RNA–Protein interactions for RNA: ENST00000486339.6

PKD1-219, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,443 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-219ENST00000486339 WASHC2CQ9Y4E1 1318 aa17.95■□□□□ 0.46
PKD1-219ENST00000486339 CCDC136Q96JN2 1154 aa17.95■□□□□ 0.46
PKD1-219ENST00000486339 SENP3-EIF4A1A0A087X0R7 540 aa17.94■□□□□ 0.46
PKD1-219ENST00000486339 SAFB2Q14151 953 aaKnown RBP eCLIP17.94■□□□□ 0.46
PKD1-219ENST00000486339 CC2D1BQ5T0F9 858 aaKnown RBP17.92■□□□□ 0.46
PKD1-219ENST00000486339 ARAP1Q96P48 1450 aa17.92■□□□□ 0.46
PKD1-219ENST00000486339 CASKIN1Q8WXD9 1431 aa17.92■□□□□ 0.46
PKD1-219ENST00000486339 PEG3Q9GZU2 1588 aa17.92■□□□□ 0.46
PKD1-219ENST00000486339 LAMC3Q9Y6N6 1575 aa17.92■□□□□ 0.46
PKD1-219ENST00000486339 SRPK2P78362 688 aaKnown RBP17.91■□□□□ 0.46
PKD1-219ENST00000486339 UNC13AQ9UPW8 1703 aa17.91■□□□□ 0.46
PKD1-219ENST00000486339 TNNT2P45379 298 aaPredicted RBP17.91■□□□□ 0.46
PKD1-219ENST00000486339 STK26Q9P289 416 aa17.91■□□□□ 0.46
PKD1-219ENST00000486339 MYOM3Q5VTT5 1437 aa17.89■□□□□ 0.46
PKD1-219ENST00000486339 FGD6Q6ZV73 1430 aa17.89■□□□□ 0.46
PKD1-219ENST00000486339 ROCK2O75116 1388 aaKnown RBP17.89■□□□□ 0.45
PKD1-219ENST00000486339 DHX57Q6P158 1386 aaKnown RBP17.89■□□□□ 0.45
PKD1-219ENST00000486339 IRX6P78412 446 aaPredicted RBP17.89■□□□□ 0.45
PKD1-219ENST00000486339 LMOD2Q6P5Q4 547 aa17.89■□□□□ 0.45
PKD1-219ENST00000486339 ZNF644Q9H582 1327 aaPredicted RBP17.89■□□□□ 0.45
PKD1-219ENST00000486339 LRRC9Q6ZRR7 1453 aa17.89■□□□□ 0.45
PKD1-219ENST00000486339 PHLDB1Q86UU1 1377 aa17.88■□□□□ 0.45
PKD1-219ENST00000486339 HAP1P54257 671 aaPredicted RBP17.88■□□□□ 0.45
PKD1-219ENST00000486339 NUDCQ9Y266 331 aa17.88■□□□□ 0.45
PKD1-219ENST00000486339 PRG4Q92954 1404 aaPredicted RBP17.88■□□□□ 0.45
PKD1-219ENST00000486339 SNAPC4Q5SXM2 1469 aa17.87■□□□□ 0.45
PKD1-219ENST00000486339 ANP32AP39687 249 aaKnown RBP17.86■□□□□ 0.45
PKD1-219ENST00000486339 PRDM2Q13029 1718 aa17.85■□□□□ 0.45
PKD1-219ENST00000486339 NEUROD2Q15784 382 aa17.85■□□□□ 0.45
PKD1-219ENST00000486339 ABCA10Q8WWZ4 1543 aa17.84■□□□□ 0.45
PKD1-219ENST00000486339 A0A0G2JS52 829 aa17.84■□□□□ 0.45
PKD1-219ENST00000486339 NPM2Q86SE8 214 aaKnown RBP17.83■□□□□ 0.45
PKD1-219ENST00000486339 MAPK8IP3Q9UPT6 1336 aa17.83■□□□□ 0.44
PKD1-219ENST00000486339 FYCO1Q9BQS8 1478 aa17.82■□□□□ 0.44
PKD1-219ENST00000486339 CCDC144AA2RUR9 1427 aa17.81■□□□□ 0.44
PKD1-219ENST00000486339 NCOA2Q15596 1464 aa17.81■□□□□ 0.44
PKD1-219ENST00000486339 FAM69CQ0P6D2 419 aa17.81■□□□□ 0.44
PKD1-219ENST00000486339 EFCAB5A4FU69 1503 aa17.81■□□□□ 0.44
PKD1-219ENST00000486339 SYNJ2O15056 1496 aa17.8■□□□□ 0.44
PKD1-219ENST00000486339 U2SURPO15042 1029 aaKnown RBP17.8■□□□□ 0.44
PKD1-219ENST00000486339 MORC1Q86VD1 984 aa17.78■□□□□ 0.44
PKD1-219ENST00000486339 NUTM2DQ5VT03 806 aaPredicted RBP17.78■□□□□ 0.44
PKD1-219ENST00000486339 KIF15Q9NS87 1388 aa17.77■□□□□ 0.44
PKD1-219ENST00000486339 CCER2I3L3R5 266 aa17.76■□□□□ 0.43
PKD1-219ENST00000486339 UPF2Q9HAU5 1272 aaKnown RBP17.76■□□□□ 0.43
PKD1-219ENST00000486339 EIF3AQ14152 1382 aaKnown RBP17.75■□□□□ 0.43
PKD1-219ENST00000486339 HDGFL2Q7Z4V5 671 aaPredicted RBP17.74■□□□□ 0.43
PKD1-219ENST00000486339 SOX12O15370 315 aa17.74■□□□□ 0.43
PKD1-219ENST00000486339 SUPT16HQ9Y5B9 1047 aaKnown RBP17.74■□□□□ 0.43
PKD1-219ENST00000486339 KIAA0586Q9BVV6 1533 aa17.74■□□□□ 0.43
PKD1-219ENST00000486339 EID1Q9Y6B2 187 aa17.73■□□□□ 0.43
PKD1-219ENST00000486339 KTN1Q86UP2 1357 aaKnown RBP17.73■□□□□ 0.43
PKD1-219ENST00000486339 MYH16Q9H6N6 1097 aa17.73■□□□□ 0.43
PKD1-219ENST00000486339 AFAP1Q8N556 730 aa17.71■□□□□ 0.43
PKD1-219ENST00000486339 LAS1LQ9Y4W2 734 aaKnown RBP17.71■□□□□ 0.43
PKD1-219ENST00000486339 URB2Q14146 1524 aaKnown RBP17.71■□□□□ 0.43
PKD1-219ENST00000486339 ANKRD50Q9ULJ7 1429 aa17.7■□□□□ 0.42
PKD1-219ENST00000486339 PNNQ9H307 717 aaKnown RBP17.69■□□□□ 0.42
PKD1-219ENST00000486339 TRAK1Q9UPV9 953 aa17.69■□□□□ 0.42
PKD1-219ENST00000486339 ST20-MTHFSA0A0A6YYL1 179 aa17.68■□□□□ 0.42
PKD1-219ENST00000486339 TROQ12816 1431 aaPredicted RBP17.68■□□□□ 0.42
PKD1-219ENST00000486339 UACAQ9BZF9 1416 aa17.68■□□□□ 0.42
PKD1-219ENST00000486339 VGFO15240 615 aaPredicted RBP17.67■□□□□ 0.42
PKD1-219ENST00000486339 ARHGAP5Q13017 1502 aa17.66■□□□□ 0.42
PKD1-219ENST00000486339 RALBP1Q15311 655 aa17.66■□□□□ 0.42
PKD1-219ENST00000486339 RRBP1Q9P2E9 1410 aaKnown RBP17.65■□□□□ 0.42
PKD1-219ENST00000486339 HSP90AA1P07900 732 aaKnown RBP17.65■□□□□ 0.42
PKD1-219ENST00000486339 FTSJ3Q8IY81 847 aaKnown RBP17.64■□□□□ 0.41
PKD1-219ENST00000486339 TERF2IPQ9NYB0 399 aa17.63■□□□□ 0.41
PKD1-219ENST00000486339 EHBP1L1Q8N3D4 1523 aa17.63■□□□□ 0.41
PKD1-219ENST00000486339 IQGAP2Q13576 1575 aa17.62■□□□□ 0.41
PKD1-219ENST00000486339 MAGI1Q96QZ7 1491 aaPredicted RBP17.61■□□□□ 0.41
PKD1-219ENST00000486339 MIA2Q96PC5 1412 aa17.61■□□□□ 0.41
PKD1-219ENST00000486339 PAK3O75914 559 aaPredicted RBP17.61■□□□□ 0.41
PKD1-219ENST00000486339 FRAT1Q92837 279 aaPredicted RBP17.61■□□□□ 0.41
PKD1-219ENST00000486339 ZNF608Q9ULD9 1512 aaPredicted RBP17.6■□□□□ 0.41
PKD1-219ENST00000486339 TIAM1Q13009 1591 aa17.6■□□□□ 0.41
PKD1-219ENST00000486339 CUL7Q14999 1698 aa17.6■□□□□ 0.41
PKD1-219ENST00000486339 GRIN2AQ12879 1464 aa17.6■□□□□ 0.41
PKD1-219ENST00000486339 HECW1Q76N89 1606 aa17.6■□□□□ 0.41
PKD1-219ENST00000486339 U2AF1L5P0DN76 240 aaPredicted RBP17.58■□□□□ 0.41
PKD1-219ENST00000486339 U2AF1Q01081 240 aaKnown RBP eCLIP17.58■□□□□ 0.41
PKD1-219ENST00000486339 USP47Q96K76 1375 aa17.58■□□□□ 0.4
PKD1-219ENST00000486339 ARXQ96QS3 562 aa17.56■□□□□ 0.4
PKD1-219ENST00000486339 NLRP13Q86W25 1043 aa17.56■□□□□ 0.4
PKD1-219ENST00000486339 EPRSP07814 1512 aaKnown RBP17.56■□□□□ 0.4
PKD1-219ENST00000486339 NUTM2FA1L443 756 aa17.55■□□□□ 0.4
PKD1-219ENST00000486339 BIVM-ERCC5R4GMW8 1640 aa17.55■□□□□ 0.4
PKD1-219ENST00000486339 NGDNQ8NEJ9 315 aaKnown RBP17.54■□□□□ 0.4
PKD1-219ENST00000486339 CDK13Q14004 1512 aaKnown RBP17.54■□□□□ 0.4
PKD1-219ENST00000486339 C9orf84Q5VXU9 1444 aa17.54■□□□□ 0.4
PKD1-219ENST00000486339 PLEKHH2Q8IVE3 1493 aa17.53■□□□□ 0.4
PKD1-219ENST00000486339 STAC3Q96MF2 364 aa17.53■□□□□ 0.4
PKD1-219ENST00000486339 PANK3Q9H999 370 aa17.52■□□□□ 0.39
PKD1-219ENST00000486339 MS4A1P11836 297 aa17.51■□□□□ 0.39
PKD1-219ENST00000486339 PPP4R2Q9NY27 417 aa17.51■□□□□ 0.39
PKD1-219ENST00000486339 SCAPERQ9BY12 1400 aa17.51■□□□□ 0.39
PKD1-219ENST00000486339 PLB1Q6P1J6 1458 aa17.5■□□□□ 0.39
PKD1-219ENST00000486339 RTF1Q92541 710 aaKnown RBP17.5■□□□□ 0.39
PKD1-219ENST00000486339 EVC2Q86UK5 1308 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms