RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 CFAP74Q9C0B2 1584 aa20.52■□□□□ 0.88
HDAC1-208ENST00000482310 COL17A1Q9UMD9 1497 aaPredicted RBP20.51■□□□□ 0.87
HDAC1-208ENST00000482310 GPATCH8Q9UKJ3 1502 aaKnown RBP20.51■□□□□ 0.87
HDAC1-208ENST00000482310 TEX14Q8IWB6 1497 aa20.5■□□□□ 0.87
HDAC1-208ENST00000482310 PLCH2O75038 1416 aa20.49■□□□□ 0.87
HDAC1-208ENST00000482310 FANCAO15360 1455 aa20.49■□□□□ 0.87
HDAC1-208ENST00000482310 ZNF777Q9ULD5 760 aaPredicted RBP20.48■□□□□ 0.87
HDAC1-208ENST00000482310 PHLDB1Q86UU1 1377 aa20.47■□□□□ 0.87
HDAC1-208ENST00000482310 SAMD9LQ8IVG5 1584 aa20.46■□□□□ 0.87
HDAC1-208ENST00000482310 MYOM3Q5VTT5 1437 aa20.45■□□□□ 0.86
HDAC1-208ENST00000482310 ARAP3Q8WWN8 1544 aa20.45■□□□□ 0.86
HDAC1-208ENST00000482310 CFDP1Q9UEE9 299 aaPredicted RBP20.44■□□□□ 0.86
HDAC1-208ENST00000482310 PTPN23Q9H3S7 1636 aa20.43■□□□□ 0.86
HDAC1-208ENST00000482310 AKNAQ7Z591 1439 aa20.41■□□□□ 0.86
HDAC1-208ENST00000482310 NEO1Q92859 1461 aa20.41■□□□□ 0.86
HDAC1-208ENST00000482310 ADGRL1O94910 1474 aa20.4■□□□□ 0.86
HDAC1-208ENST00000482310 ABCC1P33527 1531 aa20.4■□□□□ 0.86
HDAC1-208ENST00000482310 CAMSAP2Q08AD1 1489 aa20.4■□□□□ 0.86
HDAC1-208ENST00000482310 EFCAB2Q5VUJ9 269 aa20.4■□□□□ 0.86
HDAC1-208ENST00000482310 SYCP2Q9BX26 1530 aa20.4■□□□□ 0.86
HDAC1-208ENST00000482310 FGD6Q6ZV73 1430 aa20.38■□□□□ 0.85
HDAC1-208ENST00000482310 ZNF644Q9H582 1327 aaPredicted RBP20.38■□□□□ 0.85
HDAC1-208ENST00000482310 RICTORQ6R327 1708 aa20.38■□□□□ 0.85
HDAC1-208ENST00000482310 MIA2Q96PC5 1412 aa20.34■□□□□ 0.85
HDAC1-208ENST00000482310 SCAPERQ9BY12 1400 aa20.34■□□□□ 0.85
HDAC1-208ENST00000482310 FRMPD1Q5SYB0 1578 aa20.34■□□□□ 0.85
HDAC1-208ENST00000482310 ARHGEF12Q9NZN5 1544 aa20.33■□□□□ 0.85
HDAC1-208ENST00000482310 FAM50AQ14320 339 aaKnown RBP20.32■□□□□ 0.84
HDAC1-208ENST00000482310 HNRNPMP52272 730 aaKnown RBP eCLIP20.31■□□□□ 0.84
HDAC1-208ENST00000482310 CROCC2H7BZ55 1655 aa20.31■□□□□ 0.84
HDAC1-208ENST00000482310 DENND4BO75064 1496 aaPredicted RBP20.3■□□□□ 0.84
HDAC1-208ENST00000482310 PLEKHH2Q8IVE3 1493 aa20.3■□□□□ 0.84
HDAC1-208ENST00000482310 RAPGEF3O95398 923 aa20.29■□□□□ 0.84
HDAC1-208ENST00000482310 TRAPPC8Q9Y2L5 1435 aa20.28■□□□□ 0.84
HDAC1-208ENST00000482310 TCOF1Q13428 1488 aaKnown RBP20.28■□□□□ 0.84
HDAC1-208ENST00000482310 POGZQ7Z3K3 1410 aa20.27■□□□□ 0.84
HDAC1-208ENST00000482310 DNMT1P26358 1616 aaKnown RBP20.27■□□□□ 0.83
HDAC1-208ENST00000482310 ARHGEF5Q12774 1597 aa20.25■□□□□ 0.83
HDAC1-208ENST00000482310 ZNF518AQ6AHZ1 1483 aa20.24■□□□□ 0.83
HDAC1-208ENST00000482310 MYT1LQ9UL68 1186 aa20.24■□□□□ 0.83
HDAC1-208ENST00000482310 KIAA1107Q9UPP5 1409 aa20.24■□□□□ 0.83
HDAC1-208ENST00000482310 HECW2Q9P2P5 1572 aa20.24■□□□□ 0.83
HDAC1-208ENST00000482310 CCDC141Q6ZP82 1450 aa20.24■□□□□ 0.83
HDAC1-208ENST00000482310 ITGAEP38570 1179 aa20.23■□□□□ 0.83
HDAC1-208ENST00000482310 AFAP1Q8N556 730 aa20.23■□□□□ 0.83
HDAC1-208ENST00000482310 RRBP1Q9P2E9 1410 aaKnown RBP20.23■□□□□ 0.83
HDAC1-208ENST00000482310 MBD5Q9P267 1494 aa20.23■□□□□ 0.83
HDAC1-208ENST00000482310 KDM5CP41229 1560 aa20.22■□□□□ 0.83
HDAC1-208ENST00000482310 KIDINS220Q9ULH0 1771 aa20.21■□□□□ 0.83
HDAC1-208ENST00000482310 ILDR1Q86SU0 546 aaPredicted RBP20.21■□□□□ 0.83
HDAC1-208ENST00000482310 ADGBQ8N7X0 1667 aa20.21■□□□□ 0.83
HDAC1-208ENST00000482310 ZMYM4Q5VZL5 1548 aa20.2■□□□□ 0.82
HDAC1-208ENST00000482310 INO80Q9ULG1 1556 aaPredicted RBP20.2■□□□□ 0.82
HDAC1-208ENST00000482310 DAPK1P53355 1430 aa20.19■□□□□ 0.82
HDAC1-208ENST00000482310 ATP7AQ04656 1500 aa20.18■□□□□ 0.82
HDAC1-208ENST00000482310 ZFYVE16Q7Z3T8 1539 aa20.18■□□□□ 0.82
HDAC1-208ENST00000482310 ABCA6Q8N139 1617 aa20.18■□□□□ 0.82
HDAC1-208ENST00000482310 ABCC5O15440 1437 aa20.17■□□□□ 0.82
HDAC1-208ENST00000482310 SPAG9O60271 1321 aaKnown RBP20.16■□□□□ 0.82
HDAC1-208ENST00000482310 CHIC2Q9UKJ5 165 aa20.15■□□□□ 0.82
HDAC1-208ENST00000482310 C9orf84Q5VXU9 1444 aa20.15■□□□□ 0.82
HDAC1-208ENST00000482310 ARHGEF40Q8TER5 1519 aa20.15■□□□□ 0.82
HDAC1-208ENST00000482310 MAST1Q9Y2H9 1570 aa20.14■□□□□ 0.81
HDAC1-208ENST00000482310 YEATS2Q9ULM3 1422 aa20.14■□□□□ 0.81
HDAC1-208ENST00000482310 DIP2CQ9Y2E4 1556 aa20.13■□□□□ 0.81
HDAC1-208ENST00000482310 TSPY4P0CV99 314 aa20.12■□□□□ 0.81
HDAC1-208ENST00000482310 TSPY10P0CW01 314 aa20.12■□□□□ 0.81
HDAC1-208ENST00000482310 SHANK2Q9UPX8 1470 aa20.11■□□□□ 0.81
HDAC1-208ENST00000482310 PTPRKQ15262 1439 aa20.1■□□□□ 0.81
HDAC1-208ENST00000482310 SIGLEC1Q9BZZ2 1709 aa20.1■□□□□ 0.81
HDAC1-208ENST00000482310 MLH3Q9UHC1 1453 aa20.1■□□□□ 0.81
HDAC1-208ENST00000482310 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.09■□□□□ 0.81
HDAC1-208ENST00000482310 RSPH4AQ5TD94 716 aa20.09■□□□□ 0.81
HDAC1-208ENST00000482310 PLXNC1O60486 1568 aa20.08■□□□□ 0.81
HDAC1-208ENST00000482310 MAGI2Q86UL8 1455 aa20.07■□□□□ 0.8
HDAC1-208ENST00000482310 RTEL1-TNFRSF6BF6WH68 1400 aa20.04■□□□□ 0.8
HDAC1-208ENST00000482310 RRP7BPQ9NSQ0 103 aa20.03■□□□□ 0.8
HDAC1-208ENST00000482310 ATP10AO60312 1499 aa20.02■□□□□ 0.8
HDAC1-208ENST00000482310 GCC2Q8IWJ2 1684 aa20.02■□□□□ 0.8
HDAC1-208ENST00000482310 ADGRL2O95490 1459 aa20.01■□□□□ 0.79
HDAC1-208ENST00000482310 ANKRD30AQ9BXX3 1397 aa20.01■□□□□ 0.79
HDAC1-208ENST00000482310 KIF15Q9NS87 1388 aa20.01■□□□□ 0.79
HDAC1-208ENST00000482310 A2MP01023 1474 aa20■□□□□ 0.79
HDAC1-208ENST00000482310 NCOA1Q15788 1441 aa19.98■□□□□ 0.79
HDAC1-208ENST00000482310 ARID4BQ4LE39 1312 aaPredicted RBP19.98■□□□□ 0.79
HDAC1-208ENST00000482310 DUOX2Q9NRD8 1548 aa19.97■□□□□ 0.79
HDAC1-208ENST00000482310 REREQ9P2R6 1566 aa19.96■□□□□ 0.79
HDAC1-208ENST00000482310 TRIM26Q12899 539 aaPredicted RBP19.96■□□□□ 0.79
HDAC1-208ENST00000482310 ADAMTSL3P82987 1691 aa19.95■□□□□ 0.78
HDAC1-208ENST00000482310 EIF2AK4Q9P2K8 1649 aaKnown RBP19.94■□□□□ 0.78
HDAC1-208ENST00000482310 ROCK1Q13464 1354 aa19.94■□□□□ 0.78
HDAC1-208ENST00000482310 MLECQ14165 292 aa19.93■□□□□ 0.78
HDAC1-208ENST00000482310 BCORL1Q5H9F3 1711 aa19.93■□□□□ 0.78
HDAC1-208ENST00000482310 DHX29Q7Z478 1369 aaKnown RBP19.92■□□□□ 0.78
HDAC1-208ENST00000482310 FER1L4A9Z1Z3 1794 aa19.91■□□□□ 0.78
HDAC1-208ENST00000482310 PTPRMP28827 1452 aa19.9■□□□□ 0.78
HDAC1-208ENST00000482310 CEP152O94986 1710 aa19.9■□□□□ 0.78
HDAC1-208ENST00000482310 NAIPQ13075 1403 aa19.89■□□□□ 0.77
HDAC1-208ENST00000482310 ERBINQ96RT1 1412 aa19.89■□□□□ 0.77
HDAC1-208ENST00000482310 ANKRD50Q9ULJ7 1429 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms