RNA–Protein interactions for RNA: ENST00000481788.1

RBM28-205, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 1,052 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-205ENST00000481788 TOP2BQ02880 1626 aa12.3□□□□□ -0.44
RBM28-205ENST00000481788 PHF12Q96QT6 1004 aa12.3□□□□□ -0.44
RBM28-205ENST00000481788 CCDC61Q9Y6R9 512 aa12.3□□□□□ -0.44
RBM28-205ENST00000481788 RUSC2Q8N2Y8 1516 aa12.3□□□□□ -0.44
RBM28-205ENST00000481788 BIVM-ERCC5R4GMW8 1640 aa12.29□□□□□ -0.44
RBM28-205ENST00000481788 DCAF8Q5TAQ9 597 aa12.28□□□□□ -0.44
RBM28-205ENST00000481788 KDM6BO15054 1643 aa12.28□□□□□ -0.44
RBM28-205ENST00000481788 GSE1Q14687 1217 aa12.27□□□□□ -0.45
RBM28-205ENST00000481788 KIAA0586Q9BVV6 1533 aa12.21□□□□□ -0.45
RBM28-205ENST00000481788 COL17A1Q9UMD9 1497 aaPredicted RBP12.21□□□□□ -0.45
RBM28-205ENST00000481788 KIF12Q96FN5 646 aa12.2□□□□□ -0.46
RBM28-205ENST00000481788 ADGRL1O94910 1474 aa12.2□□□□□ -0.46
RBM28-205ENST00000481788 GALR2O43603 387 aaPredicted RBP12.19□□□□□ -0.46
RBM28-205ENST00000481788 DCBLD2Q96PD2 775 aa12.19□□□□□ -0.46
RBM28-205ENST00000481788 PPRC1Q5VV67 1664 aaKnown RBP12.17□□□□□ -0.46
RBM28-205ENST00000481788 CIZ1Q9ULV3 898 aaPredicted RBP12.17□□□□□ -0.46
RBM28-205ENST00000481788 IGF1RP08069 1367 aa12.17□□□□□ -0.46
RBM28-205ENST00000481788 MS4A3Q96HJ5 214 aa12.16□□□□□ -0.46
RBM28-205ENST00000481788 SGIP1Q9BQI5 828 aa12.16□□□□□ -0.46
RBM28-205ENST00000481788 GLI2P10070 1586 aa12.16□□□□□ -0.46
RBM28-205ENST00000481788 ABCC2Q92887 1545 aa12.16□□□□□ -0.46
RBM28-205ENST00000481788 MAP3K13O43283 966 aa12.15□□□□□ -0.46
RBM28-205ENST00000481788 PTPRGP23470 1445 aa12.14□□□□□ -0.47
RBM28-205ENST00000481788 ASXL2Q76L83 1435 aa12.14□□□□□ -0.47
RBM28-205ENST00000481788 TSPOAP1O95153 1857 aa12.14□□□□□ -0.47
RBM28-205ENST00000481788 HECW2Q9P2P5 1572 aa12.13□□□□□ -0.47
RBM28-205ENST00000481788 PYGBP11216 843 aa12.13□□□□□ -0.47
RBM28-205ENST00000481788 PCDHB13Q9Y5F0 798 aa12.13□□□□□ -0.47
RBM28-205ENST00000481788 PLB1Q6P1J6 1458 aa12.12□□□□□ -0.47
RBM28-205ENST00000481788 UHRF1BP1LA0JNW5 1464 aa12.11□□□□□ -0.47
RBM28-205ENST00000481788 TNIKQ9UKE5 1360 aa12.09□□□□□ -0.47
RBM28-205ENST00000481788 EPRSP07814 1512 aaKnown RBP12.08□□□□□ -0.48
RBM28-205ENST00000481788 CHRM1P11229 460 aaPredicted RBP12.07□□□□□ -0.48
RBM28-205ENST00000481788 KDM5BQ9UGL1 1544 aa12.06□□□□□ -0.48
RBM28-205ENST00000481788 SUPT5HO00267 1087 aaKnown RBP12.06□□□□□ -0.48
RBM28-205ENST00000481788 UACAQ9BZF9 1416 aa12.05□□□□□ -0.48
RBM28-205ENST00000481788 MAP3K4Q9Y6R4 1608 aa12.05□□□□□ -0.48
RBM28-205ENST00000481788 DISP1Q96F81 1524 aa12.05□□□□□ -0.48
RBM28-205ENST00000481788 ZNF467Q7Z7K2 595 aaPredicted RBP12.04□□□□□ -0.48
RBM28-205ENST00000481788 IFNL1Q8IU54 200 aa12.04□□□□□ -0.48
RBM28-205ENST00000481788 CUL7Q14999 1698 aa12.03□□□□□ -0.48
RBM28-205ENST00000481788 KIF27Q86VH2 1401 aa12.03□□□□□ -0.48
RBM28-205ENST00000481788 CARMIL2Q6F5E8 1435 aa12.03□□□□□ -0.48
RBM28-205ENST00000481788 TIE1P35590 1138 aa12.02□□□□□ -0.49
RBM28-205ENST00000481788 CARMIL1Q5VZK9 1371 aa12.02□□□□□ -0.49
RBM28-205ENST00000481788 POTEIP0CG38 1075 aa12.01□□□□□ -0.49
RBM28-205ENST00000481788 TEX14Q8IWB6 1497 aa12.01□□□□□ -0.49
RBM28-205ENST00000481788 ASTLQ6HA08 431 aaPredicted RBP12□□□□□ -0.49
RBM28-205ENST00000481788 FBXO41Q8TF61 875 aa12□□□□□ -0.49
RBM28-205ENST00000481788 TTBK1Q5TCY1 1321 aaPredicted RBP12□□□□□ -0.49
RBM28-205ENST00000481788 IQGAP2Q13576 1575 aa11.98□□□□□ -0.49
RBM28-205ENST00000481788 ATMINO43313 823 aaPredicted RBP11.97□□□□□ -0.49
RBM28-205ENST00000481788 BMP2KQ9NSY1 1161 aaPredicted RBP11.97□□□□□ -0.49
RBM28-205ENST00000481788 PCDHB8Q9UN66 801 aa11.96□□□□□ -0.49
RBM28-205ENST00000481788 MAGI3Q5TCQ9 1506 aa11.96□□□□□ -0.5
RBM28-205ENST00000481788 UGGT2Q9NYU1 1516 aa11.96□□□□□ -0.5
RBM28-205ENST00000481788 WDR7Q9Y4E6 1490 aa11.95□□□□□ -0.5
RBM28-205ENST00000481788 TRPC6Q9Y210 931 aa11.95□□□□□ -0.5
RBM28-205ENST00000481788 ZCCHC11Q5TAX3 1644 aaKnown RBP11.95□□□□□ -0.5
RBM28-205ENST00000481788 TTLL13PA6NNM8 815 aa11.93□□□□□ -0.5
RBM28-205ENST00000481788 TMEM106CQ9BVX2 250 aa11.93□□□□□ -0.5
RBM28-205ENST00000481788 ATN1P54259 1190 aaPredicted RBP11.92□□□□□ -0.5
RBM28-205ENST00000481788 SLC39A7Q92504 469 aa11.92□□□□□ -0.5
RBM28-205ENST00000481788 CD109Q6YHK3 1445 aa11.91□□□□□ -0.5
RBM28-205ENST00000481788 KIAA0556O60303 1618 aa11.9□□□□□ -0.5
RBM28-205ENST00000481788 ECM2O94769 699 aaPredicted RBP11.89□□□□□ -0.51
RBM28-205ENST00000481788 C7P10643 843 aa11.89□□□□□ -0.51
RBM28-205ENST00000481788 PDAP1Q13442 181 aaKnown RBP11.89□□□□□ -0.51
RBM28-205ENST00000481788 ARAP3Q8WWN8 1544 aa11.88□□□□□ -0.51
RBM28-205ENST00000481788 PTPRMP28827 1452 aa11.88□□□□□ -0.51
RBM28-205ENST00000481788 PELP1Q8IZL8 1130 aaKnown RBP11.87□□□□□ -0.51
RBM28-205ENST00000481788 TRIM35Q9UPQ4 493 aa11.87□□□□□ -0.51
RBM28-205ENST00000481788 KIF21BO75037 1637 aa11.86□□□□□ -0.51
RBM28-205ENST00000481788 PSEN1P49768 467 aa11.86□□□□□ -0.51
RBM28-205ENST00000481788 METRNQ9UJH8 293 aa11.86□□□□□ -0.51
RBM28-205ENST00000481788 TAOK2Q9UL54 1235 aa11.86□□□□□ -0.51
RBM28-205ENST00000481788 ADAMTSL3P82987 1691 aa11.85□□□□□ -0.51
RBM28-205ENST00000481788 ABCA8O94911 1581 aa11.85□□□□□ -0.51
RBM28-205ENST00000481788 RIOK3O14730 519 aaKnown RBP11.85□□□□□ -0.51
RBM28-205ENST00000481788 CFAP43Q8NDM7 1665 aa11.84□□□□□ -0.51
RBM28-205ENST00000481788 RAPGEF2Q9Y4G8 1499 aa11.84□□□□□ -0.51
RBM28-205ENST00000481788 LMTK3Q96Q04 1460 aa11.83□□□□□ -0.52
RBM28-205ENST00000481788 GOLGA2Q08379 1002 aa11.83□□□□□ -0.52
RBM28-205ENST00000481788 PKD2Q13563 968 aa11.83□□□□□ -0.52
RBM28-205ENST00000481788 IER5LQ5T953 404 aa11.83□□□□□ -0.52
RBM28-205ENST00000481788 KCNH8Q96L42 1107 aa11.81□□□□□ -0.52
RBM28-205ENST00000481788 PCF11O94913 1555 aaKnown RBP11.8□□□□□ -0.52
RBM28-205ENST00000481788 VGFO15240 615 aaPredicted RBP11.8□□□□□ -0.52
RBM28-205ENST00000481788 SEC24BO95487 1268 aa11.79□□□□□ -0.52
RBM28-205ENST00000481788 LHX8Q68G74 356 aa11.79□□□□□ -0.52
RBM28-205ENST00000481788 RNF25Q96BH1 459 aaPredicted RBP11.78□□□□□ -0.52
RBM28-205ENST00000481788 PHLDB1Q86UU1 1377 aa11.78□□□□□ -0.52
RBM28-205ENST00000481788 RAPGEF3O95398 923 aa11.77□□□□□ -0.53
RBM28-205ENST00000481788 ATP10BO94823 1461 aa11.76□□□□□ -0.53
RBM28-205ENST00000481788 FRMPD1Q5SYB0 1578 aa11.76□□□□□ -0.53
RBM28-205ENST00000481788 MKRN3Q13064 507 aaKnown RBP11.76□□□□□ -0.53
RBM28-205ENST00000481788 GOLGA3Q08378 1498 aa11.75□□□□□ -0.53
RBM28-205ENST00000481788 MADDQ8WXG6 1647 aa11.75□□□□□ -0.53
RBM28-205ENST00000481788 BCORL1Q5H9F3 1711 aa11.74□□□□□ -0.53
RBM28-205ENST00000481788 ABCA9Q8IUA7 1624 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms