RNA–Protein interactions for RNA: ENST00000479795.1

TNXB-204, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 2,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-204ENST00000479795 RAPGEF6Q8TEU7 1601 aa24.41■■□□□ 1.5
TNXB-204ENST00000479795 AKNAQ7Z591 1439 aa24.41■■□□□ 1.5
TNXB-204ENST00000479795 PRG4Q92954 1404 aaPredicted RBP24.41■■□□□ 1.5
TNXB-204ENST00000479795 ABCC5O15440 1437 aa24.39■■□□□ 1.5
TNXB-204ENST00000479795 PLB1Q6P1J6 1458 aa24.39■■□□□ 1.49
TNXB-204ENST00000479795 HSPA5P11021 654 aaKnown RBP24.39■■□□□ 1.49
TNXB-204ENST00000479795 L3MBTL2Q969R5 705 aa24.39■■□□□ 1.49
TNXB-204ENST00000479795 ZNF777Q9ULD5 760 aaPredicted RBP24.39■■□□□ 1.49
TNXB-204ENST00000479795 CCER2I3L3R5 266 aa24.36■■□□□ 1.49
TNXB-204ENST00000479795 CEP170Q5SW79 1584 aa24.36■■□□□ 1.49
TNXB-204ENST00000479795 CFDP1Q9UEE9 299 aaPredicted RBP24.34■■□□□ 1.49
TNXB-204ENST00000479795 JPH4Q96JJ6 628 aa24.33■■□□□ 1.49
TNXB-204ENST00000479795 SLC4A1APQ9BWU0 796 aaKnown RBP24.33■■□□□ 1.49
TNXB-204ENST00000479795 MAGI1Q96QZ7 1491 aaPredicted RBP24.33■■□□□ 1.48
TNXB-204ENST00000479795 BCANQ96GW7 911 aa24.32■■□□□ 1.48
TNXB-204ENST00000479795 SYNJ2O15056 1496 aa24.32■■□□□ 1.48
TNXB-204ENST00000479795 WASHC2AQ641Q2 1341 aa24.31■■□□□ 1.48
TNXB-204ENST00000479795 DNMT1P26358 1616 aaKnown RBP24.31■■□□□ 1.48
TNXB-204ENST00000479795 ROCK1Q13464 1354 aa24.3■■□□□ 1.48
TNXB-204ENST00000479795 TROQ12816 1431 aaPredicted RBP24.29■■□□□ 1.48
TNXB-204ENST00000479795 EIF4G2P78344 907 aaKnown RBP eCLIP24.29■■□□□ 1.48
TNXB-204ENST00000479795 ANKRD30BQ9BXX2 1392 aa24.27■■□□□ 1.48
TNXB-204ENST00000479795 FKBP8Q14318 412 aa24.26■■□□□ 1.47
TNXB-204ENST00000479795 NBPF8Q3BBV2 869 aa24.25■■□□□ 1.47
TNXB-204ENST00000479795 CAMSAP2Q08AD1 1489 aa24.25■■□□□ 1.47
TNXB-204ENST00000479795 KIF14Q15058 1648 aa24.24■■□□□ 1.47
TNXB-204ENST00000479795 CARMIL2Q6F5E8 1435 aa24.24■■□□□ 1.47
TNXB-204ENST00000479795 GPATCH8Q9UKJ3 1502 aaKnown RBP24.23■■□□□ 1.47
TNXB-204ENST00000479795 C11orf95C9JLR9 678 aaPredicted RBP24.22■■□□□ 1.47
TNXB-204ENST00000479795 RPRD2Q5VT52 1461 aaKnown RBP24.19■■□□□ 1.46
TNXB-204ENST00000479795 NUP160Q12769 1436 aa24.18■■□□□ 1.46
TNXB-204ENST00000479795 NCOA1Q15788 1441 aa24.18■■□□□ 1.46
TNXB-204ENST00000479795 PLEKHD1A6NEE1 506 aa24.17■■□□□ 1.46
TNXB-204ENST00000479795 CNGB1Q14028 1251 aaPredicted RBP24.15■■□□□ 1.46
TNXB-204ENST00000479795 PZPP20742 1482 aa24.13■■□□□ 1.45
TNXB-204ENST00000479795 TEX14Q8IWB6 1497 aa24.13■■□□□ 1.45
TNXB-204ENST00000479795 HNRNPUQ00839 825 aaKnown RBP eCLIP24.13■■□□□ 1.45
TNXB-204ENST00000479795 ITSN2Q9NZM3 1697 aa24.13■■□□□ 1.45
TNXB-204ENST00000479795 ZNF326Q5BKZ1 582 aaKnown RBP24.12■■□□□ 1.45
TNXB-204ENST00000479795 PKD2Q13563 968 aa24.11■■□□□ 1.45
TNXB-204ENST00000479795 CCDC184Q52MB2 194 aa24.1■■□□□ 1.45
TNXB-204ENST00000479795 ATP10BO94823 1461 aa24.09■■□□□ 1.45
TNXB-204ENST00000479795 CCDC7Q96M83 1385 aa24.09■■□□□ 1.45
TNXB-204ENST00000479795 NEFLP07196 543 aa24.09■■□□□ 1.45
TNXB-204ENST00000479795 ANKRD30AQ9BXX3 1397 aa24.08■■□□□ 1.45
TNXB-204ENST00000479795 CNTLNQ9NXG0 1405 aa24.07■■□□□ 1.44
TNXB-204ENST00000479795 ADCY10Q96PN6 1610 aa24.07■■□□□ 1.44
TNXB-204ENST00000479795 ADGBQ8N7X0 1667 aa24.05■■□□□ 1.44
TNXB-204ENST00000479795 PRKCSHP14314 528 aaPredicted RBP24.04■■□□□ 1.44
TNXB-204ENST00000479795 ABCA8O94911 1581 aa24.04■■□□□ 1.44
TNXB-204ENST00000479795 HNRNPMP52272 730 aaKnown RBP eCLIP24.04■■□□□ 1.44
TNXB-204ENST00000479795 ANKRD50Q9ULJ7 1429 aa24.04■■□□□ 1.44
TNXB-204ENST00000479795 KIF7Q2M1P5 1343 aa24.02■■□□□ 1.44
TNXB-204ENST00000479795 KIAA1107Q9UPP5 1409 aa24.02■■□□□ 1.44
TNXB-204ENST00000479795 ADGRL2O95490 1459 aa24.02■■□□□ 1.44
TNXB-204ENST00000479795 POLR3GLQ9BT43 218 aa24.02■■□□□ 1.44
TNXB-204ENST00000479795 CDC42BPAQ5VT25 1732 aa24.01■■□□□ 1.43
TNXB-204ENST00000479795 CROCC2H7BZ55 1655 aa24.01■■□□□ 1.43
TNXB-204ENST00000479795 PRKRIP1Q9H875 184 aaPredicted RBP24■■□□□ 1.43
TNXB-204ENST00000479795 ABCC10Q5T3U5 1492 aa24■■□□□ 1.43
TNXB-204ENST00000479795 TSPY4P0CV99 314 aa24■■□□□ 1.43
TNXB-204ENST00000479795 TSPY10P0CW01 314 aa24■■□□□ 1.43
TNXB-204ENST00000479795 NUP155O75694 1391 aa24■■□□□ 1.43
TNXB-204ENST00000479795 C9orf84Q5VXU9 1444 aa23.99■■□□□ 1.43
TNXB-204ENST00000479795 SPATA31E1Q6ZUB1 1445 aa23.99■■□□□ 1.43
TNXB-204ENST00000479795 FAM9BQ8IZU0 186 aa23.98■■□□□ 1.43
TNXB-204ENST00000479795 PTPRGP23470 1445 aa23.98■■□□□ 1.43
TNXB-204ENST00000479795 MRS2Q9HD23 443 aa23.95■■□□□ 1.42
TNXB-204ENST00000479795 IRX6P78412 446 aaPredicted RBP23.94■■□□□ 1.42
TNXB-204ENST00000479795 KDM2AQ9Y2K7 1162 aa23.91■■□□□ 1.42
TNXB-204ENST00000479795 USP47Q96K76 1375 aa23.9■■□□□ 1.42
TNXB-204ENST00000479795 KIF15Q9NS87 1388 aa23.9■■□□□ 1.42
TNXB-204ENST00000479795 MBD5Q9P267 1494 aa23.89■■□□□ 1.42
TNXB-204ENST00000479795 RBM19Q9Y4C8 960 aaKnown RBP23.89■■□□□ 1.42
TNXB-204ENST00000479795 SENP3-EIF4A1A0A087X0R7 540 aa23.88■■□□□ 1.41
TNXB-204ENST00000479795 SHANK2Q9UPX8 1470 aa23.86■■□□□ 1.41
TNXB-204ENST00000479795 BCORL1Q5H9F3 1711 aa23.82■■□□□ 1.4
TNXB-204ENST00000479795 DCAF11Q8TEB1 546 aa23.82■■□□□ 1.4
TNXB-204ENST00000479795 CARD11Q9BXL7 1154 aa23.82■■□□□ 1.4
TNXB-204ENST00000479795 CHD1O14646 1710 aa23.8■■□□□ 1.4
TNXB-204ENST00000479795 SAMD9LQ8IVG5 1584 aa23.8■■□□□ 1.4
TNXB-204ENST00000479795 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.79■■□□□ 1.4
TNXB-204ENST00000479795 POLR1AO95602 1720 aaPredicted RBP23.79■■□□□ 1.4
TNXB-204ENST00000479795 CDC42BPBQ9Y5S2 1711 aa23.79■■□□□ 1.4
TNXB-204ENST00000479795 CCDC141Q6ZP82 1450 aa23.77■■□□□ 1.4
TNXB-204ENST00000479795 DHX29Q7Z478 1369 aaKnown RBP23.76■■□□□ 1.39
TNXB-204ENST00000479795 KDM5CP41229 1560 aa23.75■■□□□ 1.39
TNXB-204ENST00000479795 ARHGEF5Q12774 1597 aa23.75■■□□□ 1.39
TNXB-204ENST00000479795 ERCC6L2Q5T890 1561 aa23.75■■□□□ 1.39
TNXB-204ENST00000479795 ST20-MTHFSA0A0A6YYL1 179 aa23.74■■□□□ 1.39
TNXB-204ENST00000479795 RGL3Q3MIN7 710 aa23.74■■□□□ 1.39
TNXB-204ENST00000479795 MSH5O43196 834 aa23.74■■□□□ 1.39
TNXB-204ENST00000479795 PREX2Q70Z35 1606 aa23.73■■□□□ 1.39
TNXB-204ENST00000479795 SYCP2Q9BX26 1530 aa23.73■■□□□ 1.39
TNXB-204ENST00000479795 ARHGAP5Q13017 1502 aa23.73■■□□□ 1.39
TNXB-204ENST00000479795 KDM5DQ9BY66 1539 aa23.72■■□□□ 1.39
TNXB-204ENST00000479795 UHRF1BP1Q6BDS2 1440 aa23.72■■□□□ 1.39
TNXB-204ENST00000479795 TTC37Q6PGP7 1564 aa23.71■■□□□ 1.39
TNXB-204ENST00000479795 RALGAPBQ86X10 1494 aa23.71■■□□□ 1.39
TNXB-204ENST00000479795 FAM135AQ9P2D6 1515 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms