RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 DIP2BQ9P265 1576 aa10.14□□□□□ -0.79
CSDE1-207ENST00000483407 ECM2O94769 699 aaPredicted RBP10.13□□□□□ -0.79
CSDE1-207ENST00000483407 SPDYE1Q8NFV5 336 aaPredicted RBP10.12□□□□□ -0.79
CSDE1-207ENST00000483407 ZBTB47Q9UFB7 747 aaPredicted RBP10.11□□□□□ -0.79
CSDE1-207ENST00000483407 ABCC2Q92887 1545 aa10.1□□□□□ -0.79
CSDE1-207ENST00000483407 KDM6BO15054 1643 aa10.09□□□□□ -0.79
CSDE1-207ENST00000483407 PLEKHG5O94827 1062 aa10.09□□□□□ -0.79
CSDE1-207ENST00000483407 PLB1Q6P1J6 1458 aa10.09□□□□□ -0.79
CSDE1-207ENST00000483407 IQGAP2Q13576 1575 aa10.09□□□□□ -0.79
CSDE1-207ENST00000483407 ASXL2Q76L83 1435 aa10.07□□□□□ -0.8
CSDE1-207ENST00000483407 UACAQ9BZF9 1416 aa10.07□□□□□ -0.8
CSDE1-207ENST00000483407 UHRF1BP1LA0JNW5 1464 aa10.07□□□□□ -0.8
CSDE1-207ENST00000483407 CLCN6P51797 869 aa10.07□□□□□ -0.8
CSDE1-207ENST00000483407 RAPGEF2Q9Y4G8 1499 aa10.06□□□□□ -0.8
CSDE1-207ENST00000483407 KDM4FA0A1W2PPD8 638 aa10.05□□□□□ -0.8
CSDE1-207ENST00000483407 DISP1Q96F81 1524 aa10.04□□□□□ -0.8
CSDE1-207ENST00000483407 CLEC11AQ9Y240 323 aa10.04□□□□□ -0.8
CSDE1-207ENST00000483407 RGL2O15211 777 aa10.03□□□□□ -0.8
CSDE1-207ENST00000483407 GLI2P10070 1586 aa10.03□□□□□ -0.8
CSDE1-207ENST00000483407 HAP1P54257 671 aaPredicted RBP10.03□□□□□ -0.8
CSDE1-207ENST00000483407 BBXQ8WY36 941 aaPredicted RBP10.03□□□□□ -0.8
CSDE1-207ENST00000483407 UGGT2Q9NYU1 1516 aa10.02□□□□□ -0.8
CSDE1-207ENST00000483407 TSPOAP1O95153 1857 aa10.02□□□□□ -0.8
CSDE1-207ENST00000483407 KDM5BQ9UGL1 1544 aa10.02□□□□□ -0.81
CSDE1-207ENST00000483407 TEX14Q8IWB6 1497 aa10□□□□□ -0.81
CSDE1-207ENST00000483407 EPRSP07814 1512 aaKnown RBP10□□□□□ -0.81
CSDE1-207ENST00000483407 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.99□□□□□ -0.81
CSDE1-207ENST00000483407 CIZ1Q9ULV3 898 aaPredicted RBP9.99□□□□□ -0.81
CSDE1-207ENST00000483407 KIAA0556O60303 1618 aa9.99□□□□□ -0.81
CSDE1-207ENST00000483407 POTEIP0CG38 1075 aa9.98□□□□□ -0.81
CSDE1-207ENST00000483407 FAM9AQ8IZU1 332 aaPredicted RBP9.98□□□□□ -0.81
CSDE1-207ENST00000483407 GOLGA3Q08378 1498 aa9.98□□□□□ -0.81
CSDE1-207ENST00000483407 WDR7Q9Y4E6 1490 aa9.97□□□□□ -0.81
CSDE1-207ENST00000483407 VSIG10Q8N0Z9 540 aa9.95□□□□□ -0.82
CSDE1-207ENST00000483407 COL17A1Q9UMD9 1497 aaPredicted RBP9.95□□□□□ -0.82
CSDE1-207ENST00000483407 ZCCHC11Q5TAX3 1644 aaKnown RBP9.95□□□□□ -0.82
CSDE1-207ENST00000483407 PPRC1Q5VV67 1664 aaKnown RBP9.95□□□□□ -0.82
CSDE1-207ENST00000483407 MAP3K4Q9Y6R4 1608 aa9.94□□□□□ -0.82
CSDE1-207ENST00000483407 ADGRL1O94910 1474 aa9.94□□□□□ -0.82
CSDE1-207ENST00000483407 KCNH8Q96L42 1107 aa9.94□□□□□ -0.82
CSDE1-207ENST00000483407 CD109Q6YHK3 1445 aa9.93□□□□□ -0.82
CSDE1-207ENST00000483407 PRXQ9BXM0 1461 aa9.92□□□□□ -0.82
CSDE1-207ENST00000483407 NUBP1P53384 320 aa9.92□□□□□ -0.82
CSDE1-207ENST00000483407 GSE1Q14687 1217 aa9.91□□□□□ -0.82
CSDE1-207ENST00000483407 MAGI3Q5TCQ9 1506 aa9.91□□□□□ -0.82
CSDE1-207ENST00000483407 ABCA8O94911 1581 aa9.9□□□□□ -0.82
CSDE1-207ENST00000483407 PAXIP1Q6ZW49 1069 aaPredicted RBP9.9□□□□□ -0.82
CSDE1-207ENST00000483407 PCDH10Q9P2E7 1040 aa9.9□□□□□ -0.82
CSDE1-207ENST00000483407 CTTNBP2Q8WZ74 1663 aa9.89□□□□□ -0.83
CSDE1-207ENST00000483407 PRR29P0C7W0 189 aa9.88□□□□□ -0.83
CSDE1-207ENST00000483407 P3H3Q8IVL6 736 aa9.88□□□□□ -0.83
CSDE1-207ENST00000483407 CREBZFQ9NS37 354 aa9.88□□□□□ -0.83
CSDE1-207ENST00000483407 ARID3CA6NKF2 412 aa9.87□□□□□ -0.83
CSDE1-207ENST00000483407 CHGAP10645 457 aaKnown RBP9.87□□□□□ -0.83
CSDE1-207ENST00000483407 MNX1P50219 401 aaPredicted RBP9.87□□□□□ -0.83
CSDE1-207ENST00000483407 CHADLQ6NUI6 762 aa9.87□□□□□ -0.83
CSDE1-207ENST00000483407 CFAP44Q96MT7 982 aa9.87□□□□□ -0.83
CSDE1-207ENST00000483407 DCBLD2Q96PD2 775 aa9.87□□□□□ -0.83
CSDE1-207ENST00000483407 SPRYD3Q8NCJ5 442 aa9.86□□□□□ -0.83
CSDE1-207ENST00000483407 CFAP43Q8NDM7 1665 aa9.86□□□□□ -0.83
CSDE1-207ENST00000483407 CD44P16070 742 aaKnown RBP9.85□□□□□ -0.83
CSDE1-207ENST00000483407 PHLDB1Q86UU1 1377 aa9.85□□□□□ -0.83
CSDE1-207ENST00000483407 ATP10BO94823 1461 aa9.85□□□□□ -0.83
CSDE1-207ENST00000483407 RNF25Q96BH1 459 aaPredicted RBP9.84□□□□□ -0.83
CSDE1-207ENST00000483407 ARAP3Q8WWN8 1544 aa9.82□□□□□ -0.84
CSDE1-207ENST00000483407 POTEMA6NI47 508 aa9.82□□□□□ -0.84
CSDE1-207ENST00000483407 DCAF8Q5TAQ9 597 aa9.82□□□□□ -0.84
CSDE1-207ENST00000483407 HS6ST3Q8IZP7 471 aa9.82□□□□□ -0.84
CSDE1-207ENST00000483407 KDM2AQ9Y2K7 1162 aa9.82□□□□□ -0.84
CSDE1-207ENST00000483407 HECW2Q9P2P5 1572 aa9.81□□□□□ -0.84
CSDE1-207ENST00000483407 BCANQ96GW7 911 aa9.81□□□□□ -0.84
CSDE1-207ENST00000483407 EEA1Q15075 1411 aa9.81□□□□□ -0.84
CSDE1-207ENST00000483407 RANGAP1P46060 587 aaPredicted RBP9.8□□□□□ -0.84
CSDE1-207ENST00000483407 RAPGEF3O95398 923 aa9.79□□□□□ -0.84
CSDE1-207ENST00000483407 FBXO41Q8TF61 875 aa9.79□□□□□ -0.84
CSDE1-207ENST00000483407 FAM212AQ96EL1 285 aa9.79□□□□□ -0.84
CSDE1-207ENST00000483407 NEO1Q92859 1461 aa9.79□□□□□ -0.84
CSDE1-207ENST00000483407 PLEKHD1A6NEE1 506 aa9.78□□□□□ -0.84
CSDE1-207ENST00000483407 OTUD5Q96G74 571 aa9.78□□□□□ -0.84
CSDE1-207ENST00000483407 SAMD9Q5K651 1589 aa9.78□□□□□ -0.84
CSDE1-207ENST00000483407 ABCA9Q8IUA7 1624 aa9.78□□□□□ -0.84
CSDE1-207ENST00000483407 RAPGEF6Q8TEU7 1601 aa9.78□□□□□ -0.84
CSDE1-207ENST00000483407 RIOK3O14730 519 aaKnown RBP9.77□□□□□ -0.85
CSDE1-207ENST00000483407 CHRM1P11229 460 aaPredicted RBP9.77□□□□□ -0.85
CSDE1-207ENST00000483407 POTEGQ6S5H5 508 aa9.77□□□□□ -0.85
CSDE1-207ENST00000483407 TAOK2Q9UL54 1235 aa9.77□□□□□ -0.85
CSDE1-207ENST00000483407 ARID4BQ4LE39 1312 aaPredicted RBP9.77□□□□□ -0.85
CSDE1-207ENST00000483407 FHOD3Q2V2M9 1422 aa9.76□□□□□ -0.85
CSDE1-207ENST00000483407 KIF21BO75037 1637 aa9.76□□□□□ -0.85
CSDE1-207ENST00000483407 NUP153P49790 1475 aaKnown RBP9.76□□□□□ -0.85
CSDE1-207ENST00000483407 LMTK3Q96Q04 1460 aa9.76□□□□□ -0.85
CSDE1-207ENST00000483407 ILDR2Q71H61 639 aa9.75□□□□□ -0.85
CSDE1-207ENST00000483407 RASEFQ8IZ41 740 aa9.75□□□□□ -0.85
CSDE1-207ENST00000483407 TSHZ2Q9NRE2 1034 aa9.75□□□□□ -0.85
CSDE1-207ENST00000483407 FARP1Q9Y4F1 1045 aaPredicted RBP9.75□□□□□ -0.85
CSDE1-207ENST00000483407 SOCS7O14512 581 aa9.74□□□□□ -0.85
CSDE1-207ENST00000483407 PTPRMP28827 1452 aa9.73□□□□□ -0.85
CSDE1-207ENST00000483407 DENND4BO75064 1496 aaPredicted RBP9.72□□□□□ -0.85
CSDE1-207ENST00000483407 AKNAQ7Z591 1439 aa9.72□□□□□ -0.85
CSDE1-207ENST00000483407 EFCAB5A4FU69 1503 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms