RNA–Protein interactions for RNA: ENST00000481118.1

LARP4B-208, Transcript of La ribonucleoprotein domain family member 4B, humanhuman

TSL 3

Gene LARP4B, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4B-208ENST00000481118 NISCHQ9Y2I1 1504 aa30.2■■■□□ 2.42
LARP4B-208ENST00000481118 ABCC9O60706 1549 aa29.59■■■□□ 2.33
LARP4B-208ENST00000481118 DNAJC5BQ9UF47 199 aa29.27■■■□□ 2.28
LARP4B-208ENST00000481118 DNAJC5Q9H3Z4 198 aa28.25■■■□□ 2.11
LARP4B-208ENST00000481118 CCDC180Q9P1Z9 1646 aa27.88■■■□□ 2.05
LARP4B-208ENST00000481118 RB1CC1Q8TDY2 1594 aa27.43■■□□□ 1.98
LARP4B-208ENST00000481118 PABPN1Q86U42 306 aaKnown RBP eCLIP27.29■■□□□ 1.96
LARP4B-208ENST00000481118 CECR2Q9BXF3 1484 aa26.87■■□□□ 1.89
LARP4B-208ENST00000481118 NACADO15069 1562 aa26.8■■□□□ 1.88
LARP4B-208ENST00000481118 UNC13AQ9UPW8 1703 aa26.71■■□□□ 1.87
LARP4B-208ENST00000481118 CC2D2AQ9P2K1 1620 aa26.63■■□□□ 1.85
LARP4B-208ENST00000481118 BICRAQ9NZM4 1560 aa26.58■■□□□ 1.85
LARP4B-208ENST00000481118 DCAF8L2P0C7V8 631 aa26.41■■□□□ 1.82
LARP4B-208ENST00000481118 TRIM41Q8WV44 630 aa26.34■■□□□ 1.81
LARP4B-208ENST00000481118 CUX2O14529 1486 aa26.26■■□□□ 1.79
LARP4B-208ENST00000481118 SHROOM4Q9ULL8 1493 aa26.15■■□□□ 1.78
LARP4B-208ENST00000481118 EIF4G1Q04637 1599 aaKnown RBP26.13■■□□□ 1.77
LARP4B-208ENST00000481118 MYO15BQ96JP2 1530 aa25.82■■□□□ 1.72
LARP4B-208ENST00000481118 ERCC6Q03468 1493 aa25.76■■□□□ 1.71
LARP4B-208ENST00000481118 AEBP2Q6ZN18 517 aaPredicted RBP25.36■■□□□ 1.65
LARP4B-208ENST00000481118 SCRIBQ14160 1630 aa25.34■■□□□ 1.65
LARP4B-208ENST00000481118 THOC2Q8NI27 1593 aaKnown RBP24.97■■□□□ 1.59
LARP4B-208ENST00000481118 NESP48681 1621 aa24.88■■□□□ 1.57
LARP4B-208ENST00000481118 OSCARQ8IYS5 282 aa24.84■■□□□ 1.57
LARP4B-208ENST00000481118 DCAF1Q9Y4B6 1507 aa24.83■■□□□ 1.57
LARP4B-208ENST00000481118 NCAPD3P42695 1498 aa24.75■■□□□ 1.55
LARP4B-208ENST00000481118 BAZ1AQ9NRL2 1556 aaPredicted RBP24.73■■□□□ 1.55
LARP4B-208ENST00000481118 TRHP20396 242 aaPredicted RBP24.72■■□□□ 1.55
LARP4B-208ENST00000481118 SMARCA2P51531 1590 aa24.71■■□□□ 1.55
LARP4B-208ENST00000481118 ZCCHC6Q5VYS8 1495 aaKnown RBP24.62■■□□□ 1.53
LARP4B-208ENST00000481118 RIMBP3CA6NJZ7 1639 aa24.61■■□□□ 1.53
LARP4B-208ENST00000481118 RIMBP3BA6NNM3 1639 aa24.61■■□□□ 1.53
LARP4B-208ENST00000481118 RIMBP3Q9UFD9 1639 aa24.61■■□□□ 1.53
LARP4B-208ENST00000481118 KIF21AQ7Z4S6 1674 aa24.51■■□□□ 1.51
LARP4B-208ENST00000481118 ILDR1Q86SU0 546 aaPredicted RBP24.5■■□□□ 1.51
LARP4B-208ENST00000481118 LAMC3Q9Y6N6 1575 aa24.49■■□□□ 1.51
LARP4B-208ENST00000481118 PDS5BQ9NTI5 1447 aa24.45■■□□□ 1.51
LARP4B-208ENST00000481118 ATAD2BQ9ULI0 1458 aa24.4■■□□□ 1.5
LARP4B-208ENST00000481118 HMGXB3Q12766 1538 aa24.39■■□□□ 1.49
LARP4B-208ENST00000481118 CYB5RLQ6IPT4 315 aa24.36■■□□□ 1.49
LARP4B-208ENST00000481118 ARHGEF11O15085 1522 aa24.35■■□□□ 1.49
LARP4B-208ENST00000481118 MRC2Q9UBG0 1479 aa24.29■■□□□ 1.48
LARP4B-208ENST00000481118 WDR62O43379 1518 aa24.26■■□□□ 1.47
LARP4B-208ENST00000481118 BAZ1BQ9UIG0 1483 aaKnown RBP24.12■■□□□ 1.45
LARP4B-208ENST00000481118 ARAP1Q96P48 1450 aa23.96■■□□□ 1.43
LARP4B-208ENST00000481118 CADPSQ9ULU8 1353 aa23.93■■□□□ 1.42
LARP4B-208ENST00000481118 SMARCA4P51532 1647 aa23.93■■□□□ 1.42
LARP4B-208ENST00000481118 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
LARP4B-208ENST00000481118 PEG3Q9GZU2 1588 aa23.69■■□□□ 1.38
LARP4B-208ENST00000481118 RSF1Q96T23 1441 aaPredicted RBP23.68■■□□□ 1.38
LARP4B-208ENST00000481118 FANCD2Q9BXW9 1451 aa23.66■■□□□ 1.38
LARP4B-208ENST00000481118 URB2Q14146 1524 aaKnown RBP23.53■■□□□ 1.36
LARP4B-208ENST00000481118 ZNF608Q9ULD9 1512 aaPredicted RBP23.53■■□□□ 1.36
LARP4B-208ENST00000481118 CHD1O14646 1710 aa23.49■■□□□ 1.35
LARP4B-208ENST00000481118 IFT140Q96RY7 1462 aa23.45■■□□□ 1.34
LARP4B-208ENST00000481118 FBLN2P98095 1184 aa23.44■■□□□ 1.34
LARP4B-208ENST00000481118 KDM4FA0A1W2PPD8 638 aa23.37■■□□□ 1.33
LARP4B-208ENST00000481118 EIF4G3O43432 1585 aaKnown RBP23.32■■□□□ 1.32
LARP4B-208ENST00000481118 FBXO41Q8TF61 875 aa23.28■■□□□ 1.32
LARP4B-208ENST00000481118 CFTRP13569 1480 aa23.26■■□□□ 1.31
LARP4B-208ENST00000481118 MROH2BQ7Z745 1585 aa23.23■■□□□ 1.31
LARP4B-208ENST00000481118 ERCC6L2Q5T890 1561 aa23.22■■□□□ 1.31
LARP4B-208ENST00000481118 LMTK3Q96Q04 1460 aa23.21■■□□□ 1.31
LARP4B-208ENST00000481118 CLASP1Q7Z460 1538 aa23.14■■□□□ 1.3
LARP4B-208ENST00000481118 AQRO60306 1485 aaKnown RBP eCLIP23.12■■□□□ 1.296e-7■■■■□ 25.3
LARP4B-208ENST00000481118 GAPVD1Q14C86 1478 aa23.11■■□□□ 1.29
LARP4B-208ENST00000481118 SOCS7O14512 581 aa23.09■■□□□ 1.29
LARP4B-208ENST00000481118 SYNJ1O43426 1573 aa23.06■■□□□ 1.28
LARP4B-208ENST00000481118 HECW2Q9P2P5 1572 aa23.03■■□□□ 1.28
LARP4B-208ENST00000481118 KIF13AQ9H1H9 1805 aa23.01■■□□□ 1.27
LARP4B-208ENST00000481118 TOPBP1Q92547 1522 aa22.99■■□□□ 1.27
LARP4B-208ENST00000481118 CHMP7Q8WUX9 453 aaPredicted RBP22.97■■□□□ 1.27
LARP4B-208ENST00000481118 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
LARP4B-208ENST00000481118 TARBP1Q13395 1621 aaKnown RBP22.89■■□□□ 1.25
LARP4B-208ENST00000481118 PRDM2Q13029 1718 aa22.88■■□□□ 1.25
LARP4B-208ENST00000481118 WIZO95785 1651 aa22.87■■□□□ 1.25
LARP4B-208ENST00000481118 KDM6BO15054 1643 aa22.86■■□□□ 1.25
LARP4B-208ENST00000481118 SNAPC4Q5SXM2 1469 aa22.84■■□□□ 1.25
LARP4B-208ENST00000481118 ILDR2Q71H61 639 aa22.83■■□□□ 1.25
LARP4B-208ENST00000481118 FAM69CQ0P6D2 419 aa22.81■■□□□ 1.24
LARP4B-208ENST00000481118 SYNJ2O15056 1496 aa22.79■■□□□ 1.24
LARP4B-208ENST00000481118 ADGRL1O94910 1474 aa22.78■■□□□ 1.24
LARP4B-208ENST00000481118 DNMBPQ6XZF7 1577 aa22.76■■□□□ 1.23
LARP4B-208ENST00000481118 TDRD9Q8NDG6 1382 aaKnown RBP22.73■■□□□ 1.23
LARP4B-208ENST00000481118 DISP3Q9P2K9 1392 aa22.73■■□□□ 1.23
LARP4B-208ENST00000481118 MAGI1Q96QZ7 1491 aaPredicted RBP22.73■■□□□ 1.23
LARP4B-208ENST00000481118 ABCC10Q5T3U5 1492 aa22.68■■□□□ 1.22
LARP4B-208ENST00000481118 POLA1P09884 1462 aaPredicted RBP22.64■■□□□ 1.21
LARP4B-208ENST00000481118 WDR97A6NE52 1622 aa22.6■■□□□ 1.21
LARP4B-208ENST00000481118 RAD54L2Q9Y4B4 1467 aa22.59■■□□□ 1.21
LARP4B-208ENST00000481118 SOGA1O94964 1423 aa22.57■■□□□ 1.2
LARP4B-208ENST00000481118 GRIN2BQ13224 1484 aa22.55■■□□□ 1.2
LARP4B-208ENST00000481118 NPM1P06748 294 aaKnown RBP eCLIP22.55■■□□□ 1.2
LARP4B-208ENST00000481118 DIP2BQ9P265 1576 aa22.53■■□□□ 1.2
LARP4B-208ENST00000481118 TSPOAP1O95153 1857 aa22.51■■□□□ 1.19
LARP4B-208ENST00000481118 TOP2AP11388 1531 aaKnown RBP22.47■■□□□ 1.19
LARP4B-208ENST00000481118 CEP170Q5SW79 1584 aa22.47■■□□□ 1.19
LARP4B-208ENST00000481118 MAPKBP1O60336 1514 aa22.45■■□□□ 1.18
LARP4B-208ENST00000481118 PBRM1Q86U86 1689 aa22.31■■□□□ 1.16
LARP4B-208ENST00000481118 TOP2BQ02880 1626 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms