RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 MIA2Q96PC5 1412 aa17.38■□□□□ 0.37
SND1-212ENST00000485871 TCOF1Q13428 1488 aaKnown RBP17.38■□□□□ 0.37
SND1-212ENST00000485871 TSPOAP1O95153 1857 aa17.38■□□□□ 0.37
SND1-212ENST00000485871 CCNB3Q8WWL7 1395 aa17.37■□□□□ 0.37
SND1-212ENST00000485871 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.36■□□□□ 0.37
SND1-212ENST00000485871 GLI2P10070 1586 aa17.35■□□□□ 0.37
SND1-212ENST00000485871 ARAP3Q8WWN8 1544 aa17.34■□□□□ 0.37
SND1-212ENST00000485871 MAP3K4Q9Y6R4 1608 aa17.32■□□□□ 0.36
SND1-212ENST00000485871 KCNH8Q96L42 1107 aa17.32■□□□□ 0.36
SND1-212ENST00000485871 SAMD9LQ8IVG5 1584 aa17.32■□□□□ 0.36
SND1-212ENST00000485871 PLCH2O75038 1416 aa17.31■□□□□ 0.36
SND1-212ENST00000485871 ADGRL1O94910 1474 aa17.31■□□□□ 0.36
SND1-212ENST00000485871 CAMSAP2Q08AD1 1489 aa17.3■□□□□ 0.36
SND1-212ENST00000485871 PCGF6Q9BYE7 350 aa17.28■□□□□ 0.36
SND1-212ENST00000485871 DNMT1P26358 1616 aaKnown RBP17.27■□□□□ 0.36
SND1-212ENST00000485871 ARHGAP5Q13017 1502 aa17.26■□□□□ 0.35
SND1-212ENST00000485871 CROCC2H7BZ55 1655 aa17.26■□□□□ 0.35
SND1-212ENST00000485871 CFDP1Q9UEE9 299 aaPredicted RBP17.25■□□□□ 0.35
SND1-212ENST00000485871 PPRC1Q5VV67 1664 aaKnown RBP17.25■□□□□ 0.35
SND1-212ENST00000485871 ZNF644Q9H582 1327 aaPredicted RBP17.24■□□□□ 0.35
SND1-212ENST00000485871 ARHGEF5Q12774 1597 aa17.23■□□□□ 0.35
SND1-212ENST00000485871 ABCC1P33527 1531 aa17.23■□□□□ 0.35
SND1-212ENST00000485871 HECW2Q9P2P5 1572 aa17.22■□□□□ 0.35
SND1-212ENST00000485871 PTPRKQ15262 1439 aa17.21■□□□□ 0.35
SND1-212ENST00000485871 CD109Q6YHK3 1445 aa17.21■□□□□ 0.35
SND1-212ENST00000485871 CFAP74Q9C0B2 1584 aa17.21■□□□□ 0.35
SND1-212ENST00000485871 MBD5Q9P267 1494 aa17.21■□□□□ 0.35
SND1-212ENST00000485871 FAM50AQ14320 339 aaKnown RBP17.21■□□□□ 0.35
SND1-212ENST00000485871 FANCAO15360 1455 aa17.2■□□□□ 0.34
SND1-212ENST00000485871 SYCP2Q9BX26 1530 aa17.2■□□□□ 0.34
SND1-212ENST00000485871 ARHGEF12Q9NZN5 1544 aa17.19■□□□□ 0.34
SND1-212ENST00000485871 ABCC5O15440 1437 aa17.19■□□□□ 0.34
SND1-212ENST00000485871 DAPK1P53355 1430 aa17.19■□□□□ 0.34
SND1-212ENST00000485871 KIAA1107Q9UPP5 1409 aa17.19■□□□□ 0.34
SND1-212ENST00000485871 PLEKHH2Q8IVE3 1493 aa17.18■□□□□ 0.34
SND1-212ENST00000485871 ADGBQ8N7X0 1667 aa17.16■□□□□ 0.34
SND1-212ENST00000485871 EFCAB2Q5VUJ9 269 aa17.16■□□□□ 0.34
SND1-212ENST00000485871 FBXO41Q8TF61 875 aa17.15■□□□□ 0.34
SND1-212ENST00000485871 ZNF777Q9ULD5 760 aaPredicted RBP17.15■□□□□ 0.34
SND1-212ENST00000485871 NEO1Q92859 1461 aa17.15■□□□□ 0.34
SND1-212ENST00000485871 SHANK2Q9UPX8 1470 aa17.15■□□□□ 0.34
SND1-212ENST00000485871 MAST1Q9Y2H9 1570 aa17.15■□□□□ 0.34
SND1-212ENST00000485871 CCDC141Q6ZP82 1450 aa17.14■□□□□ 0.33
SND1-212ENST00000485871 COL17A1Q9UMD9 1497 aaPredicted RBP17.14■□□□□ 0.33
SND1-212ENST00000485871 GCC2Q8IWJ2 1684 aa17.13■□□□□ 0.33
SND1-212ENST00000485871 AKNAQ7Z591 1439 aa17.13■□□□□ 0.33
SND1-212ENST00000485871 ADGRL2O95490 1459 aa17.12■□□□□ 0.33
SND1-212ENST00000485871 TRAPPC8Q9Y2L5 1435 aa17.11■□□□□ 0.33
SND1-212ENST00000485871 TEX14Q8IWB6 1497 aa17.11■□□□□ 0.33
SND1-212ENST00000485871 ITGAEP38570 1179 aa17.1■□□□□ 0.33
SND1-212ENST00000485871 HNRNPMP52272 730 aaKnown RBP eCLIP17.1■□□□□ 0.33
SND1-212ENST00000485871 RICTORQ6R327 1708 aa17.09■□□□□ 0.33
SND1-212ENST00000485871 ROCK1Q13464 1354 aa17.08■□□□□ 0.32
SND1-212ENST00000485871 RSPH4AQ5TD94 716 aa17.08■□□□□ 0.32
SND1-212ENST00000485871 KDM5CP41229 1560 aa17.07■□□□□ 0.32
SND1-212ENST00000485871 INO80Q9ULG1 1556 aaPredicted RBP17.07■□□□□ 0.32
SND1-212ENST00000485871 HFM1A2PYH4 1435 aa17.07■□□□□ 0.32
SND1-212ENST00000485871 C9orf84Q5VXU9 1444 aa17.07■□□□□ 0.32
SND1-212ENST00000485871 SCAPERQ9BY12 1400 aa17.07■□□□□ 0.32
SND1-212ENST00000485871 PLXNC1O60486 1568 aa17.06■□□□□ 0.32
SND1-212ENST00000485871 FRMPD1Q5SYB0 1578 aa17.06■□□□□ 0.32
SND1-212ENST00000485871 NAIPQ13075 1403 aa17.05■□□□□ 0.32
SND1-212ENST00000485871 ZFYVE16Q7Z3T8 1539 aa17.05■□□□□ 0.32
SND1-212ENST00000485871 NCOA1Q15788 1441 aa17.04■□□□□ 0.32
SND1-212ENST00000485871 POGZQ7Z3K3 1410 aa17.04■□□□□ 0.32
SND1-212ENST00000485871 KIDINS220Q9ULH0 1771 aa17.04■□□□□ 0.32
SND1-212ENST00000485871 ZNF518AQ6AHZ1 1483 aa17.03■□□□□ 0.32
SND1-212ENST00000485871 SETD5Q9C0A6 1442 aa17.03■□□□□ 0.32
SND1-212ENST00000485871 DENND4BO75064 1496 aaPredicted RBP17.01■□□□□ 0.31
SND1-212ENST00000485871 CHIC2Q9UKJ5 165 aa17.01■□□□□ 0.31
SND1-212ENST00000485871 RTEL1-TNFRSF6BF6WH68 1400 aa17.01■□□□□ 0.31
SND1-212ENST00000485871 ATP7AQ04656 1500 aa17.01■□□□□ 0.31
SND1-212ENST00000485871 ZMYM4Q5VZL5 1548 aa17■□□□□ 0.31
SND1-212ENST00000485871 RAB3GAP2Q9H2M9 1393 aa17■□□□□ 0.31
SND1-212ENST00000485871 AFAP1Q8N556 730 aa16.99■□□□□ 0.31
SND1-212ENST00000485871 ANKRD30AQ9BXX3 1397 aa16.99■□□□□ 0.31
SND1-212ENST00000485871 TSPY4P0CV99 314 aa16.98■□□□□ 0.31
SND1-212ENST00000485871 TSPY10P0CW01 314 aa16.98■□□□□ 0.31
SND1-212ENST00000485871 MLH3Q9UHC1 1453 aa16.98■□□□□ 0.31
SND1-212ENST00000485871 RRP7BPQ9NSQ0 103 aa16.97■□□□□ 0.31
SND1-212ENST00000485871 HRCP23327 699 aa16.96■□□□□ 0.31
SND1-212ENST00000485871 ABCA6Q8N139 1617 aa16.96■□□□□ 0.3
SND1-212ENST00000485871 KIF15Q9NS87 1388 aa16.94■□□□□ 0.3
SND1-212ENST00000485871 DUOX2Q9NRD8 1548 aa16.94■□□□□ 0.3
SND1-212ENST00000485871 SPAG9O60271 1321 aaKnown RBP16.94■□□□□ 0.3
SND1-212ENST00000485871 DIP2CQ9Y2E4 1556 aa16.93■□□□□ 0.3
SND1-212ENST00000485871 ANKRD50Q9ULJ7 1429 aa16.92■□□□□ 0.3
SND1-212ENST00000485871 RAPGEF3O95398 923 aa16.91■□□□□ 0.3
SND1-212ENST00000485871 BCORL1Q5H9F3 1711 aa16.9■□□□□ 0.3
SND1-212ENST00000485871 EIF2AK4Q9P2K8 1649 aaKnown RBP16.89■□□□□ 0.29
SND1-212ENST00000485871 ERBINQ96RT1 1412 aa16.89■□□□□ 0.29
SND1-212ENST00000485871 UNC13BO14795 1591 aa16.89■□□□□ 0.29
SND1-212ENST00000485871 MAGI2Q86UL8 1455 aa16.88■□□□□ 0.29
SND1-212ENST00000485871 DEPDC5O75140 1603 aa16.87■□□□□ 0.29
SND1-212ENST00000485871 YEATS2Q9ULM3 1422 aa16.87■□□□□ 0.29
SND1-212ENST00000485871 KDM5DQ9BY66 1539 aa16.86■□□□□ 0.29
SND1-212ENST00000485871 DHX57Q6P158 1386 aaKnown RBP16.86■□□□□ 0.29
SND1-212ENST00000485871 ARHGEF40Q8TER5 1519 aa16.86■□□□□ 0.29
SND1-212ENST00000485871 REREQ9P2R6 1566 aa16.85■□□□□ 0.29
SND1-212ENST00000485871 A2MP01023 1474 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms