RNA–Protein interactions for RNA: ENST00000486715.5

GFM1-210, Transcript of G elongation factor mitochondrial 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GFM1, Length 3,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-210ENST00000486715 RIMBP3Q9UFD9 1639 aa13.46□□□□□ -0.25
GFM1-210ENST00000486715 RGS3P49796 1198 aa13.46□□□□□ -0.26
GFM1-210ENST00000486715 TCERG1O14776 1098 aaKnown RBP13.45□□□□□ -0.26
GFM1-210ENST00000486715 RSPH6AQ9H0K4 717 aa13.43□□□□□ -0.26
GFM1-210ENST00000486715 BACH2Q9BYV9 841 aa13.43□□□□□ -0.26
GFM1-210ENST00000486715 POLA1P09884 1462 aaPredicted RBP13.43□□□□□ -0.26
GFM1-210ENST00000486715 DDRGK1Q96HY6 314 aa13.43□□□□□ -0.26
GFM1-210ENST00000486715 L3MBTL2Q969R5 705 aa13.42□□□□□ -0.26
GFM1-210ENST00000486715 ZNF608Q9ULD9 1512 aaPredicted RBP13.42□□□□□ -0.26
GFM1-210ENST00000486715 WASHC2CQ9Y4E1 1318 aa13.42□□□□□ -0.26
GFM1-210ENST00000486715 CLASP1Q7Z460 1538 aa13.42□□□□□ -0.26
GFM1-210ENST00000486715 DCAF11Q8TEB1 546 aa13.41□□□□□ -0.26
GFM1-210ENST00000486715 ZMYND15Q9H091 742 aa13.41□□□□□ -0.26
GFM1-210ENST00000486715 BIVM-ERCC5R4GMW8 1640 aa13.4□□□□□ -0.26
GFM1-210ENST00000486715 SLKQ9H2G2 1235 aaPredicted RBP13.4□□□□□ -0.26
GFM1-210ENST00000486715 ABCA5Q8WWZ7 1642 aa13.4□□□□□ -0.26
GFM1-210ENST00000486715 GZF1Q9H116 711 aaPredicted RBP13.39□□□□□ -0.27
GFM1-210ENST00000486715 RCAN3Q9UKA8 241 aa13.39□□□□□ -0.27
GFM1-210ENST00000486715 PBRM1Q86U86 1689 aa13.39□□□□□ -0.27
GFM1-210ENST00000486715 RRP1P56182 461 aaKnown RBP13.38□□□□□ -0.27
GFM1-210ENST00000486715 SPRYD3Q8NCJ5 442 aa13.38□□□□□ -0.27
GFM1-210ENST00000486715 MAGI1Q96QZ7 1491 aaPredicted RBP13.38□□□□□ -0.27
GFM1-210ENST00000486715 CUX1P39880 1505 aa13.38□□□□□ -0.27
GFM1-210ENST00000486715 CNTLNQ9NXG0 1405 aa13.37□□□□□ -0.27
GFM1-210ENST00000486715 OSCARQ8IYS5 282 aa13.37□□□□□ -0.27
GFM1-210ENST00000486715 KIF7Q2M1P5 1343 aa13.35□□□□□ -0.27
GFM1-210ENST00000486715 ARHGEF11O15085 1522 aa13.35□□□□□ -0.27
GFM1-210ENST00000486715 CCDC7Q96M83 1385 aa13.35□□□□□ -0.27
GFM1-210ENST00000486715 ARHGAP35Q9NRY4 1499 aa13.35□□□□□ -0.27
GFM1-210ENST00000486715 HSP90AA2PQ14568 343 aaPredicted RBP13.35□□□□□ -0.27
GFM1-210ENST00000486715 CDCA7LQ96GN5 454 aa13.35□□□□□ -0.27
GFM1-210ENST00000486715 POGKQ9P215 609 aa13.34□□□□□ -0.27
GFM1-210ENST00000486715 CRBNQ96SW2 442 aa13.34□□□□□ -0.27
GFM1-210ENST00000486715 ABCA10Q8WWZ4 1543 aa13.33□□□□□ -0.28
GFM1-210ENST00000486715 PLEKHG5O94827 1062 aa13.33□□□□□ -0.28
GFM1-210ENST00000486715 ARID3AQ99856 593 aa13.33□□□□□ -0.28
GFM1-210ENST00000486715 FAM43AQ8N2R8 423 aa13.32□□□□□ -0.28
GFM1-210ENST00000486715 PNNQ9H307 717 aaKnown RBP13.32□□□□□ -0.28
GFM1-210ENST00000486715 SMG6Q86US8 1419 aaKnown RBP13.32□□□□□ -0.28
GFM1-210ENST00000486715 RRAGDQ9NQL2 400 aaPredicted RBP13.31□□□□□ -0.28
GFM1-210ENST00000486715 CCDC18Q5T9S5 1454 aa13.31□□□□□ -0.28
GFM1-210ENST00000486715 FGD5Q6ZNL6 1462 aa13.31□□□□□ -0.28
GFM1-210ENST00000486715 HSP90AA1P07900 732 aaKnown RBP13.31□□□□□ -0.28
GFM1-210ENST00000486715 NBPF8Q3BBV2 869 aa13.31□□□□□ -0.28
GFM1-210ENST00000486715 TOP2BQ02880 1626 aa13.3□□□□□ -0.28
GFM1-210ENST00000486715 FHAD1B1AJZ9 1412 aa13.3□□□□□ -0.28
GFM1-210ENST00000486715 MTUS2Q5JR59 1369 aa13.3□□□□□ -0.28
GFM1-210ENST00000486715 A0A0U1RQG5 324 aaPredicted RBP13.29□□□□□ -0.28
GFM1-210ENST00000486715 KDM2AQ9Y2K7 1162 aa13.29□□□□□ -0.28
GFM1-210ENST00000486715 GRIN2BQ13224 1484 aa13.28□□□□□ -0.28
GFM1-210ENST00000486715 SHROOM2Q13796 1616 aa13.27□□□□□ -0.28
GFM1-210ENST00000486715 KIF27Q86VH2 1401 aa13.27□□□□□ -0.28
GFM1-210ENST00000486715 LRRC9Q6ZRR7 1453 aa13.27□□□□□ -0.28
GFM1-210ENST00000486715 PODXL2Q9NZ53 605 aa13.27□□□□□ -0.29
GFM1-210ENST00000486715 SYNJ2O15056 1496 aa13.26□□□□□ -0.29
GFM1-210ENST00000486715 MS4A1P11836 297 aa13.26□□□□□ -0.29
GFM1-210ENST00000486715 C20orf194Q5TEA3 1177 aa13.25□□□□□ -0.29
GFM1-210ENST00000486715 MPHOSPH9Q99550 1183 aa13.25□□□□□ -0.29
GFM1-210ENST00000486715 PRXQ9BXM0 1461 aa13.25□□□□□ -0.29
GFM1-210ENST00000486715 PNISRQ8TF01 805 aaKnown RBP13.24□□□□□ -0.29
GFM1-210ENST00000486715 SLC4A1APQ9BWU0 796 aaKnown RBP13.24□□□□□ -0.29
GFM1-210ENST00000486715 AQRO60306 1485 aaKnown RBP eCLIP13.24□□□□□ -0.29
GFM1-210ENST00000486715 FHOD3Q2V2M9 1422 aa13.23□□□□□ -0.29
GFM1-210ENST00000486715 ADAMTS12P58397 1594 aa13.23□□□□□ -0.29
GFM1-210ENST00000486715 CC2D1BQ5T0F9 858 aaKnown RBP13.22□□□□□ -0.29
GFM1-210ENST00000486715 SNAPC4Q5SXM2 1469 aa13.22□□□□□ -0.29
GFM1-210ENST00000486715 ERICH3Q5RHP9 1530 aa13.22□□□□□ -0.29
GFM1-210ENST00000486715 RAD54L2Q9Y4B4 1467 aa13.21□□□□□ -0.29
GFM1-210ENST00000486715 UACAQ9BZF9 1416 aa13.21□□□□□ -0.29
GFM1-210ENST00000486715 PANK2Q9BZ23 570 aa13.21□□□□□ -0.3
GFM1-210ENST00000486715 FAM161AQ3B820 660 aa13.2□□□□□ -0.3
GFM1-210ENST00000486715 TIAM1Q13009 1591 aa13.19□□□□□ -0.3
GFM1-210ENST00000486715 RNF123Q5XPI4 1314 aa13.18□□□□□ -0.3
GFM1-210ENST00000486715 PTPRKQ15262 1439 aa13.18□□□□□ -0.3
GFM1-210ENST00000486715 GAPVD1Q14C86 1478 aa13.17□□□□□ -0.3
GFM1-210ENST00000486715 FMN1Q68DA7 1419 aa13.17□□□□□ -0.3
GFM1-210ENST00000486715 NUP160Q12769 1436 aa13.16□□□□□ -0.3
GFM1-210ENST00000486715 GOLGA6L3A6NEY3 463 aa13.16□□□□□ -0.3
GFM1-210ENST00000486715 L1TD1Q5T7N2 865 aaKnown RBP13.16□□□□□ -0.3
GFM1-210ENST00000486715 CARD11Q9BXL7 1154 aa13.16□□□□□ -0.3
GFM1-210ENST00000486715 CARMIL1Q5VZK9 1371 aa13.15□□□□□ -0.3
GFM1-210ENST00000486715 NCOA1Q15788 1441 aa13.15□□□□□ -0.3
GFM1-210ENST00000486715 ZBTB7CA1YPR0 619 aa13.14□□□□□ -0.31
GFM1-210ENST00000486715 CANXP27824 592 aaKnown RBP13.14□□□□□ -0.31
GFM1-210ENST00000486715 TRIM44Q96DX7 344 aaPredicted RBP13.14□□□□□ -0.31
GFM1-210ENST00000486715 FGD6Q6ZV73 1430 aa13.13□□□□□ -0.31
GFM1-210ENST00000486715 BECN1Q14457 450 aa13.13□□□□□ -0.31
GFM1-210ENST00000486715 RBM10P98175 930 aaKnown RBP13.12□□□□□ -0.31
GFM1-210ENST00000486715 ZNF777Q9ULD5 760 aaPredicted RBP13.11□□□□□ -0.31
GFM1-210ENST00000486715 GRIN2AQ12879 1464 aa13.11□□□□□ -0.31
GFM1-210ENST00000486715 XRCC6P12956 609 aaKnown RBP eCLIP13.11□□□□□ -0.31
GFM1-210ENST00000486715 C8orf34Q49A92 452 aa13.11□□□□□ -0.31
GFM1-210ENST00000486715 NAIPQ13075 1403 aa13.1□□□□□ -0.31
GFM1-210ENST00000486715 ST20-MTHFSA0A0A6YYL1 179 aa13.1□□□□□ -0.31
GFM1-210ENST00000486715 CEP170Q5SW79 1584 aa13.1□□□□□ -0.31
GFM1-210ENST00000486715 USP47Q96K76 1375 aa13.09□□□□□ -0.31
GFM1-210ENST00000486715 NCOA2Q15596 1464 aa13.08□□□□□ -0.32
GFM1-210ENST00000486715 SEC24BO95487 1268 aa13.08□□□□□ -0.32
GFM1-210ENST00000486715 CENPQQ7L2Z9 268 aaPredicted RBP13.08□□□□□ -0.32
GFM1-210ENST00000486715 RRP9O43818 475 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms