RNA–Protein interactions for RNA: ENST00000481118.1

LARP4B-208, Transcript of La ribonucleoprotein domain family member 4B, humanhuman

TSL 3

Gene LARP4B, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4B-208ENST00000481118 ABCA8O94911 1581 aa20.71■□□□□ 0.91
LARP4B-208ENST00000481118 MAGI2Q86UL8 1455 aa20.69■□□□□ 0.9
LARP4B-208ENST00000481118 ZMYM4Q5VZL5 1548 aa20.68■□□□□ 0.9
LARP4B-208ENST00000481118 CAMSAP1Q5T5Y3 1602 aa20.64■□□□□ 0.9
LARP4B-208ENST00000481118 NCKAP5LQ9HCH0 1330 aa20.63■□□□□ 0.89
LARP4B-208ENST00000481118 ARID3CA6NKF2 412 aa20.63■□□□□ 0.89
LARP4B-208ENST00000481118 TRAPPC8Q9Y2L5 1435 aa20.61■□□□□ 0.89
LARP4B-208ENST00000481118 POTEAQ6S8J7 498 aa20.61■□□□□ 0.89
LARP4B-208ENST00000481118 FAM9AQ8IZU1 332 aaPredicted RBP20.6■□□□□ 0.89
LARP4B-208ENST00000481118 SENP3Q9H4L4 574 aaPredicted RBP20.59■□□□□ 0.89
LARP4B-208ENST00000481118 ATP10AO60312 1499 aa20.58■□□□□ 0.89
LARP4B-208ENST00000481118 PKD2Q13563 968 aa20.58■□□□□ 0.89
LARP4B-208ENST00000481118 C9orf84Q5VXU9 1444 aa20.58■□□□□ 0.88
LARP4B-208ENST00000481118 PTPRKQ15262 1439 aa20.57■□□□□ 0.88
LARP4B-208ENST00000481118 CFAP74Q9C0B2 1584 aa20.57■□□□□ 0.88
LARP4B-208ENST00000481118 ESF1Q9H501 851 aaKnown RBP20.57■□□□□ 0.88
LARP4B-208ENST00000481118 C3P01024 1663 aa20.57■□□□□ 0.88
LARP4B-208ENST00000481118 ATP10BO94823 1461 aa20.56■□□□□ 0.88
LARP4B-208ENST00000481118 HECW1Q76N89 1606 aa20.55■□□□□ 0.88
LARP4B-208ENST00000481118 SETD1AO15047 1707 aaKnown RBP20.54■□□□□ 0.88
LARP4B-208ENST00000481118 PPP6R1Q9UPN7 881 aa20.53■□□□□ 0.88
LARP4B-208ENST00000481118 GOLGA3Q08378 1498 aa20.53■□□□□ 0.88
LARP4B-208ENST00000481118 UPF1Q92900 1129 aaKnown RBP eCLIP20.52■□□□□ 0.88
LARP4B-208ENST00000481118 CPS1P31327 1500 aa20.51■□□□□ 0.87
LARP4B-208ENST00000481118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.47■□□□□ 0.87
LARP4B-208ENST00000481118 HNRNPUL2Q1KMD3 747 aaKnown RBP20.47■□□□□ 0.87
LARP4B-208ENST00000481118 PLA2R1Q13018 1463 aa20.44■□□□□ 0.86
LARP4B-208ENST00000481118 SRCAPQ6ZRS2 3230 aa20.41■□□□□ 0.86
LARP4B-208ENST00000481118 SUPT6HQ7KZ85 1726 aaKnown RBP20.39■□□□□ 0.86
LARP4B-208ENST00000481118 TCOF1Q13428 1488 aaKnown RBP20.39■□□□□ 0.85
LARP4B-208ENST00000481118 RAPGEF2Q9Y4G8 1499 aa20.38■□□□□ 0.85
LARP4B-208ENST00000481118 SCAPERQ9BY12 1400 aa20.37■□□□□ 0.85
LARP4B-208ENST00000481118 ALKQ9UM73 1620 aa20.37■□□□□ 0.85
LARP4B-208ENST00000481118 SHANK2Q9UPX8 1470 aa20.37■□□□□ 0.85
LARP4B-208ENST00000481118 NPATQ14207 1427 aa20.36■□□□□ 0.85
LARP4B-208ENST00000481118 CNTLNQ9NXG0 1405 aa20.34■□□□□ 0.85
LARP4B-208ENST00000481118 MYT1LQ9UL68 1186 aa20.32■□□□□ 0.84
LARP4B-208ENST00000481118 PLEKHD1A6NEE1 506 aa20.28■□□□□ 0.84
LARP4B-208ENST00000481118 CTTNBP2Q8WZ74 1663 aa20.28■□□□□ 0.84
LARP4B-208ENST00000481118 AGLP35573 1532 aa20.27■□□□□ 0.84
LARP4B-208ENST00000481118 ZNF142P52746 1687 aaPredicted RBP20.27■□□□□ 0.84
LARP4B-208ENST00000481118 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.24■□□□□ 0.836e-7■■□□□ 13.1
LARP4B-208ENST00000481118 CEP170BQ9Y4F5 1589 aaPredicted RBP20.23■□□□□ 0.83
LARP4B-208ENST00000481118 MYO3AQ8NEV4 1616 aa20.22■□□□□ 0.83
LARP4B-208ENST00000481118 REREQ9P2R6 1566 aa20.21■□□□□ 0.83
LARP4B-208ENST00000481118 FOXD1Q16676 465 aa20.21■□□□□ 0.83
LARP4B-208ENST00000481118 TRIM52Q96A61 297 aa20.21■□□□□ 0.83
LARP4B-208ENST00000481118 RAPGEF6Q8TEU7 1601 aa20.19■□□□□ 0.82
LARP4B-208ENST00000481118 ZMYM3Q14202 1370 aa20.19■□□□□ 0.82
LARP4B-208ENST00000481118 RNF17Q9BXT8 1623 aaKnown RBP20.18■□□□□ 0.82
LARP4B-208ENST00000481118 P3H3Q8IVL6 736 aa20.18■□□□□ 0.82
LARP4B-208ENST00000481118 MROH2AA6NES4 1674 aa20.18■□□□□ 0.82
LARP4B-208ENST00000481118 ZNF518AQ6AHZ1 1483 aa20.18■□□□□ 0.82
LARP4B-208ENST00000481118 IFFO2Q5TF58 517 aa20.17■□□□□ 0.82
LARP4B-208ENST00000481118 DIP2CQ9Y2E4 1556 aa20.17■□□□□ 0.82
LARP4B-208ENST00000481118 POLR1AO95602 1720 aaPredicted RBP20.14■□□□□ 0.81
LARP4B-208ENST00000481118 VWDEQ8N2E2 1590 aa20.13■□□□□ 0.81
LARP4B-208ENST00000481118 ZRANB1Q9UGI0 708 aa20.13■□□□□ 0.81
LARP4B-208ENST00000481118 PLCH2O75038 1416 aa20.12■□□□□ 0.81
LARP4B-208ENST00000481118 EFCAB2Q5VUJ9 269 aa20.12■□□□□ 0.81
LARP4B-208ENST00000481118 AFAP1Q8N556 730 aa20.11■□□□□ 0.81
LARP4B-208ENST00000481118 LRRC7Q96NW7 1537 aa20.11■□□□□ 0.81
LARP4B-208ENST00000481118 KDM5CP41229 1560 aa20.08■□□□□ 0.81
LARP4B-208ENST00000481118 ZNF772Q68DY9 489 aaPredicted RBP20.08■□□□□ 0.81
LARP4B-208ENST00000481118 NEURL4Q96JN8 1562 aa20.08■□□□□ 0.8
LARP4B-208ENST00000481118 NUP153P49790 1475 aaKnown RBP20.07■□□□□ 0.8
LARP4B-208ENST00000481118 RBM33Q96EV2 1170 aaKnown RBP20.07■□□□□ 0.8
LARP4B-208ENST00000481118 ABCA6Q8N139 1617 aa20.06■□□□□ 0.8
LARP4B-208ENST00000481118 ANKLE2Q86XL3 938 aa20.05■□□□□ 0.8
LARP4B-208ENST00000481118 DNMT1P26358 1616 aaKnown RBP20.05■□□□□ 0.8
LARP4B-208ENST00000481118 A2ML1A8K2U0 1454 aa20.05■□□□□ 0.8
LARP4B-208ENST00000481118 FAM135BQ49AJ0 1406 aa20.03■□□□□ 0.8
LARP4B-208ENST00000481118 RXRBP28702 533 aa20.03■□□□□ 0.8
LARP4B-208ENST00000481118 SYNMO15061 1565 aa20.03■□□□□ 0.8
LARP4B-208ENST00000481118 MLH3Q9UHC1 1453 aa20■□□□□ 0.79
LARP4B-208ENST00000481118 CLTCQ00610 1675 aaKnown RBP19.97■□□□□ 0.79
LARP4B-208ENST00000481118 SETBP1Q9Y6X0 1596 aa19.96■□□□□ 0.79
LARP4B-208ENST00000481118 NPHP4O75161 1426 aaPredicted RBP19.96■□□□□ 0.79
LARP4B-208ENST00000481118 MEX3CQ5U5Q3 659 aaKnown RBP19.96■□□□□ 0.79
LARP4B-208ENST00000481118 CDK12Q9NYV4 1490 aaPredicted RBP19.96■□□□□ 0.79
LARP4B-208ENST00000481118 MYO5CQ9NQX4 1742 aa19.95■□□□□ 0.78
LARP4B-208ENST00000481118 STRCP1A6NGW2 1772 aa19.94■□□□□ 0.78
LARP4B-208ENST00000481118 SUPT5HO00267 1087 aaKnown RBP19.94■□□□□ 0.78
LARP4B-208ENST00000481118 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.93■□□□□ 0.782e-7■■■□□ 14.9
LARP4B-208ENST00000481118 JCADQ9P266 1359 aa19.92■□□□□ 0.78
LARP4B-208ENST00000481118 MED14O60244 1454 aa19.91■□□□□ 0.78
LARP4B-208ENST00000481118 CDK13Q14004 1512 aaKnown RBP19.91■□□□□ 0.78
LARP4B-208ENST00000481118 THEMISQ8N1K5 641 aaPredicted RBP19.89■□□□□ 0.77
LARP4B-208ENST00000481118 IQGAP1P46940 1657 aa19.87■□□□□ 0.77
LARP4B-208ENST00000481118 DEPDC5O75140 1603 aa19.87■□□□□ 0.77
LARP4B-208ENST00000481118 ARHGAP5Q13017 1502 aa19.86■□□□□ 0.77
LARP4B-208ENST00000481118 NUTM2BA6NNL0 878 aaPredicted RBP19.86■□□□□ 0.77
LARP4B-208ENST00000481118 NUTM2EB1AL46 878 aaPredicted RBP19.86■□□□□ 0.77
LARP4B-208ENST00000481118 NUTM2DQ5VT03 806 aaPredicted RBP19.86■□□□□ 0.77
LARP4B-208ENST00000481118 NUTM2AQ8IVF1 878 aaPredicted RBP19.86■□□□□ 0.77
LARP4B-208ENST00000481118 ROBO1Q9Y6N7 1651 aa19.86■□□□□ 0.77
LARP4B-208ENST00000481118 SAMD9Q5K651 1589 aa19.84■□□□□ 0.77
LARP4B-208ENST00000481118 ABCC1P33527 1531 aa19.83■□□□□ 0.77
LARP4B-208ENST00000481118 ITSN2Q9NZM3 1697 aa19.81■□□□□ 0.76
LARP4B-208ENST00000481118 SPATA31A6Q5VVP1 1343 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms