RNA–Protein interactions for RNA: ENST00000480975.5

GNAS-238, Transcript of GNAS complex locus, human

TSL 5

Gene GNAS, Length 1,534 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GNAS-238	ENST00000480975	ITSN2	Q9NZM3	1697 aa		30.32	■■■□□ 2.44
GNAS-238	ENST00000480975	CDC42BPA	Q5VT25	1732 aa		30.31	■■■□□ 2.44
GNAS-238	ENST00000480975	ARAP3	Q8WWN8	1544 aa		30.3	■■■□□ 2.44
GNAS-238	ENST00000480975	PREX2	Q70Z35	1606 aa		30.29	■■■□□ 2.44
GNAS-238	ENST00000480975	FANCA	O15360	1455 aa		30.28	■■■□□ 2.44
GNAS-238	ENST00000480975	CDC42BPB	Q9Y5S2	1711 aa		30.26	■■■□□ 2.43
GNAS-238	ENST00000480975	MIA2	Q96PC5	1412 aa		30.26	■■■□□ 2.43
GNAS-238	ENST00000480975	NEO1	Q92859	1461 aa		30.23	■■■□□ 2.43
GNAS-238	ENST00000480975	CFAP74	Q9C0B2	1584 aa		30.23	■■■□□ 2.43
GNAS-238	ENST00000480975	FGD6	Q6ZV73	1430 aa		30.21	■■■□□ 2.43
GNAS-238	ENST00000480975	AKNA	Q7Z591	1439 aa		30.21	■■■□□ 2.43
GNAS-238	ENST00000480975	PPRC1	Q5VV67	1664 aa	Known RBP	30.2	■■■□□ 2.42
GNAS-238	ENST00000480975	FAM50A	Q14320	339 aa	Known RBP	30.17	■■■□□ 2.42
GNAS-238	ENST00000480975	ZNF644	Q9H582	1327 aa	Predicted RBP	30.16	■■■□□ 2.42
GNAS-238	ENST00000480975	PLEKHH2	Q8IVE3	1493 aa		30.16	■■■□□ 2.42
GNAS-238	ENST00000480975	ADGRL1	O94910	1474 aa		30.14	■■■□□ 2.41
GNAS-238	ENST00000480975	SCAPER	Q9BY12	1400 aa		30.12	■■■□□ 2.41
GNAS-238	ENST00000480975	PTPN23	Q9H3S7	1636 aa		30.12	■■■□□ 2.41
GNAS-238	ENST00000480975	CAMSAP2	Q08AD1	1489 aa		30.11	■■■□□ 2.41
GNAS-238	ENST00000480975	HNRNPM	P52272	730 aa	Known RBP eCLIP	30.11	■■■□□ 2.41	2e-13	■■□□□ 13.8
GNAS-238	ENST00000480975	SAMD9L	Q8IVG5	1584 aa		30.1	■■■□□ 2.41
GNAS-238	ENST00000480975	KIAA1107	Q9UPP5	1409 aa		30.09	■■■□□ 2.41
GNAS-238	ENST00000480975	RSPH4A	Q5TD94	716 aa		30.09	■■■□□ 2.41
GNAS-238	ENST00000480975	RRBP1	Q9P2E9	1410 aa	Known RBP	30.06	■■■□□ 2.4
GNAS-238	ENST00000480975	DENND4B	O75064	1496 aa	Predicted RBP	30.06	■■■□□ 2.4
GNAS-238	ENST00000480975	TCOF1	Q13428	1488 aa	Known RBP	30.06	■■■□□ 2.4
GNAS-238	ENST00000480975	ABCC1	P33527	1531 aa		30.05	■■■□□ 2.4
GNAS-238	ENST00000480975	SYCP2	Q9BX26	1530 aa		30.02	■■■□□ 2.4
GNAS-238	ENST00000480975	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	30.02	■■■□□ 2.4	4e-16	■■■□□ 16.9
GNAS-238	ENST00000480975	RAPGEF3	O95398	923 aa		30.01	■■■□□ 2.4
GNAS-238	ENST00000480975	TSPY4	P0CV99	314 aa		30.01	■■■□□ 2.39
GNAS-238	ENST00000480975	TSPY10	P0CW01	314 aa		30.01	■■■□□ 2.39
GNAS-238	ENST00000480975	AFAP1	Q8N556	730 aa		30	■■■□□ 2.39
GNAS-238	ENST00000480975	MYT1L	Q9UL68	1186 aa		29.99	■■■□□ 2.39
GNAS-238	ENST00000480975	ARHGEF12	Q9NZN5	1544 aa		29.99	■■■□□ 2.39
GNAS-238	ENST00000480975	KDM6B	O15054	1643 aa		29.97	■■■□□ 2.39
GNAS-238	ENST00000480975	ZNF518A	Q6AHZ1	1483 aa		29.97	■■■□□ 2.39
GNAS-238	ENST00000480975	MBD5	Q9P267	1494 aa		29.97	■■■□□ 2.39
GNAS-238	ENST00000480975	TRAPPC8	Q9Y2L5	1435 aa		29.96	■■■□□ 2.39
GNAS-238	ENST00000480975	ITGAE	P38570	1179 aa		29.96	■■■□□ 2.39
GNAS-238	ENST00000480975	POGZ	Q7Z3K3	1410 aa		29.95	■■■□□ 2.39
GNAS-238	ENST00000480975	CCDC141	Q6ZP82	1450 aa		29.95	■■■□□ 2.38
GNAS-238	ENST00000480975	ARHGEF5	Q12774	1597 aa		29.94	■■■□□ 2.38
GNAS-238	ENST00000480975	COL17A1	Q9UMD9	1497 aa	Predicted RBP	29.93	■■■□□ 2.38
GNAS-238	ENST00000480975	SPAG9	O60271	1321 aa	Known RBP	29.92	■■■□□ 2.38
GNAS-238	ENST00000480975	DAPK1	P53355	1430 aa		29.89	■■■□□ 2.38
GNAS-238	ENST00000480975	ABCC5	O15440	1437 aa		29.88	■■■□□ 2.37
GNAS-238	ENST00000480975	DNMT1	P26358	1616 aa	Known RBP	29.87	■■■□□ 2.37
GNAS-238	ENST00000480975	TRIM26	Q12899	539 aa	Predicted RBP	29.87	■■■□□ 2.37
GNAS-238	ENST00000480975	RICTOR	Q6R327	1708 aa		29.87	■■■□□ 2.37
GNAS-238	ENST00000480975	CHIC2	Q9UKJ5	165 aa		29.85	■■■□□ 2.37
GNAS-238	ENST00000480975	KDM5C	P41229	1560 aa		29.82	■■■□□ 2.36
GNAS-238	ENST00000480975	C9orf84	Q5VXU9	1444 aa		29.82	■■■□□ 2.36
GNAS-238	ENST00000480975	FRMPD1	Q5SYB0	1578 aa		29.81	■■■□□ 2.36
GNAS-238	ENST00000480975	MAGI2	Q86UL8	1455 aa		29.8	■■■□□ 2.36
GNAS-238	ENST00000480975	MLH3	Q9UHC1	1453 aa		29.8	■■■□□ 2.36
GNAS-238	ENST00000480975	RTEL1-TNFRSF6B	F6WH68	1400 aa		29.8	■■■□□ 2.36
GNAS-238	ENST00000480975	SHANK2	Q9UPX8	1470 aa		29.79	■■■□□ 2.36
GNAS-238	ENST00000480975	ZMYM4	Q5VZL5	1548 aa		29.78	■■■□□ 2.36
GNAS-238	ENST00000480975	HECW2	Q9P2P5	1572 aa		29.77	■■■□□ 2.36
GNAS-238	ENST00000480975	ANKRD30A	Q9BXX3	1397 aa		29.76	■■■□□ 2.35
GNAS-238	ENST00000480975	CROCC2	H7BZ55	1655 aa		29.76	■■■□□ 2.35
GNAS-238	ENST00000480975	ATP7A	Q04656	1500 aa		29.75	■■■□□ 2.35
GNAS-238	ENST00000480975	MAST1	Q9Y2H9	1570 aa		29.75	■■■□□ 2.35
GNAS-238	ENST00000480975	PTPRK	Q15262	1439 aa		29.74	■■■□□ 2.35
GNAS-238	ENST00000480975	RRP7BP	Q9NSQ0	103 aa		29.72	■■■□□ 2.35
GNAS-238	ENST00000480975	ZFYVE16	Q7Z3T8	1539 aa		29.72	■■■□□ 2.35
GNAS-238	ENST00000480975	INO80	Q9ULG1	1556 aa	Predicted RBP	29.71	■■■□□ 2.35
GNAS-238	ENST00000480975	KIDINS220	Q9ULH0	1771 aa		29.7	■■■□□ 2.34
GNAS-238	ENST00000480975	ROCK1	Q13464	1354 aa		29.68	■■■□□ 2.34
GNAS-238	ENST00000480975	NCOA1	Q15788	1441 aa		29.68	■■■□□ 2.34
GNAS-238	ENST00000480975	YEATS2	Q9ULM3	1422 aa		29.68	■■■□□ 2.34
GNAS-238	ENST00000480975	ADGRL2	O95490	1459 aa		29.67	■■■□□ 2.34
GNAS-238	ENST00000480975	ADGB	Q8N7X0	1667 aa		29.66	■■■□□ 2.34
GNAS-238	ENST00000480975	ATP10A	O60312	1499 aa		29.65	■■■□□ 2.34
GNAS-238	ENST00000480975	KIF15	Q9NS87	1388 aa		29.65	■■■□□ 2.34
GNAS-238	ENST00000480975	PLXNC1	O60486	1568 aa		29.62	■■■□□ 2.33
GNAS-238	ENST00000480975	ABCA6	Q8N139	1617 aa		29.6	■■■□□ 2.33
GNAS-238	ENST00000480975	DIP2C	Q9Y2E4	1556 aa		29.6	■■■□□ 2.33
GNAS-238	ENST00000480975	ARHGEF40	Q8TER5	1519 aa		29.6	■■■□□ 2.33
GNAS-238	ENST00000480975	DHX29	Q7Z478	1369 aa	Known RBP	29.6	■■■□□ 2.33
GNAS-238	ENST00000480975	A2M	P01023	1474 aa		29.59	■■■□□ 2.33
GNAS-238	ENST00000480975	DUOX2	Q9NRD8	1548 aa		29.57	■■■□□ 2.33
GNAS-238	ENST00000480975	ARID4B	Q4LE39	1312 aa	Predicted RBP	29.57	■■■□□ 2.32
GNAS-238	ENST00000480975	PCGF6	Q9BYE7	350 aa		29.55	■■■□□ 2.32
GNAS-238	ENST00000480975	HFM1	A2PYH4	1435 aa		29.53	■■■□□ 2.32
GNAS-238	ENST00000480975	ANKRD50	Q9ULJ7	1429 aa		29.53	■■■□□ 2.32
GNAS-238	ENST00000480975	KIF3B	O15066	747 aa		29.5	■■■□□ 2.31
GNAS-238	ENST00000480975	NAIP	Q13075	1403 aa		29.5	■■■□□ 2.31
GNAS-238	ENST00000480975	ERBIN	Q96RT1	1412 aa		29.5	■■■□□ 2.31
GNAS-238	ENST00000480975	RERE	Q9P2R6	1566 aa		29.5	■■■□□ 2.31
GNAS-238	ENST00000480975	SETD5	Q9C0A6	1442 aa		29.47	■■■□□ 2.31
GNAS-238	ENST00000480975	GGT6	Q6P531	493 aa		29.43	■■■□□ 2.3
GNAS-238	ENST00000480975	AGL	P35573	1532 aa		29.43	■■■□□ 2.3
GNAS-238	ENST00000480975	GCC2	Q8IWJ2	1684 aa		29.43	■■■□□ 2.3
GNAS-238	ENST00000480975	MLEC	Q14165	292 aa		29.42	■■■□□ 2.3
GNAS-238	ENST00000480975	ACIN1	Q9UKV3	1341 aa	Known RBP	29.42	■■■□□ 2.3
GNAS-238	ENST00000480975	EIF2AK4	Q9P2K8	1649 aa	Known RBP	29.4	■■■□□ 2.3
GNAS-238	ENST00000480975	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	29.39	■■■□□ 2.3	4e-8	■□□□□ 9.9
GNAS-238	ENST00000480975	TRIM52	Q96A61	297 aa		29.36	■■■□□ 2.29

Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms