RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 OSCARQ8IYS5 282 aa24.27■■□□□ 1.48
CCM2-207ENST00000475551 PRKRIP1Q9H875 184 aaPredicted RBP24.25■■□□□ 1.47
CCM2-207ENST00000475551 CLASP1Q7Z460 1538 aa24.24■■□□□ 1.47
CCM2-207ENST00000475551 MTUS2Q5JR59 1369 aa24.23■■□□□ 1.47
CCM2-207ENST00000475551 JPH4Q96JJ6 628 aa24.22■■□□□ 1.47
CCM2-207ENST00000475551 MYOM3Q5VTT5 1437 aa24.22■■□□□ 1.47
CCM2-207ENST00000475551 NCOA1Q15788 1441 aa24.21■■□□□ 1.47
CCM2-207ENST00000475551 FAM9BQ8IZU0 186 aa24.19■■□□□ 1.46
CCM2-207ENST00000475551 MRS2Q9HD23 443 aa24.19■■□□□ 1.46
CCM2-207ENST00000475551 CCDC7Q96M83 1385 aa24.19■■□□□ 1.46
CCM2-207ENST00000475551 UGGT2Q9NYU1 1516 aa24.18■■□□□ 1.46
CCM2-207ENST00000475551 HECW1Q76N89 1606 aa24.18■■□□□ 1.46
CCM2-207ENST00000475551 DENND4BO75064 1496 aaPredicted RBP24.16■■□□□ 1.46
CCM2-207ENST00000475551 PAK3O75914 559 aaPredicted RBP24.16■■□□□ 1.46
CCM2-207ENST00000475551 SAMD9Q5K651 1589 aa24.13■■□□□ 1.45
CCM2-207ENST00000475551 SHROOM2Q13796 1616 aa24.13■■□□□ 1.45
CCM2-207ENST00000475551 SMG6Q86US8 1419 aaKnown RBP24.12■■□□□ 1.45
CCM2-207ENST00000475551 C11orf95C9JLR9 678 aaPredicted RBP24.12■■□□□ 1.45
CCM2-207ENST00000475551 DISP1Q96F81 1524 aa24.12■■□□□ 1.45
CCM2-207ENST00000475551 SUPT6HQ7KZ85 1726 aaKnown RBP24.12■■□□□ 1.45
CCM2-207ENST00000475551 NBR1Q14596 966 aa24.11■■□□□ 1.45
CCM2-207ENST00000475551 GCC2Q8IWJ2 1684 aa24.11■■□□□ 1.45
CCM2-207ENST00000475551 PRG4Q92954 1404 aaPredicted RBP24.11■■□□□ 1.45
CCM2-207ENST00000475551 AKNAQ7Z591 1439 aa24.1■■□□□ 1.45
CCM2-207ENST00000475551 EHBP1L1Q8N3D4 1523 aa24.09■■□□□ 1.45
CCM2-207ENST00000475551 IPO9Q96P70 1041 aaKnown RBP24.09■■□□□ 1.45
CCM2-207ENST00000475551 KIAA0556O60303 1618 aa24.08■■□□□ 1.45
CCM2-207ENST00000475551 RNF123Q5XPI4 1314 aa24.08■■□□□ 1.45
CCM2-207ENST00000475551 LRRIQ1Q96JM4 1722 aa24.08■■□□□ 1.45
CCM2-207ENST00000475551 ANP32AP39687 249 aaKnown RBP24.07■■□□□ 1.44
CCM2-207ENST00000475551 ERCC6L2Q5T890 1561 aa24.07■■□□□ 1.44
CCM2-207ENST00000475551 ARHGEF11O15085 1522 aa24.06■■□□□ 1.44
CCM2-207ENST00000475551 TCOF1Q13428 1488 aaKnown RBP24.06■■□□□ 1.44
CCM2-207ENST00000475551 L3MBTL2Q969R5 705 aa24.05■■□□□ 1.44
CCM2-207ENST00000475551 CARMIL2Q6F5E8 1435 aa24.05■■□□□ 1.44
CCM2-207ENST00000475551 POLR1AO95602 1720 aaPredicted RBP24.03■■□□□ 1.44
CCM2-207ENST00000475551 RRP7BPQ9NSQ0 103 aa24.02■■□□□ 1.44
CCM2-207ENST00000475551 NUDCQ9Y266 331 aa24.02■■□□□ 1.44
CCM2-207ENST00000475551 PRKCSHP14314 528 aaPredicted RBP24.01■■□□□ 1.43
CCM2-207ENST00000475551 MPHOSPH9Q99550 1183 aa24.01■■□□□ 1.43
CCM2-207ENST00000475551 SPATA31E1Q6ZUB1 1445 aa24.01■■□□□ 1.43
CCM2-207ENST00000475551 RTL5Q5HYW3 569 aaPredicted RBP24■■□□□ 1.43
CCM2-207ENST00000475551 CCDC136Q96JN2 1154 aa24■■□□□ 1.43
CCM2-207ENST00000475551 KIF7Q2M1P5 1343 aa23.99■■□□□ 1.43
CCM2-207ENST00000475551 ZBTB47Q9UFB7 747 aaPredicted RBP23.99■■□□□ 1.43
CCM2-207ENST00000475551 KDM6BO15054 1643 aa23.96■■□□□ 1.43
CCM2-207ENST00000475551 RPRD2Q5VT52 1461 aaKnown RBP23.95■■□□□ 1.42
CCM2-207ENST00000475551 NBPF8Q3BBV2 869 aa23.93■■□□□ 1.42
CCM2-207ENST00000475551 CHIC2Q9UKJ5 165 aa23.93■■□□□ 1.42
CCM2-207ENST00000475551 TEX14Q8IWB6 1497 aa23.93■■□□□ 1.42
CCM2-207ENST00000475551 ANKRD30BQ9BXX2 1392 aa23.91■■□□□ 1.42
CCM2-207ENST00000475551 MAGI3Q5TCQ9 1506 aa23.91■■□□□ 1.42
CCM2-207ENST00000475551 PTPRGP23470 1445 aa23.89■■□□□ 1.41
CCM2-207ENST00000475551 DHX29Q7Z478 1369 aaKnown RBP23.89■■□□□ 1.41
CCM2-207ENST00000475551 MIA2Q96PC5 1412 aa23.87■■□□□ 1.41
CCM2-207ENST00000475551 PLB1Q6P1J6 1458 aa23.84■■□□□ 1.41
CCM2-207ENST00000475551 FOXD1Q16676 465 aa23.84■■□□□ 1.41
CCM2-207ENST00000475551 RIMBP3CA6NJZ7 1639 aa23.82■■□□□ 1.4
CCM2-207ENST00000475551 RIMBP3BA6NNM3 1639 aa23.82■■□□□ 1.4
CCM2-207ENST00000475551 RIMBP3Q9UFD9 1639 aa23.82■■□□□ 1.4
CCM2-207ENST00000475551 ANO8Q9HCE9 1232 aaPredicted RBP23.8■■□□□ 1.4
CCM2-207ENST00000475551 ROCK1Q13464 1354 aa23.79■■□□□ 1.4
CCM2-207ENST00000475551 USP35Q9P2H5 1018 aa23.79■■□□□ 1.4
CCM2-207ENST00000475551 RAPGEF6Q8TEU7 1601 aa23.78■■□□□ 1.4
CCM2-207ENST00000475551 ARID3CA6NKF2 412 aa23.78■■□□□ 1.4
CCM2-207ENST00000475551 ARID4BQ4LE39 1312 aaPredicted RBP23.77■■□□□ 1.4
CCM2-207ENST00000475551 PNISRQ8TF01 805 aaKnown RBP23.77■■□□□ 1.4
CCM2-207ENST00000475551 ABCA8O94911 1581 aa23.77■■□□□ 1.4
CCM2-207ENST00000475551 TCERG1O14776 1098 aaKnown RBP23.76■■□□□ 1.39
CCM2-207ENST00000475551 NUP153P49790 1475 aaKnown RBP23.72■■□□□ 1.39
CCM2-207ENST00000475551 BCORL1Q5H9F3 1711 aa23.71■■□□□ 1.39
CCM2-207ENST00000475551 MBD5Q9P267 1494 aa23.71■■□□□ 1.39
CCM2-207ENST00000475551 IL27Q8NEV9 243 aa23.71■■□□□ 1.39
CCM2-207ENST00000475551 EPRSP07814 1512 aaKnown RBP23.71■■□□□ 1.39
CCM2-207ENST00000475551 CYB5RLQ6IPT4 315 aa23.7■■□□□ 1.38
CCM2-207ENST00000475551 SALL2Q9Y467 1007 aaPredicted RBP23.7■■□□□ 1.38
CCM2-207ENST00000475551 DAPK1P53355 1430 aa23.7■■□□□ 1.38
CCM2-207ENST00000475551 LRPPRCP42704 1394 aaKnown RBP23.69■■□□□ 1.38
CCM2-207ENST00000475551 USP47Q96K76 1375 aa23.69■■□□□ 1.38
CCM2-207ENST00000475551 RRP1P56182 461 aaKnown RBP23.69■■□□□ 1.38
CCM2-207ENST00000475551 ROCK2O75116 1388 aaKnown RBP23.68■■□□□ 1.38
CCM2-207ENST00000475551 MS4A1P11836 297 aa23.68■■□□□ 1.38
CCM2-207ENST00000475551 SLC4A1APQ9BWU0 796 aaKnown RBP23.68■■□□□ 1.38
CCM2-207ENST00000475551 ABCC2Q92887 1545 aa23.68■■□□□ 1.38
CCM2-207ENST00000475551 CDK13Q14004 1512 aaKnown RBP23.67■■□□□ 1.38
CCM2-207ENST00000475551 PDE4AP27815 886 aa23.67■■□□□ 1.38
CCM2-207ENST00000475551 TMC1Q8TDI8 760 aa23.67■■□□□ 1.38
CCM2-207ENST00000475551 WASHC2CQ9Y4E1 1318 aa23.67■■□□□ 1.38
CCM2-207ENST00000475551 NEFMP07197 916 aa23.66■■□□□ 1.38
CCM2-207ENST00000475551 PPM1GO15355 546 aaPredicted RBP23.66■■□□□ 1.38
CCM2-207ENST00000475551 BACH2Q9BYV9 841 aa23.66■■□□□ 1.38
CCM2-207ENST00000475551 DNMT1P26358 1616 aaKnown RBP23.65■■□□□ 1.38
CCM2-207ENST00000475551 ADCY10Q96PN6 1610 aa23.65■■□□□ 1.38
CCM2-207ENST00000475551 NPM2Q86SE8 214 aaKnown RBP23.64■■□□□ 1.37
CCM2-207ENST00000475551 KDM5CP41229 1560 aa23.64■■□□□ 1.37
CCM2-207ENST00000475551 ABCC5O15440 1437 aa23.64■■□□□ 1.37
CCM2-207ENST00000475551 UHRF1BP1LA0JNW5 1464 aa23.63■■□□□ 1.37
CCM2-207ENST00000475551 EXOC6Q8TAG9 804 aa23.62■■□□□ 1.37
CCM2-207ENST00000475551 KIF14Q15058 1648 aa23.62■■□□□ 1.37
CCM2-207ENST00000475551 DNAJC5Q9H3Z4 198 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms