RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 FANCAO15360 1455 aa23.6■■□□□ 1.37
CCM2-215ENST00000482714 ARHGAP5Q13017 1502 aa23.57■■□□□ 1.36
CCM2-215ENST00000482714 AKNAQ7Z591 1439 aa23.57■■□□□ 1.36
CCM2-215ENST00000482714 RSPH4AQ5TD94 716 aa23.57■■□□□ 1.36
CCM2-215ENST00000482714 CDC42BPAQ5VT25 1732 aa23.57■■□□□ 1.36
CCM2-215ENST00000482714 PREX2Q70Z35 1606 aa23.57■■□□□ 1.36
CCM2-215ENST00000482714 TSPOAP1O95153 1857 aa23.56■■□□□ 1.36
CCM2-215ENST00000482714 ITSN2Q9NZM3 1697 aa23.56■■□□□ 1.36
CCM2-215ENST00000482714 PPRC1Q5VV67 1664 aaKnown RBP23.56■■□□□ 1.36
CCM2-215ENST00000482714 CDC42BPBQ9Y5S2 1711 aa23.55■■□□□ 1.36
CCM2-215ENST00000482714 CFAP74Q9C0B2 1584 aa23.55■■□□□ 1.36
CCM2-215ENST00000482714 ZNF777Q9ULD5 760 aaPredicted RBP23.55■■□□□ 1.36
CCM2-215ENST00000482714 PLEKHH2Q8IVE3 1493 aa23.54■■□□□ 1.36
CCM2-215ENST00000482714 KIAA1107Q9UPP5 1409 aa23.54■■□□□ 1.36
CCM2-215ENST00000482714 FGD6Q6ZV73 1430 aa23.5■■□□□ 1.35
CCM2-215ENST00000482714 SCAPERQ9BY12 1400 aa23.49■■□□□ 1.35
CCM2-215ENST00000482714 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.48■■□□□ 1.35
CCM2-215ENST00000482714 ADGRL1O94910 1474 aa23.48■■□□□ 1.35
CCM2-215ENST00000482714 ZNF644Q9H582 1327 aaPredicted RBP23.47■■□□□ 1.35
CCM2-215ENST00000482714 DENND4BO75064 1496 aaPredicted RBP23.45■■□□□ 1.35
CCM2-215ENST00000482714 HNRNPMP52272 730 aaKnown RBP eCLIP23.44■■□□□ 1.342e-6■■■□□ 15.7
CCM2-215ENST00000482714 TCOF1Q13428 1488 aaKnown RBP23.44■■□□□ 1.34
CCM2-215ENST00000482714 SAMD9LQ8IVG5 1584 aa23.43■■□□□ 1.34
CCM2-215ENST00000482714 RRBP1Q9P2E9 1410 aaKnown RBP23.42■■□□□ 1.34
CCM2-215ENST00000482714 CAMSAP2Q08AD1 1489 aa23.42■■□□□ 1.34
CCM2-215ENST00000482714 ABCC1P33527 1531 aa23.41■■□□□ 1.34
CCM2-215ENST00000482714 MBD5Q9P267 1494 aa23.4■■□□□ 1.34
CCM2-215ENST00000482714 COL17A1Q9UMD9 1497 aaPredicted RBP23.4■■□□□ 1.34
CCM2-215ENST00000482714 TSPY4P0CV99 314 aa23.4■■□□□ 1.34
CCM2-215ENST00000482714 TSPY10P0CW01 314 aa23.4■■□□□ 1.34
CCM2-215ENST00000482714 PTPN23Q9H3S7 1636 aa23.4■■□□□ 1.34
CCM2-215ENST00000482714 RAPGEF3O95398 923 aa23.39■■□□□ 1.34
CCM2-215ENST00000482714 FAM50AQ14320 339 aaKnown RBP23.39■■□□□ 1.34
CCM2-215ENST00000482714 AFAP1Q8N556 730 aa23.39■■□□□ 1.34
CCM2-215ENST00000482714 ZNF518AQ6AHZ1 1483 aa23.38■■□□□ 1.33
CCM2-215ENST00000482714 ARHGEF12Q9NZN5 1544 aa23.38■■□□□ 1.33
CCM2-215ENST00000482714 POGZQ7Z3K3 1410 aa23.36■■□□□ 1.33
CCM2-215ENST00000482714 KDM6BO15054 1643 aa23.36■■□□□ 1.33
CCM2-215ENST00000482714 TRAPPC8Q9Y2L5 1435 aa23.35■■□□□ 1.33
CCM2-215ENST00000482714 ARHGEF5Q12774 1597 aa23.34■■□□□ 1.33
CCM2-215ENST00000482714 SYCP2Q9BX26 1530 aa23.34■■□□□ 1.33
CCM2-215ENST00000482714 MAGI2Q86UL8 1455 aa23.33■■□□□ 1.32
CCM2-215ENST00000482714 CCDC141Q6ZP82 1450 aa23.32■■□□□ 1.32
CCM2-215ENST00000482714 SPAG9O60271 1321 aaKnown RBP23.32■■□□□ 1.32
CCM2-215ENST00000482714 RTEL1-TNFRSF6BF6WH68 1400 aa23.31■■□□□ 1.32
CCM2-215ENST00000482714 MLH3Q9UHC1 1453 aa23.31■■□□□ 1.32
CCM2-215ENST00000482714 ABCC5O15440 1437 aa23.29■■□□□ 1.32
CCM2-215ENST00000482714 RICTORQ6R327 1708 aa23.28■■□□□ 1.32
CCM2-215ENST00000482714 KDM5CP41229 1560 aa23.28■■□□□ 1.32
CCM2-215ENST00000482714 DAPK1P53355 1430 aa23.26■■□□□ 1.31
CCM2-215ENST00000482714 ZMYM4Q5VZL5 1548 aa23.26■■□□□ 1.31
CCM2-215ENST00000482714 MYT1LQ9UL68 1186 aa23.26■■□□□ 1.31
CCM2-215ENST00000482714 DNMT1P26358 1616 aaKnown RBP23.24■■□□□ 1.31
CCM2-215ENST00000482714 FRMPD1Q5SYB0 1578 aa23.23■■□□□ 1.31
CCM2-215ENST00000482714 SHANK2Q9UPX8 1470 aa23.23■■□□□ 1.31
CCM2-215ENST00000482714 C9orf84Q5VXU9 1444 aa23.2■■□□□ 1.3
CCM2-215ENST00000482714 MAST1Q9Y2H9 1570 aa23.2■■□□□ 1.3
CCM2-215ENST00000482714 ANKRD30AQ9BXX3 1397 aa23.19■■□□□ 1.3
CCM2-215ENST00000482714 TRIM26Q12899 539 aaPredicted RBP23.18■■□□□ 1.3
CCM2-215ENST00000482714 HECW2Q9P2P5 1572 aa23.18■■□□□ 1.3
CCM2-215ENST00000482714 ITGAEP38570 1179 aa23.17■■□□□ 1.3
CCM2-215ENST00000482714 ROCK1Q13464 1354 aa23.17■■□□□ 1.3
CCM2-215ENST00000482714 CHIC2Q9UKJ5 165 aa23.17■■□□□ 1.3
CCM2-215ENST00000482714 ATP7AQ04656 1500 aa23.16■■□□□ 1.3
CCM2-215ENST00000482714 NCOA1Q15788 1441 aa23.16■■□□□ 1.3
CCM2-215ENST00000482714 ATP10AO60312 1499 aa23.16■■□□□ 1.3
CCM2-215ENST00000482714 ZFYVE16Q7Z3T8 1539 aa23.16■■□□□ 1.3
CCM2-215ENST00000482714 PTPRKQ15262 1439 aa23.15■■□□□ 1.3
CCM2-215ENST00000482714 KIDINS220Q9ULH0 1771 aa23.14■■□□□ 1.3
CCM2-215ENST00000482714 ADGRL2O95490 1459 aa23.14■■□□□ 1.3
CCM2-215ENST00000482714 INO80Q9ULG1 1556 aaPredicted RBP23.13■■□□□ 1.29
CCM2-215ENST00000482714 YEATS2Q9ULM3 1422 aa23.13■■□□□ 1.29
CCM2-215ENST00000482714 DHX29Q7Z478 1369 aaKnown RBP23.12■■□□□ 1.29
CCM2-215ENST00000482714 CROCC2H7BZ55 1655 aa23.11■■□□□ 1.29
CCM2-215ENST00000482714 AEBP2Q6ZN18 517 aaPredicted RBP23.11■■□□□ 1.29
CCM2-215ENST00000482714 RRP7BPQ9NSQ0 103 aa23.11■■□□□ 1.29
CCM2-215ENST00000482714 KIF15Q9NS87 1388 aa23.08■■□□□ 1.28
CCM2-215ENST00000482714 ARHGEF40Q8TER5 1519 aa23.08■■□□□ 1.28
CCM2-215ENST00000482714 A2MP01023 1474 aa23.07■■□□□ 1.28
CCM2-215ENST00000482714 PLXNC1O60486 1568 aa23.07■■□□□ 1.28
CCM2-215ENST00000482714 REREQ9P2R6 1566 aa23.07■■□□□ 1.28
CCM2-215ENST00000482714 DIP2CQ9Y2E4 1556 aa23.06■■□□□ 1.28
CCM2-215ENST00000482714 KDM4FA0A1W2PPD8 638 aa23.05■■□□□ 1.28
CCM2-215ENST00000482714 ACIN1Q9UKV3 1341 aaKnown RBP23.05■■□□□ 1.28
CCM2-215ENST00000482714 DUOX2Q9NRD8 1548 aa23.05■■□□□ 1.28
CCM2-215ENST00000482714 ADGBQ8N7X0 1667 aa23.04■■□□□ 1.28
CCM2-215ENST00000482714 ABCA6Q8N139 1617 aa23.03■■□□□ 1.28
CCM2-215ENST00000482714 AGLP35573 1532 aa23.03■■□□□ 1.28
CCM2-215ENST00000482714 PPP6R1Q9UPN7 881 aa23.02■■□□□ 1.28
CCM2-215ENST00000482714 HFM1A2PYH4 1435 aa23■■□□□ 1.27
CCM2-215ENST00000482714 ERBINQ96RT1 1412 aa23■■□□□ 1.27
CCM2-215ENST00000482714 ANKRD50Q9ULJ7 1429 aa23■■□□□ 1.27
CCM2-215ENST00000482714 ARID4BQ4LE39 1312 aaPredicted RBP22.99■■□□□ 1.27
CCM2-215ENST00000482714 KIF3BO15066 747 aa22.98■■□□□ 1.27
CCM2-215ENST00000482714 HRCP23327 699 aa22.98■■□□□ 1.27
CCM2-215ENST00000482714 NAIPQ13075 1403 aa22.97■■□□□ 1.27
CCM2-215ENST00000482714 SETD5Q9C0A6 1442 aa22.92■■□□□ 1.26
CCM2-215ENST00000482714 EIF2AK4Q9P2K8 1649 aaKnown RBP22.91■■□□□ 1.26
CCM2-215ENST00000482714 GGT6Q6P531 493 aa22.91■■□□□ 1.26
CCM2-215ENST00000482714 BCORL1Q5H9F3 1711 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms