RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 PLB1Q6P1J6 1458 aa15.21■□□□□ 0.03
VPS52-217ENST00000478934 WASHC2AQ641Q2 1341 aa15.21■□□□□ 0.03
VPS52-217ENST00000478934 DAPK1P53355 1430 aa15.2■□□□□ 0.02
VPS52-217ENST00000478934 C11orf95C9JLR9 678 aaPredicted RBP15.2■□□□□ 0.02
VPS52-217ENST00000478934 TSHZ2Q9NRE2 1034 aa15.19■□□□□ 0.02
VPS52-217ENST00000478934 GCC2Q8IWJ2 1684 aa15.18■□□□□ 0.02
VPS52-217ENST00000478934 CCER2I3L3R5 266 aa15.18■□□□□ 0.02
VPS52-217ENST00000478934 NBPF8Q3BBV2 869 aa15.18■□□□□ 0.02
VPS52-217ENST00000478934 SLC4A1APQ9BWU0 796 aaKnown RBP15.17■□□□□ 0.02
VPS52-217ENST00000478934 CFDP1Q9UEE9 299 aaPredicted RBP15.17■□□□□ 0.02
VPS52-217ENST00000478934 JPH4Q96JJ6 628 aa15.16■□□□□ 0.02
VPS52-217ENST00000478934 CDK11AQ9UQ88 783 aaPredicted RBP15.16■□□□□ 0.02
VPS52-217ENST00000478934 CEP170Q5SW79 1584 aa15.15■□□□□ 0.02
VPS52-217ENST00000478934 RAPGEF6Q8TEU7 1601 aa15.15■□□□□ 0.02
VPS52-217ENST00000478934 AKNAQ7Z591 1439 aa15.15■□□□□ 0.02
VPS52-217ENST00000478934 EIF4G2P78344 907 aaKnown RBP eCLIP15.14■□□□□ 0.011e-12■■■■□ 25
VPS52-217ENST00000478934 ANKRD30BQ9BXX2 1392 aa15.14■□□□□ 0.01
VPS52-217ENST00000478934 CCDC184Q52MB2 194 aa15.13■□□□□ 0.01
VPS52-217ENST00000478934 TROQ12816 1431 aaPredicted RBP15.11■□□□□ 0.01
VPS52-217ENST00000478934 KIF14Q15058 1648 aa15.1■□□□□ 0.01
VPS52-217ENST00000478934 ROCK1Q13464 1354 aa15.1■□□□□ 0.01
VPS52-217ENST00000478934 SYNJ2O15056 1496 aa15.1■□□□□ 0.01
VPS52-217ENST00000478934 CNGB1Q14028 1251 aaPredicted RBP15.1■□□□□ 0.01
VPS52-217ENST00000478934 DNMT1P26358 1616 aaKnown RBP15.1■□□□□ 0.01
VPS52-217ENST00000478934 GPATCH8Q9UKJ3 1502 aaKnown RBP15.09■□□□□ 0.01
VPS52-217ENST00000478934 CAMSAP2Q08AD1 1489 aa15.09■□□□□ 0.01
VPS52-217ENST00000478934 ZNF326Q5BKZ1 582 aaKnown RBP15.09■□□□□ 0.01
VPS52-217ENST00000478934 HNRNPUQ00839 825 aaKnown RBP eCLIP15.08■□□□□ 0
VPS52-217ENST00000478934 MAGI1Q96QZ7 1491 aaPredicted RBP15.08■□□□□ 0
VPS52-217ENST00000478934 IRX6P78412 446 aaPredicted RBP15.07■□□□□ 0
VPS52-217ENST00000478934 NCOA1Q15788 1441 aa15.06■□□□□ 0
VPS52-217ENST00000478934 RPRD2Q5VT52 1461 aaKnown RBP15.06■□□□□ 0
VPS52-217ENST00000478934 PKD2Q13563 968 aa15.05■□□□□ 0
VPS52-217ENST00000478934 PZPP20742 1482 aa15.05■□□□□ -0
VPS52-217ENST00000478934 TEX14Q8IWB6 1497 aa15.04■□□□□ -0
VPS52-217ENST00000478934 PLEKHD1A6NEE1 506 aa15.04■□□□□ -0
VPS52-217ENST00000478934 NEFLP07196 543 aa15.04■□□□□ -0
VPS52-217ENST00000478934 CCDC7Q96M83 1385 aa15.03■□□□□ -0
VPS52-217ENST00000478934 NUP160Q12769 1436 aa15.03■□□□□ -0
VPS52-217ENST00000478934 CARMIL2Q6F5E8 1435 aa15.03■□□□□ -0
VPS52-217ENST00000478934 POLR3GLQ9BT43 218 aa15.03■□□□□ -0
VPS52-217ENST00000478934 HNRNPMP52272 730 aaKnown RBP eCLIP15.02■□□□□ -0
VPS52-217ENST00000478934 KIF7Q2M1P5 1343 aa15.01□□□□□ -0.01
VPS52-217ENST00000478934 ATP10BO94823 1461 aa15.01□□□□□ -0.01
VPS52-217ENST00000478934 FAM9BQ8IZU0 186 aa15□□□□□ -0.01
VPS52-217ENST00000478934 CNTLNQ9NXG0 1405 aa15□□□□□ -0.01
VPS52-217ENST00000478934 PRKRIP1Q9H875 184 aaPredicted RBP14.99□□□□□ -0.01
VPS52-217ENST00000478934 SENP3-EIF4A1A0A087X0R7 540 aa14.98□□□□□ -0.01
VPS52-217ENST00000478934 SPATA31E1Q6ZUB1 1445 aa14.97□□□□□ -0.01
VPS52-217ENST00000478934 ANKRD50Q9ULJ7 1429 aa14.97□□□□□ -0.01
VPS52-217ENST00000478934 NUP155O75694 1391 aa14.97□□□□□ -0.01
VPS52-217ENST00000478934 ANKRD30AQ9BXX3 1397 aa14.97□□□□□ -0.01
VPS52-217ENST00000478934 KDM2AQ9Y2K7 1162 aa14.96□□□□□ -0.01
VPS52-217ENST00000478934 MRS2Q9HD23 443 aa14.96□□□□□ -0.02
VPS52-217ENST00000478934 KIAA1107Q9UPP5 1409 aa14.95□□□□□ -0.02
VPS52-217ENST00000478934 ABCC10Q5T3U5 1492 aa14.94□□□□□ -0.02
VPS52-217ENST00000478934 ABCA8O94911 1581 aa14.94□□□□□ -0.02
VPS52-217ENST00000478934 MYT1Q01538 1121 aa14.94□□□□□ -0.02
VPS52-217ENST00000478934 C9orf84Q5VXU9 1444 aa14.93□□□□□ -0.02
VPS52-217ENST00000478934 TSPY4P0CV99 314 aa14.93□□□□□ -0.02
VPS52-217ENST00000478934 TSPY10P0CW01 314 aa14.93□□□□□ -0.02
VPS52-217ENST00000478934 ITSN2Q9NZM3 1697 aa14.93□□□□□ -0.02
VPS52-217ENST00000478934 PTPRGP23470 1445 aa14.92□□□□□ -0.02
VPS52-217ENST00000478934 ADGRL2O95490 1459 aa14.92□□□□□ -0.02
VPS52-217ENST00000478934 ADCY10Q96PN6 1610 aa14.92□□□□□ -0.02
VPS52-217ENST00000478934 CDC42BPAQ5VT25 1732 aa14.91□□□□□ -0.02
VPS52-217ENST00000478934 USP47Q96K76 1375 aa14.9□□□□□ -0.02
VPS52-217ENST00000478934 RBM19Q9Y4C8 960 aaKnown RBP14.9□□□□□ -0.02
VPS52-217ENST00000478934 ADGBQ8N7X0 1667 aa14.9□□□□□ -0.02
VPS52-217ENST00000478934 KIF15Q9NS87 1388 aa14.89□□□□□ -0.03
VPS52-217ENST00000478934 CROCC2H7BZ55 1655 aa14.89□□□□□ -0.03
VPS52-217ENST00000478934 MBD5Q9P267 1494 aa14.88□□□□□ -0.03
VPS52-217ENST00000478934 DCAF11Q8TEB1 546 aa14.88□□□□□ -0.03
VPS52-217ENST00000478934 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.87□□□□□ -0.033e-6■■□□□ 11.4
VPS52-217ENST00000478934 BCORL1Q5H9F3 1711 aa14.86□□□□□ -0.03
VPS52-217ENST00000478934 CARD11Q9BXL7 1154 aa14.86□□□□□ -0.03
VPS52-217ENST00000478934 DHX29Q7Z478 1369 aaKnown RBP14.84□□□□□ -0.03
VPS52-217ENST00000478934 RGL3Q3MIN7 710 aa14.84□□□□□ -0.03
VPS52-217ENST00000478934 ST20-MTHFSA0A0A6YYL1 179 aa14.84□□□□□ -0.03
VPS52-217ENST00000478934 ANP32EQ9BTT0 268 aa14.83□□□□□ -0.04
VPS52-217ENST00000478934 ERCC6L2Q5T890 1561 aa14.82□□□□□ -0.04
VPS52-217ENST00000478934 SAMD9LQ8IVG5 1584 aa14.8□□□□□ -0.04
VPS52-217ENST00000478934 SHANK2Q9UPX8 1470 aa14.8□□□□□ -0.04
VPS52-217ENST00000478934 NBPF1Q3BBV0 1214 aa14.79□□□□□ -0.04
VPS52-217ENST00000478934 KDM5CP41229 1560 aa14.78□□□□□ -0.04
VPS52-217ENST00000478934 CDC42BPBQ9Y5S2 1711 aa14.78□□□□□ -0.04
VPS52-217ENST00000478934 ZBED9Q6R2W3 1325 aa14.77□□□□□ -0.05
VPS52-217ENST00000478934 CCDC141Q6ZP82 1450 aa14.77□□□□□ -0.05
VPS52-217ENST00000478934 SYCP2Q9BX26 1530 aa14.77□□□□□ -0.05
VPS52-217ENST00000478934 CHD1O14646 1710 aa14.76□□□□□ -0.05
VPS52-217ENST00000478934 B4GALNT3Q6L9W6 998 aa14.76□□□□□ -0.05
VPS52-217ENST00000478934 UHRF1BP1Q6BDS2 1440 aa14.76□□□□□ -0.05
VPS52-217ENST00000478934 TTC37Q6PGP7 1564 aa14.76□□□□□ -0.05
VPS52-217ENST00000478934 RALGAPBQ86X10 1494 aa14.75□□□□□ -0.05
VPS52-217ENST00000478934 ARHGAP5Q13017 1502 aa14.75□□□□□ -0.05
VPS52-217ENST00000478934 FAM135AQ9P2D6 1515 aa14.75□□□□□ -0.05
VPS52-217ENST00000478934 ROCK2O75116 1388 aaKnown RBP14.74□□□□□ -0.05
VPS52-217ENST00000478934 ARHGEF5Q12774 1597 aa14.73□□□□□ -0.05
VPS52-217ENST00000478934 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.73□□□□□ -0.05
VPS52-217ENST00000478934 MSH5O43196 834 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms