PSME4-209ENST00000488687 MYOM3Q5VTT5 1437 aa9.07□□□□□ -0.96
PSME4-209ENST00000488687 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.06□□□□□ -0.96
PSME4-209ENST00000488687 KIF13AQ9H1H9 1805 aa9.06□□□□□ -0.96
PSME4-209ENST00000488687 SETD5Q9C0A6 1442 aa9.06□□□□□ -0.96
PSME4-209ENST00000488687 MAGI3Q5TCQ9 1506 aa9.05□□□□□ -0.96
PSME4-209ENST00000488687 DHX57Q6P158 1386 aaKnown RBP9.05□□□□□ -0.96
PSME4-209ENST00000488687 RAB3GAP2Q9H2M9 1393 aa9.05□□□□□ -0.96
PSME4-209ENST00000488687 CLSPNQ9HAW4 1339 aa9.05□□□□□ -0.96
PSME4-209ENST00000488687 NUP153P49790 1475 aaKnown RBP9.05□□□□□ -0.96
PSME4-209ENST00000488687 PLB1Q6P1J6 1458 aa9.04□□□□□ -0.96
PSME4-209ENST00000488687 PRG4Q92954 1404 aaPredicted RBP9.03□□□□□ -0.96
PSME4-209ENST00000488687 PTPN23Q9H3S7 1636 aa9.02□□□□□ -0.96
PSME4-209ENST00000488687 PTPRGP23470 1445 aa9□□□□□ -0.97
PSME4-209ENST00000488687 PLEKHD1A6NEE1 506 aa8.99□□□□□ -0.97
PSME4-209ENST00000488687 MIA2Q96PC5 1412 aa8.99□□□□□ -0.97
PSME4-209ENST00000488687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.99□□□□□ -0.97
PSME4-209ENST00000488687 TROQ12816 1431 aaPredicted RBP8.99□□□□□ -0.97
PSME4-209ENST00000488687 DCAF8L1A6NGE4 600 aa8.98□□□□□ -0.97
PSME4-209ENST00000488687 CHIC2Q9UKJ5 165 aa8.98□□□□□ -0.97
PSME4-209ENST00000488687 ABCA8O94911 1581 aa8.98□□□□□ -0.97
PSME4-209ENST00000488687 TCOF1Q13428 1488 aaKnown RBP8.97□□□□□ -0.97
PSME4-209ENST00000488687 IQSEC2Q5JU85 1478 aa8.96□□□□□ -0.97
PSME4-209ENST00000488687 PTPRKQ15262 1439 aa8.96□□□□□ -0.97
PSME4-209ENST00000488687 SPATA31D1Q6ZQQ2 1576 aa8.96□□□□□ -0.97
PSME4-209ENST00000488687 ZNF316A6NFI3 1004 aaPredicted RBP8.96□□□□□ -0.98
PSME4-209ENST00000488687 CFDP1Q9UEE9 299 aaPredicted RBP8.96□□□□□ -0.98
PSME4-209ENST00000488687 HFM1A2PYH4 1435 aa8.96□□□□□ -0.98
PSME4-209ENST00000488687 ADCY10Q96PN6 1610 aa8.96□□□□□ -0.98
PSME4-209ENST00000488687 RRP7BPQ9NSQ0 103 aa8.96□□□□□ -0.98
PSME4-209ENST00000488687 ZNF777Q9ULD5 760 aaPredicted RBP8.95□□□□□ -0.98
PSME4-209ENST00000488687 ATP10BO94823 1461 aa8.95□□□□□ -0.98
PSME4-209ENST00000488687 DIP2BQ9P265 1576 aa8.95□□□□□ -0.98
PSME4-209ENST00000488687 ITSN2Q9NZM3 1697 aa8.94□□□□□ -0.98
PSME4-209ENST00000488687 UACAQ9BZF9 1416 aa8.94□□□□□ -0.98
PSME4-209ENST00000488687 MAPKBP1O60336 1514 aa8.93□□□□□ -0.98
PSME4-209ENST00000488687 NAIPQ13075 1403 aa8.93□□□□□ -0.98
PSME4-209ENST00000488687 NEUROD1Q13562 356 aa8.93□□□□□ -0.98
PSME4-209ENST00000488687 DIEXFQ68CQ4 756 aaKnown RBP8.93□□□□□ -0.98
PSME4-209ENST00000488687 SAMD1Q6SPF0 538 aaPredicted RBP8.93□□□□□ -0.98
PSME4-209ENST00000488687 KIF14Q15058 1648 aa8.93□□□□□ -0.98
PSME4-209ENST00000488687 ZNF644Q9H582 1327 aaPredicted RBP8.93□□□□□ -0.98
PSME4-209ENST00000488687 ABCC10Q5T3U5 1492 aa8.92□□□□□ -0.98
PSME4-209ENST00000488687 TSPOAP1O95153 1857 aa8.92□□□□□ -0.98
PSME4-209ENST00000488687 TRIM52Q96A61 297 aa8.92□□□□□ -0.98
PSME4-209ENST00000488687 GLI2P10070 1586 aa8.92□□□□□ -0.98
PSME4-209ENST00000488687 DAPK1P53355 1430 aa8.91□□□□□ -0.98
PSME4-209ENST00000488687 PCDH10Q9P2E7 1040 aa8.91□□□□□ -0.98
PSME4-209ENST00000488687 GPATCH8Q9UKJ3 1502 aaKnown RBP8.91□□□□□ -0.98
PSME4-209ENST00000488687 MKRN4PQ13434 485 aaPredicted RBP8.91□□□□□ -0.98
PSME4-209ENST00000488687 CAMSAP2Q08AD1 1489 aa8.9□□□□□ -0.98
PSME4-209ENST00000488687 SIN3AQ96ST3 1273 aa8.9□□□□□ -0.98
PSME4-209ENST00000488687 ZNF219Q9P2Y4 722 aaPredicted RBP8.9□□□□□ -0.98
PSME4-209ENST00000488687 DNMT1P26358 1616 aaKnown RBP8.9□□□□□ -0.99
PSME4-209ENST00000488687 GCC2Q8IWJ2 1684 aa8.89□□□□□ -0.99
PSME4-209ENST00000488687 AKNAQ7Z591 1439 aa8.89□□□□□ -0.99
PSME4-209ENST00000488687 FAM69CQ0P6D2 419 aa8.89□□□□□ -0.99
PSME4-209ENST00000488687 ABCC5O15440 1437 aa8.89□□□□□ -0.99
PSME4-209ENST00000488687 ABCC2Q92887 1545 aa8.88□□□□□ -0.99
PSME4-209ENST00000488687 ROCK1Q13464 1354 aa8.88□□□□□ -0.99
PSME4-209ENST00000488687 ACIN1Q9UKV3 1341 aaKnown RBP8.87□□□□□ -0.99
PSME4-209ENST00000488687 CDC42BPAQ5VT25 1732 aa8.87□□□□□ -0.99
PSME4-209ENST00000488687 KCNH8Q96L42 1107 aa8.87□□□□□ -0.99
PSME4-209ENST00000488687 TIMELESSQ9UNS1 1208 aa8.86□□□□□ -0.99
PSME4-209ENST00000488687 NPM1P06748 294 aaKnown RBP eCLIP8.86□□□□□ -0.99
PSME4-209ENST00000488687 TSPY4P0CV99 314 aa8.86□□□□□ -0.99
PSME4-209ENST00000488687 TSPY10P0CW01 314 aa8.86□□□□□ -0.99
PSME4-209ENST00000488687 PROM2Q8N271 834 aa8.85□□□□□ -0.99
PSME4-209ENST00000488687 TONSLQ96HA7 1378 aa8.85□□□□□ -0.99
PSME4-209ENST00000488687 ANKRD30AQ9BXX3 1397 aa8.84□□□□□ -0.99
PSME4-209ENST00000488687 ADGBQ8N7X0 1667 aa8.84□□□□□ -0.99
PSME4-209ENST00000488687 MPHOSPH9Q99550 1183 aa8.84□□□□□ -0.99
PSME4-209ENST00000488687 PPRC1Q5VV67 1664 aaKnown RBP8.83□□□□□ -1
PSME4-209ENST00000488687 HNRNPMP52272 730 aaKnown RBP eCLIP8.83□□□□□ -1
PSME4-209ENST00000488687 UHRF1BP1LA0JNW5 1464 aa8.83□□□□□ -1
PSME4-209ENST00000488687 ZCCHC11Q5TAX3 1644 aaKnown RBP8.83□□□□□ -1
PSME4-209ENST00000488687 ERICH6Q7L0X2 663 aa8.83□□□□□ -1
PSME4-209ENST00000488687 CROCC2H7BZ55 1655 aa8.82□□□□□ -1
PSME4-209ENST00000488687 ARHGAP5Q13017 1502 aa8.82□□□□□ -1
PSME4-209ENST00000488687 NCOA1Q15788 1441 aa8.82□□□□□ -1
PSME4-209ENST00000488687 PREX2Q70Z35 1606 aa8.82□□□□□ -1
PSME4-209ENST00000488687 RSPH4AQ5TD94 716 aa8.81□□□□□ -1
PSME4-209ENST00000488687 C9orf84Q5VXU9 1444 aa8.81□□□□□ -1
PSME4-209ENST00000488687 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.81□□□□□ -1
PSME4-209ENST00000488687 KDM5BQ9UGL1 1544 aa8.81□□□□□ -1
PSME4-209ENST00000488687 CDC42BPBQ9Y5S2 1711 aa8.81□□□□□ -1
PSME4-209ENST00000488687 TTC37Q6PGP7 1564 aa8.81□□□□□ -1
PSME4-209ENST00000488687 SPDYE4A6NLX3 237 aa8.81□□□□□ -1
PSME4-209ENST00000488687 ADGRL2O95490 1459 aa8.81□□□□□ -1
PSME4-209ENST00000488687 PPP1R15AO75807 674 aaPredicted RBP8.8□□□□□ -1
PSME4-209ENST00000488687 MYO5CQ9NQX4 1742 aa8.8□□□□□ -1
PSME4-209ENST00000488687 SHANK2Q9UPX8 1470 aa8.8□□□□□ -1
PSME4-209ENST00000488687 KDM4FA0A1W2PPD8 638 aa8.79□□□□□ -1
PSME4-209ENST00000488687 SAMD9LQ8IVG5 1584 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms