RNA–Protein interactions for RNA: ENST00000486339.6

PKD1-219, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,443 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-219ENST00000486339 NISCHQ9Y2I1 1504 aa25.05■■□□□ 1.6
PKD1-219ENST00000486339 DCAF8L2P0C7V8 631 aa24.49■■□□□ 1.51
PKD1-219ENST00000486339 SUPT5HO00267 1087 aaKnown RBP23.07■■□□□ 1.28
PKD1-219ENST00000486339 SHROOM4Q9ULL8 1493 aa23.06■■□□□ 1.28
PKD1-219ENST00000486339 EHMT2Q96KQ7 1210 aa21.91■■□□□ 1.1
PKD1-219ENST00000486339 FAM9AQ8IZU1 332 aaPredicted RBP21.64■■□□□ 1.05
PKD1-219ENST00000486339 ABCC9O60706 1549 aa21.51■■□□□ 1.03
PKD1-219ENST00000486339 TRIM41Q8WV44 630 aa21.47■■□□□ 1.03
PKD1-219ENST00000486339 APLP2Q06481 763 aa21.4■■□□□ 1.02
PKD1-219ENST00000486339 RANGAP1P46060 587 aaPredicted RBP21.13■□□□□ 0.97
PKD1-219ENST00000486339 PABPN1Q86U42 306 aaKnown RBP eCLIP21.09■□□□□ 0.97
PKD1-219ENST00000486339 TTBK1Q5TCY1 1321 aaPredicted RBP21.08■□□□□ 0.97
PKD1-219ENST00000486339 UBTFP17480 764 aaKnown RBP21.05■□□□□ 0.96
PKD1-219ENST00000486339 PCGF6Q9BYE7 350 aa20.94■□□□□ 0.94
PKD1-219ENST00000486339 ATP1B4Q9UN42 357 aaPredicted RBP20.87■□□□□ 0.93
PKD1-219ENST00000486339 CHIC1Q5VXU3 224 aa20.85■□□□□ 0.93
PKD1-219ENST00000486339 CCDC180Q9P1Z9 1646 aa20.83■□□□□ 0.92
PKD1-219ENST00000486339 ZCCHC6Q5VYS8 1495 aaKnown RBP20.78■□□□□ 0.92
PKD1-219ENST00000486339 LOC105371045A0A1W2PR82 267 aa20.59■□□□□ 0.89
PKD1-219ENST00000486339 PPARGC1BQ86YN6 1023 aaKnown RBP20.53■□□□□ 0.88
PKD1-219ENST00000486339 SCRIBQ14160 1630 aa20.53■□□□□ 0.88
PKD1-219ENST00000486339 CCER1Q8TC90 406 aaPredicted RBP20.51■□□□□ 0.87
PKD1-219ENST00000486339 ZEB1P37275 1124 aaPredicted RBP20.4■□□□□ 0.86
PKD1-219ENST00000486339 TRIM26Q12899 539 aaPredicted RBP20.31■□□□□ 0.84
PKD1-219ENST00000486339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.3■□□□□ 0.84
PKD1-219ENST00000486339 HNRNPUL2Q1KMD3 747 aaKnown RBP20.3■□□□□ 0.84
PKD1-219ENST00000486339 RB1CC1Q8TDY2 1594 aa20.26■□□□□ 0.83
PKD1-219ENST00000486339 ITGAEP38570 1179 aa20.18■□□□□ 0.82
PKD1-219ENST00000486339 NACADO15069 1562 aa20.15■□□□□ 0.82
PKD1-219ENST00000486339 MYT1LQ9UL68 1186 aa20.01■□□□□ 0.79
PKD1-219ENST00000486339 CSRNP3Q8WYN3 585 aa20■□□□□ 0.79
PKD1-219ENST00000486339 FBLN2P98095 1184 aa19.97■□□□□ 0.79
PKD1-219ENST00000486339 DCAF1Q9Y4B6 1507 aa19.97■□□□□ 0.79
PKD1-219ENST00000486339 PELP1Q8IZL8 1130 aaKnown RBP19.95■□□□□ 0.78
PKD1-219ENST00000486339 RSF1Q96T23 1441 aaPredicted RBP19.9■□□□□ 0.78
PKD1-219ENST00000486339 CENPBP07199 599 aaPredicted RBP19.82■□□□□ 0.76
PKD1-219ENST00000486339 HRCP23327 699 aa19.82■□□□□ 0.76
PKD1-219ENST00000486339 FAM50AQ14320 339 aaKnown RBP19.82■□□□□ 0.76
PKD1-219ENST00000486339 P3H3Q8IVL6 736 aa19.76■□□□□ 0.75
PKD1-219ENST00000486339 BAZ1BQ9UIG0 1483 aaKnown RBP19.67■□□□□ 0.74
PKD1-219ENST00000486339 CECR2Q9BXF3 1484 aa19.66■□□□□ 0.74
PKD1-219ENST00000486339 BAZ1AQ9NRL2 1556 aaPredicted RBP19.64■□□□□ 0.73
PKD1-219ENST00000486339 ARID3CA6NKF2 412 aa19.6■□□□□ 0.73
PKD1-219ENST00000486339 YTHDC1Q96MU7 727 aaKnown RBP19.59■□□□□ 0.73
PKD1-219ENST00000486339 TRIM52Q96A61 297 aa19.58■□□□□ 0.72
PKD1-219ENST00000486339 POLR3GLQ9BT43 218 aa19.57■□□□□ 0.72
PKD1-219ENST00000486339 MYO15BQ96JP2 1530 aa19.5■□□□□ 0.71
PKD1-219ENST00000486339 CDK11AQ9UQ88 783 aaPredicted RBP19.48■□□□□ 0.71
PKD1-219ENST00000486339 WRNQ14191 1432 aaPredicted RBP eCLIP19.47■□□□□ 0.71
PKD1-219ENST00000486339 NEUROD1Q13562 356 aa19.42■□□□□ 0.7
PKD1-219ENST00000486339 NEFLP07196 543 aa19.41■□□□□ 0.7
PKD1-219ENST00000486339 MROH2BQ7Z745 1585 aa19.4■□□□□ 0.7
PKD1-219ENST00000486339 EEA1Q15075 1411 aa19.38■□□□□ 0.69
PKD1-219ENST00000486339 CHMP7Q8WUX9 453 aaPredicted RBP19.37■□□□□ 0.69
PKD1-219ENST00000486339 ZNF777Q9ULD5 760 aaPredicted RBP19.37■□□□□ 0.69
PKD1-219ENST00000486339 CNGB1Q14028 1251 aaPredicted RBP19.35■□□□□ 0.69
PKD1-219ENST00000486339 CLIP1P30622 1438 aa19.29■□□□□ 0.68
PKD1-219ENST00000486339 KIF27Q86VH2 1401 aa19.27■□□□□ 0.68
PKD1-219ENST00000486339 DIEXFQ68CQ4 756 aaKnown RBP19.24■□□□□ 0.67
PKD1-219ENST00000486339 ZNF326Q5BKZ1 582 aaKnown RBP19.24■□□□□ 0.67
PKD1-219ENST00000486339 GOLGA3Q08378 1498 aa19.24■□□□□ 0.67
PKD1-219ENST00000486339 NPM1P06748 294 aaKnown RBP eCLIP19.23■□□□□ 0.67
PKD1-219ENST00000486339 SMARCA2P51531 1590 aa19.23■□□□□ 0.67
PKD1-219ENST00000486339 SLC4A1APQ9BWU0 796 aaKnown RBP19.21■□□□□ 0.67
PKD1-219ENST00000486339 CCDC88BA6NC98 1476 aa19.2■□□□□ 0.66
PKD1-219ENST00000486339 ERCC6Q03468 1493 aa19.19■□□□□ 0.66
PKD1-219ENST00000486339 MTUS2Q5JR59 1369 aa19.16■□□□□ 0.66
PKD1-219ENST00000486339 CEP162Q5TB80 1403 aa19.16■□□□□ 0.66
PKD1-219ENST00000486339 CEP164Q9UPV0 1460 aa19.13■□□□□ 0.65
PKD1-219ENST00000486339 TNIKQ9UKE5 1360 aa19.1■□□□□ 0.65
PKD1-219ENST00000486339 WIZO95785 1651 aa19.07■□□□□ 0.64
PKD1-219ENST00000486339 MYT1Q01538 1121 aa19.06■□□□□ 0.64
PKD1-219ENST00000486339 CHIC2Q9UKJ5 165 aa19.06■□□□□ 0.64
PKD1-219ENST00000486339 TOP2AP11388 1531 aaKnown RBP19.05■□□□□ 0.64
PKD1-219ENST00000486339 CUX2O14529 1486 aa19.04■□□□□ 0.64
PKD1-219ENST00000486339 ATAD2BQ9ULI0 1458 aa19.04■□□□□ 0.64
PKD1-219ENST00000486339 SOGA1O94964 1423 aa19.04■□□□□ 0.64
PKD1-219ENST00000486339 ZNF316A6NFI3 1004 aaPredicted RBP19.02■□□□□ 0.64
PKD1-219ENST00000486339 TSPY4P0CV99 314 aa19.01■□□□□ 0.63
PKD1-219ENST00000486339 TSPY10P0CW01 314 aa19.01■□□□□ 0.63
PKD1-219ENST00000486339 PDS5BQ9NTI5 1447 aa19.01■□□□□ 0.63
PKD1-219ENST00000486339 ERICH6Q7L0X2 663 aa18.99■□□□□ 0.63
PKD1-219ENST00000486339 CARMIL1Q5VZK9 1371 aa18.99■□□□□ 0.63
PKD1-219ENST00000486339 ABCC8Q09428 1581 aa18.98■□□□□ 0.63
PKD1-219ENST00000486339 SMARCA4P51532 1647 aa18.97■□□□□ 0.63
PKD1-219ENST00000486339 PLEKHD1A6NEE1 506 aa18.97■□□□□ 0.63
PKD1-219ENST00000486339 CADPSQ9ULU8 1353 aa18.96■□□□□ 0.63
PKD1-219ENST00000486339 ANP32CO43423 234 aa18.95■□□□□ 0.62
PKD1-219ENST00000486339 TONSLQ96HA7 1378 aa18.95■□□□□ 0.62
PKD1-219ENST00000486339 ESF1Q9H501 851 aaKnown RBP18.94■□□□□ 0.62
PKD1-219ENST00000486339 KCNH8Q96L42 1107 aa18.92■□□□□ 0.62
PKD1-219ENST00000486339 BCANQ96GW7 911 aa18.9■□□□□ 0.62
PKD1-219ENST00000486339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.89■□□□□ 0.62
PKD1-219ENST00000486339 CHGAP10645 457 aaKnown RBP18.87■□□□□ 0.61
PKD1-219ENST00000486339 TDRD9Q8NDG6 1382 aaKnown RBP18.85■□□□□ 0.61
PKD1-219ENST00000486339 RRP7BPQ9NSQ0 103 aa18.84■□□□□ 0.61
PKD1-219ENST00000486339 CFDP1Q9UEE9 299 aaPredicted RBP18.81■□□□□ 0.6
PKD1-219ENST00000486339 STAG3Q9UJ98 1225 aa18.8■□□□□ 0.6
PKD1-219ENST00000486339 FHAD1B1AJZ9 1412 aa18.79■□□□□ 0.6
PKD1-219ENST00000486339 EIF4G1Q04637 1599 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms