RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 ADGRL1O94910 1474 aa4.89□□□□□ -1.63
DEPDC1-203ENST00000488146 ARHGEF40Q8TER5 1519 aa4.89□□□□□ -1.63
DEPDC1-203ENST00000488146 ATXN8OSP0DMR3 200 aa4.88□□□□□ -1.63
DEPDC1-203ENST00000488146 BCORL1Q5H9F3 1711 aa4.88□□□□□ -1.63
DEPDC1-203ENST00000488146 CARMIL1Q5VZK9 1371 aa4.87□□□□□ -1.63
DEPDC1-203ENST00000488146 PRXQ9BXM0 1461 aa4.87□□□□□ -1.63
DEPDC1-203ENST00000488146 ZBTB12Q9Y330 459 aaPredicted RBP4.87□□□□□ -1.63
DEPDC1-203ENST00000488146 FHOD3Q2V2M9 1422 aa4.86□□□□□ -1.63
DEPDC1-203ENST00000488146 TTC37Q6PGP7 1564 aa4.86□□□□□ -1.63
DEPDC1-203ENST00000488146 HECW2Q9P2P5 1572 aa4.86□□□□□ -1.63
DEPDC1-203ENST00000488146 FBLN2P98095 1184 aa4.85□□□□□ -1.63
DEPDC1-203ENST00000488146 MROH2AA6NES4 1674 aa4.84□□□□□ -1.63
DEPDC1-203ENST00000488146 RAPGEF6Q8TEU7 1601 aa4.84□□□□□ -1.63
DEPDC1-203ENST00000488146 CHRDL2Q6WN34 429 aa4.84□□□□□ -1.63
DEPDC1-203ENST00000488146 FRMPD1Q5SYB0 1578 aa4.84□□□□□ -1.63
DEPDC1-203ENST00000488146 RICTORQ6R327 1708 aa4.84□□□□□ -1.63
DEPDC1-203ENST00000488146 AGLP35573 1532 aa4.84□□□□□ -1.63
DEPDC1-203ENST00000488146 KIF21BO75037 1637 aa4.84□□□□□ -1.64
DEPDC1-203ENST00000488146 FAM69CQ0P6D2 419 aa4.82□□□□□ -1.64
DEPDC1-203ENST00000488146 PCF11O94913 1555 aaKnown RBP4.82□□□□□ -1.64
DEPDC1-203ENST00000488146 FANCAO15360 1455 aa4.82□□□□□ -1.64
DEPDC1-203ENST00000488146 POGZQ7Z3K3 1410 aa4.82□□□□□ -1.64
DEPDC1-203ENST00000488146 PREX1Q8TCU6 1659 aa4.82□□□□□ -1.64
DEPDC1-203ENST00000488146 ARHGEF12Q9NZN5 1544 aa4.82□□□□□ -1.64
DEPDC1-203ENST00000488146 KDM4FA0A1W2PPD8 638 aa4.81□□□□□ -1.64
DEPDC1-203ENST00000488146 AKT1S1Q96B36 256 aa4.81□□□□□ -1.64
DEPDC1-203ENST00000488146 FAM9AQ8IZU1 332 aaPredicted RBP4.81□□□□□ -1.64
DEPDC1-203ENST00000488146 KDM5CP41229 1560 aa4.81□□□□□ -1.64
DEPDC1-203ENST00000488146 CD109Q6YHK3 1445 aa4.81□□□□□ -1.64
DEPDC1-203ENST00000488146 TSPOAP1O95153 1857 aa4.8□□□□□ -1.64
DEPDC1-203ENST00000488146 PTPRTO14522 1441 aa4.8□□□□□ -1.64
DEPDC1-203ENST00000488146 ZNF142P52746 1687 aaPredicted RBP4.79□□□□□ -1.64
DEPDC1-203ENST00000488146 AKNAQ7Z591 1439 aa4.79□□□□□ -1.64
DEPDC1-203ENST00000488146 ZFYVE16Q7Z3T8 1539 aa4.79□□□□□ -1.64
DEPDC1-203ENST00000488146 PTPRMP28827 1452 aa4.78□□□□□ -1.64
DEPDC1-203ENST00000488146 LMTK3Q96Q04 1460 aa4.78□□□□□ -1.64
DEPDC1-203ENST00000488146 HECW1Q76N89 1606 aa4.78□□□□□ -1.64
DEPDC1-203ENST00000488146 CNTLNQ9NXG0 1405 aa4.78□□□□□ -1.64
DEPDC1-203ENST00000488146 FER1L4A9Z1Z3 1794 aa4.78□□□□□ -1.64
DEPDC1-203ENST00000488146 COL17A1Q9UMD9 1497 aaPredicted RBP4.78□□□□□ -1.64
DEPDC1-203ENST00000488146 FBXO41Q8TF61 875 aa4.78□□□□□ -1.64
DEPDC1-203ENST00000488146 NPATQ14207 1427 aa4.77□□□□□ -1.65
DEPDC1-203ENST00000488146 DENND4BO75064 1496 aaPredicted RBP4.77□□□□□ -1.65
DEPDC1-203ENST00000488146 ATP10BO94823 1461 aa4.77□□□□□ -1.65
DEPDC1-203ENST00000488146 MYO5CQ9NQX4 1742 aa4.77□□□□□ -1.65
DEPDC1-203ENST00000488146 REM2Q8IYK8 340 aaPredicted RBP4.77□□□□□ -1.65
DEPDC1-203ENST00000488146 C9orf84Q5VXU9 1444 aa4.76□□□□□ -1.65
DEPDC1-203ENST00000488146 MLH3Q9UHC1 1453 aa4.76□□□□□ -1.65
DEPDC1-203ENST00000488146 CCDC18Q5T9S5 1454 aa4.75□□□□□ -1.65
DEPDC1-203ENST00000488146 MADDQ8WXG6 1647 aa4.75□□□□□ -1.65
DEPDC1-203ENST00000488146 MKRN4PQ13434 485 aaPredicted RBP4.75□□□□□ -1.65
DEPDC1-203ENST00000488146 PLA2R1Q13018 1463 aa4.75□□□□□ -1.65
DEPDC1-203ENST00000488146 PLEKHH2Q8IVE3 1493 aa4.75□□□□□ -1.65
DEPDC1-203ENST00000488146 NUP153P49790 1475 aaKnown RBP4.74□□□□□ -1.65
DEPDC1-203ENST00000488146 PREX2Q70Z35 1606 aa4.74□□□□□ -1.65
DEPDC1-203ENST00000488146 ITSN2Q9NZM3 1697 aa4.74□□□□□ -1.65
DEPDC1-203ENST00000488146 KIF14Q15058 1648 aa4.74□□□□□ -1.65
DEPDC1-203ENST00000488146 ATP10AO60312 1499 aa4.74□□□□□ -1.65
DEPDC1-203ENST00000488146 PLCH2O75038 1416 aa4.74□□□□□ -1.65
DEPDC1-203ENST00000488146 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.73□□□□□ -1.65
DEPDC1-203ENST00000488146 ZNF518AQ6AHZ1 1483 aa4.73□□□□□ -1.65
DEPDC1-203ENST00000488146 FMN1Q68DA7 1419 aa4.73□□□□□ -1.65
DEPDC1-203ENST00000488146 SPDYE4A6NLX3 237 aa4.73□□□□□ -1.65
DEPDC1-203ENST00000488146 RIMS1Q86UR5 1692 aaKnown RBP4.73□□□□□ -1.65
DEPDC1-203ENST00000488146 PLXNC1O60486 1568 aa4.72□□□□□ -1.65
DEPDC1-203ENST00000488146 PITPNM1O00562 1244 aa4.72□□□□□ -1.65
DEPDC1-203ENST00000488146 PIP4P2Q8N4L2 257 aa4.72□□□□□ -1.65
DEPDC1-203ENST00000488146 KDM5AP29375 1690 aaKnown RBP4.72□□□□□ -1.65
DEPDC1-203ENST00000488146 ABCC1P33527 1531 aa4.71□□□□□ -1.65
DEPDC1-203ENST00000488146 SETD1BQ9UPS6 1966 aaKnown RBP4.71□□□□□ -1.65
DEPDC1-203ENST00000488146 DIP2CQ9Y2E4 1556 aa4.71□□□□□ -1.66
DEPDC1-203ENST00000488146 ZC3H13Q5T200 1668 aaKnown RBP4.71□□□□□ -1.66
DEPDC1-203ENST00000488146 ADGBQ8N7X0 1667 aa4.71□□□□□ -1.66
DEPDC1-203ENST00000488146 KIAA1107Q9UPP5 1409 aa4.71□□□□□ -1.66
DEPDC1-203ENST00000488146 DEPDC5O75140 1603 aa4.7□□□□□ -1.66
DEPDC1-203ENST00000488146 SPDYE2BA6NHP3 402 aa4.7□□□□□ -1.66
DEPDC1-203ENST00000488146 SPDYE6P0CI01 402 aa4.7□□□□□ -1.66
DEPDC1-203ENST00000488146 PRKCSHP14314 528 aaPredicted RBP4.7□□□□□ -1.66
DEPDC1-203ENST00000488146 SPDYE2Q495Y8 402 aa4.7□□□□□ -1.66
DEPDC1-203ENST00000488146 SYNMO15061 1565 aa4.7□□□□□ -1.66
DEPDC1-203ENST00000488146 CLIP1P30622 1438 aa4.7□□□□□ -1.66
DEPDC1-203ENST00000488146 INO80Q9ULG1 1556 aaPredicted RBP4.7□□□□□ -1.66
DEPDC1-203ENST00000488146 YEATS2Q9ULM3 1422 aa4.7□□□□□ -1.66
DEPDC1-203ENST00000488146 IFNLR1Q8IU57 520 aaPredicted RBP4.69□□□□□ -1.66
DEPDC1-203ENST00000488146 CPS1P31327 1500 aa4.69□□□□□ -1.66
DEPDC1-203ENST00000488146 HAP1P54257 671 aaPredicted RBP4.69□□□□□ -1.66
DEPDC1-203ENST00000488146 EIF2AK4Q9P2K8 1649 aaKnown RBP4.69□□□□□ -1.66
DEPDC1-203ENST00000488146 CAMSAP2Q08AD1 1489 aa4.69□□□□□ -1.66
DEPDC1-203ENST00000488146 TROQ12816 1431 aaPredicted RBP4.69□□□□□ -1.66
DEPDC1-203ENST00000488146 FYCO1Q9BQS8 1478 aa4.68□□□□□ -1.66
DEPDC1-203ENST00000488146 MAST1Q9Y2H9 1570 aa4.68□□□□□ -1.66
DEPDC1-203ENST00000488146 RTEL1-TNFRSF6BF6WH68 1400 aa4.68□□□□□ -1.66
DEPDC1-203ENST00000488146 LTBP4Q8N2S1 1624 aa4.68□□□□□ -1.66
DEPDC1-203ENST00000488146 VASPP50552 380 aaPredicted RBP4.68□□□□□ -1.66
DEPDC1-203ENST00000488146 FXR2P51116 673 aaKnown RBP eCLIP4.68□□□□□ -1.66
DEPDC1-203ENST00000488146 PLCB2Q00722 1185 aa4.68□□□□□ -1.66
DEPDC1-203ENST00000488146 STRCQ7RTU9 1775 aa4.68□□□□□ -1.66
DEPDC1-203ENST00000488146 KDM5DQ9BY66 1539 aa4.68□□□□□ -1.66
DEPDC1-203ENST00000488146 C3P01024 1663 aa4.68□□□□□ -1.66
DEPDC1-203ENST00000488146 SP7Q8TDD2 431 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms