RNA–Protein interactions for RNA: ENST00000479795.1

TNXB-204, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 2,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-204ENST00000479795 NISCHQ9Y2I1 1504 aa36.24■■■■□ 3.39
TNXB-204ENST00000479795 SHROOM4Q9ULL8 1493 aa31.04■■■□□ 2.56
TNXB-204ENST00000479795 CCDC180Q9P1Z9 1646 aa30.76■■■□□ 2.51
TNXB-204ENST00000479795 ZCCHC6Q5VYS8 1495 aaKnown RBP30.6■■■□□ 2.49
TNXB-204ENST00000479795 DCAF8L2P0C7V8 631 aa30.42■■■□□ 2.46
TNXB-204ENST00000479795 SUPT5HO00267 1087 aaKnown RBP30.38■■■□□ 2.45
TNXB-204ENST00000479795 DCAF1Q9Y4B6 1507 aa29.61■■■□□ 2.33
TNXB-204ENST00000479795 CHIC1Q5VXU3 224 aa29.36■■■□□ 2.29
TNXB-204ENST00000479795 MYO15BQ96JP2 1530 aa29.21■■■□□ 2.27
TNXB-204ENST00000479795 SCRIBQ14160 1630 aa29■■■□□ 2.23
TNXB-204ENST00000479795 ABCC9O60706 1549 aa28.85■■■□□ 2.21
TNXB-204ENST00000479795 RSF1Q96T23 1441 aaPredicted RBP28.67■■■□□ 2.18
TNXB-204ENST00000479795 LOC105371045A0A1W2PR82 267 aa28.59■■■□□ 2.17
TNXB-204ENST00000479795 NACADO15069 1562 aa28.52■■■□□ 2.16
TNXB-204ENST00000479795 PCGF6Q9BYE7 350 aa28.4■■■□□ 2.14
TNXB-204ENST00000479795 CECR2Q9BXF3 1484 aa28.37■■■□□ 2.13
TNXB-204ENST00000479795 RB1CC1Q8TDY2 1594 aa28.37■■■□□ 2.13
TNXB-204ENST00000479795 TRIM41Q8WV44 630 aa28.23■■■□□ 2.11
TNXB-204ENST00000479795 MROH2BQ7Z745 1585 aa28.23■■■□□ 2.11
TNXB-204ENST00000479795 HRCP23327 699 aa28.19■■■□□ 2.1
TNXB-204ENST00000479795 EHMT2Q96KQ7 1210 aa28.14■■■□□ 2.1
TNXB-204ENST00000479795 FAM9AQ8IZU1 332 aaPredicted RBP28.12■■■□□ 2.09
TNXB-204ENST00000479795 WIZO95785 1651 aa28.08■■■□□ 2.09
TNXB-204ENST00000479795 BAZ1AQ9NRL2 1556 aaPredicted RBP27.82■■■□□ 2.04
TNXB-204ENST00000479795 TRIM26Q12899 539 aaPredicted RBP27.78■■■□□ 2.04
TNXB-204ENST00000479795 PPARGC1BQ86YN6 1023 aaKnown RBP27.78■■■□□ 2.04
TNXB-204ENST00000479795 UNC13AQ9UPW8 1703 aa27.72■■■□□ 2.03
TNXB-204ENST00000479795 PABPN1Q86U42 306 aaKnown RBP eCLIP27.65■■■□□ 2.02
TNXB-204ENST00000479795 SMARCA4P51532 1647 aa27.62■■■□□ 2.01
TNXB-204ENST00000479795 TOP2AP11388 1531 aaKnown RBP27.55■■■□□ 2
TNXB-204ENST00000479795 EIF4G1Q04637 1599 aaKnown RBP27.52■■■□□ 2
TNXB-204ENST00000479795 CCDC88BA6NC98 1476 aa27.51■■□□□ 1.99
TNXB-204ENST00000479795 PELP1Q8IZL8 1130 aaKnown RBP27.49■■□□□ 1.99
TNXB-204ENST00000479795 ABCC8Q09428 1581 aa27.44■■□□□ 1.98
TNXB-204ENST00000479795 SMARCA2P51531 1590 aa27.42■■□□□ 1.98
TNXB-204ENST00000479795 BICRAQ9NZM4 1560 aa27.39■■□□□ 1.98
TNXB-204ENST00000479795 SOGA1O94964 1423 aa27.17■■□□□ 1.94
TNXB-204ENST00000479795 TTBK1Q5TCY1 1321 aaPredicted RBP27.1■■□□□ 1.93
TNXB-204ENST00000479795 RUSC2Q8N2Y8 1516 aa27.05■■□□□ 1.92
TNXB-204ENST00000479795 ZEB1P37275 1124 aaPredicted RBP27.03■■□□□ 1.92
TNXB-204ENST00000479795 PEG3Q9GZU2 1588 aa27.01■■□□□ 1.91
TNXB-204ENST00000479795 CSRNP3Q8WYN3 585 aa26.98■■□□□ 1.91
TNXB-204ENST00000479795 ATAD2BQ9ULI0 1458 aa26.98■■□□□ 1.91
TNXB-204ENST00000479795 UBTFP17480 764 aaKnown RBP26.95■■□□□ 1.9
TNXB-204ENST00000479795 WRNQ14191 1432 aaPredicted RBP eCLIP26.94■■□□□ 1.9
TNXB-204ENST00000479795 CEP162Q5TB80 1403 aa26.94■■□□□ 1.9
TNXB-204ENST00000479795 BAZ1BQ9UIG0 1483 aaKnown RBP26.91■■□□□ 1.9
TNXB-204ENST00000479795 TNIKQ9UKE5 1360 aa26.85■■□□□ 1.89
TNXB-204ENST00000479795 EEA1Q15075 1411 aa26.84■■□□□ 1.89
TNXB-204ENST00000479795 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.82■■□□□ 1.88
TNXB-204ENST00000479795 SYNJ1O43426 1573 aa26.81■■□□□ 1.88
TNXB-204ENST00000479795 SCAF1Q9H7N4 1312 aaKnown RBP26.8■■□□□ 1.88
TNXB-204ENST00000479795 GOLGA3Q08378 1498 aa26.73■■□□□ 1.87
TNXB-204ENST00000479795 CCER1Q8TC90 406 aaPredicted RBP26.7■■□□□ 1.87
TNXB-204ENST00000479795 RANGAP1P46060 587 aaPredicted RBP26.67■■□□□ 1.86
TNXB-204ENST00000479795 CEP164Q9UPV0 1460 aa26.58■■□□□ 1.85
TNXB-204ENST00000479795 KIF21BO75037 1637 aa26.49■■□□□ 1.83
TNXB-204ENST00000479795 RAPGEF2Q9Y4G8 1499 aa26.48■■□□□ 1.83
TNXB-204ENST00000479795 MYT1Q01538 1121 aa26.48■■□□□ 1.83
TNXB-204ENST00000479795 CLIP1P30622 1438 aa26.47■■□□□ 1.83
TNXB-204ENST00000479795 TOP2BQ02880 1626 aa26.44■■□□□ 1.82
TNXB-204ENST00000479795 NCAPD3P42695 1498 aa26.43■■□□□ 1.82
TNXB-204ENST00000479795 HMGXB3Q12766 1538 aa26.37■■□□□ 1.81
TNXB-204ENST00000479795 BIVM-ERCC5R4GMW8 1640 aa26.31■■□□□ 1.8
TNXB-204ENST00000479795 HNRNPUL2Q1KMD3 747 aaKnown RBP26.3■■□□□ 1.8
TNXB-204ENST00000479795 VPS8Q8N3P4 1428 aa26.29■■□□□ 1.8
TNXB-204ENST00000479795 APLP2Q06481 763 aa26.27■■□□□ 1.8
TNXB-204ENST00000479795 CUX1P39880 1505 aa26.27■■□□□ 1.8
TNXB-204ENST00000479795 CFTRP13569 1480 aa26.2■■□□□ 1.78
TNXB-204ENST00000479795 PRXQ9BXM0 1461 aa26.16■■□□□ 1.78
TNXB-204ENST00000479795 KIF27Q86VH2 1401 aa26.11■■□□□ 1.77
TNXB-204ENST00000479795 ERICH3Q5RHP9 1530 aa26.09■■□□□ 1.77
TNXB-204ENST00000479795 DIEXFQ68CQ4 756 aaKnown RBP26.06■■□□□ 1.76
TNXB-204ENST00000479795 ARAP1Q96P48 1450 aa26.03■■□□□ 1.76
TNXB-204ENST00000479795 ACIN1Q9UKV3 1341 aaKnown RBP26.01■■□□□ 1.75
TNXB-204ENST00000479795 KANK4Q5T7N3 995 aaPredicted RBP25.99■■□□□ 1.75
TNXB-204ENST00000479795 CADPSQ9ULU8 1353 aa25.98■■□□□ 1.75
TNXB-204ENST00000479795 NEUROD1Q13562 356 aa25.96■■□□□ 1.75
TNXB-204ENST00000479795 CUX2O14529 1486 aa25.94■■□□□ 1.74
TNXB-204ENST00000479795 CC2D2AQ9P2K1 1620 aa25.89■■□□□ 1.74
TNXB-204ENST00000479795 PRDM2Q13029 1718 aa25.88■■□□□ 1.73
TNXB-204ENST00000479795 ZNF316A6NFI3 1004 aaPredicted RBP25.87■■□□□ 1.73
TNXB-204ENST00000479795 IGF1RP08069 1367 aa25.87■■□□□ 1.73
TNXB-204ENST00000479795 GTF3C3Q9Y5Q9 886 aa25.85■■□□□ 1.73
TNXB-204ENST00000479795 ARHGAP35Q9NRY4 1499 aa25.84■■□□□ 1.73
TNXB-204ENST00000479795 FGD5Q6ZNL6 1462 aa25.84■■□□□ 1.73
TNXB-204ENST00000479795 CARMIL1Q5VZK9 1371 aa25.76■■□□□ 1.71
TNXB-204ENST00000479795 FANCD2Q9BXW9 1451 aa25.74■■□□□ 1.71
TNXB-204ENST00000479795 ITGAEP38570 1179 aa25.71■■□□□ 1.71
TNXB-204ENST00000479795 NESP48681 1621 aa25.68■■□□□ 1.7
TNXB-204ENST00000479795 P3H3Q8IVL6 736 aa25.67■■□□□ 1.7
TNXB-204ENST00000479795 RAD54L2Q9Y4B4 1467 aa25.65■■□□□ 1.7
TNXB-204ENST00000479795 DHX57Q6P158 1386 aaKnown RBP25.63■■□□□ 1.69
TNXB-204ENST00000479795 RRBP1Q9P2E9 1410 aaKnown RBP25.63■■□□□ 1.69
TNXB-204ENST00000479795 CCNB3Q8WWL7 1395 aa25.6■■□□□ 1.69
TNXB-204ENST00000479795 CENPBP07199 599 aaPredicted RBP25.59■■□□□ 1.69
TNXB-204ENST00000479795 ATP1B4Q9UN42 357 aaPredicted RBP25.59■■□□□ 1.69
TNXB-204ENST00000479795 MIER1Q8N108 512 aa25.55■■□□□ 1.68
TNXB-204ENST00000479795 YTHDC1Q96MU7 727 aaKnown RBP25.55■■□□□ 1.68
TNXB-204ENST00000479795 TOPBP1Q92547 1522 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms