RNA–Protein interactions for RNA: ENST00000475309.5

WIPI2-208, Transcript of WD repeat domain, phosphoinositide interacting 2, humanhuman

TSL 1 (best)

Gene WIPI2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WIPI2-208ENST00000475309 RAPGEF2Q9Y4G8 1499 aa13.88□□□□□ -0.19
WIPI2-208ENST00000475309 HNRNPUQ00839 825 aaKnown RBP eCLIP13.87□□□□□ -0.19
WIPI2-208ENST00000475309 SAMD1Q6SPF0 538 aaPredicted RBP13.87□□□□□ -0.19
WIPI2-208ENST00000475309 BRD2P25440 801 aaKnown RBP13.86□□□□□ -0.19
WIPI2-208ENST00000475309 CCNB3Q8WWL7 1395 aa13.86□□□□□ -0.19
WIPI2-208ENST00000475309 DHX37Q8IY37 1157 aaKnown RBP13.84□□□□□ -0.19
WIPI2-208ENST00000475309 PBRM1Q86U86 1689 aa13.84□□□□□ -0.19
WIPI2-208ENST00000475309 RAB3GAP2Q9H2M9 1393 aa13.83□□□□□ -0.19
WIPI2-208ENST00000475309 ERCC6L2Q5T890 1561 aa13.83□□□□□ -0.2
WIPI2-208ENST00000475309 KIF27Q86VH2 1401 aa13.83□□□□□ -0.2
WIPI2-208ENST00000475309 RSPH6AQ9H0K4 717 aa13.82□□□□□ -0.2
WIPI2-208ENST00000475309 B4GALNT3Q6L9W6 998 aa13.81□□□□□ -0.2
WIPI2-208ENST00000475309 SHROOM2Q13796 1616 aa13.8□□□□□ -0.2
WIPI2-208ENST00000475309 BCL11BQ9C0K0 894 aaPredicted RBP13.8□□□□□ -0.2
WIPI2-208ENST00000475309 GLIPR1L2Q4G1C9 344 aa13.79□□□□□ -0.2
WIPI2-208ENST00000475309 CEP170Q5SW79 1584 aa13.79□□□□□ -0.2
WIPI2-208ENST00000475309 CNKSR2Q8WXI2 1034 aa13.78□□□□□ -0.2
WIPI2-208ENST00000475309 ABCA5Q8WWZ7 1642 aa13.78□□□□□ -0.2
WIPI2-208ENST00000475309 PPM1GO15355 546 aaPredicted RBP13.78□□□□□ -0.2
WIPI2-208ENST00000475309 SETD5Q9C0A6 1442 aa13.78□□□□□ -0.2
WIPI2-208ENST00000475309 ERICH3Q5RHP9 1530 aa13.78□□□□□ -0.2
WIPI2-208ENST00000475309 IGF1RP08069 1367 aa13.77□□□□□ -0.2
WIPI2-208ENST00000475309 ABCC10Q5T3U5 1492 aa13.76□□□□□ -0.21
WIPI2-208ENST00000475309 KDM6BO15054 1643 aa13.76□□□□□ -0.21
WIPI2-208ENST00000475309 CDK11BP21127 795 aaKnown RBP13.76□□□□□ -0.21
WIPI2-208ENST00000475309 NEFMP07197 916 aa13.76□□□□□ -0.21
WIPI2-208ENST00000475309 FGD1P98174 961 aa13.76□□□□□ -0.21
WIPI2-208ENST00000475309 PRXQ9BXM0 1461 aa13.75□□□□□ -0.21
WIPI2-208ENST00000475309 ZBED9Q6R2W3 1325 aa13.73□□□□□ -0.21
WIPI2-208ENST00000475309 KANK4Q5T7N3 995 aaPredicted RBP13.73□□□□□ -0.21
WIPI2-208ENST00000475309 DIP2BQ9P265 1576 aa13.72□□□□□ -0.21
WIPI2-208ENST00000475309 NUP160Q12769 1436 aa13.72□□□□□ -0.21
WIPI2-208ENST00000475309 CARMIL1Q5VZK9 1371 aa13.71□□□□□ -0.22
WIPI2-208ENST00000475309 GRIN2AQ12879 1464 aa13.7□□□□□ -0.22
WIPI2-208ENST00000475309 GSE1Q14687 1217 aa13.69□□□□□ -0.22
WIPI2-208ENST00000475309 FHAD1B1AJZ9 1412 aa13.69□□□□□ -0.22
WIPI2-208ENST00000475309 HECW2Q9P2P5 1572 aa13.69□□□□□ -0.22
WIPI2-208ENST00000475309 FAM43AQ8N2R8 423 aa13.69□□□□□ -0.22
WIPI2-208ENST00000475309 BRPF3Q9ULD4 1205 aa13.68□□□□□ -0.22
WIPI2-208ENST00000475309 MAP3K1Q13233 1512 aa13.67□□□□□ -0.22
WIPI2-208ENST00000475309 SIN3AQ96ST3 1273 aa13.67□□□□□ -0.22
WIPI2-208ENST00000475309 ADAMTS12P58397 1594 aa13.67□□□□□ -0.22
WIPI2-208ENST00000475309 FAM69CQ0P6D2 419 aa13.67□□□□□ -0.22
WIPI2-208ENST00000475309 SMG6Q86US8 1419 aaKnown RBP13.65□□□□□ -0.23
WIPI2-208ENST00000475309 HIRIP3Q9BW71 556 aaPredicted RBP13.64□□□□□ -0.23
WIPI2-208ENST00000475309 NCOA2Q15596 1464 aa13.64□□□□□ -0.23
WIPI2-208ENST00000475309 RNF123Q5XPI4 1314 aa13.64□□□□□ -0.23
WIPI2-208ENST00000475309 ADGRL1O94910 1474 aa13.63□□□□□ -0.23
WIPI2-208ENST00000475309 FBXO41Q8TF61 875 aa13.63□□□□□ -0.23
WIPI2-208ENST00000475309 LAS1LQ9Y4W2 734 aaKnown RBP13.62□□□□□ -0.23
WIPI2-208ENST00000475309 TONSLQ96HA7 1378 aa13.62□□□□□ -0.23
WIPI2-208ENST00000475309 CNTLNQ9NXG0 1405 aa13.61□□□□□ -0.23
WIPI2-208ENST00000475309 TIAM1Q13009 1591 aa13.6□□□□□ -0.23
WIPI2-208ENST00000475309 TCERG1O14776 1098 aaKnown RBP13.6□□□□□ -0.23
WIPI2-208ENST00000475309 DDRGK1Q96HY6 314 aa13.6□□□□□ -0.23
WIPI2-208ENST00000475309 JPH4Q96JJ6 628 aa13.6□□□□□ -0.23
WIPI2-208ENST00000475309 TSPOAP1O95153 1857 aa13.6□□□□□ -0.23
WIPI2-208ENST00000475309 CUL7Q14999 1698 aa13.59□□□□□ -0.23
WIPI2-208ENST00000475309 POLR1AO95602 1720 aaPredicted RBP13.59□□□□□ -0.23
WIPI2-208ENST00000475309 P3H3Q8IVL6 736 aa13.58□□□□□ -0.24
WIPI2-208ENST00000475309 ADCY10Q96PN6 1610 aa13.57□□□□□ -0.24
WIPI2-208ENST00000475309 MS4A1P11836 297 aa13.57□□□□□ -0.24
WIPI2-208ENST00000475309 HSP90B1P14625 803 aaKnown RBP13.57□□□□□ -0.24
WIPI2-208ENST00000475309 PRG4Q92954 1404 aaPredicted RBP13.57□□□□□ -0.24
WIPI2-208ENST00000475309 NPM1P06748 294 aaKnown RBP eCLIP13.55□□□□□ -0.24
WIPI2-208ENST00000475309 ZMYND15Q9H091 742 aa13.55□□□□□ -0.24
WIPI2-208ENST00000475309 AKNAQ7Z591 1439 aa13.54□□□□□ -0.24
WIPI2-208ENST00000475309 NUDCQ9Y266 331 aa13.54□□□□□ -0.24
WIPI2-208ENST00000475309 ARHGAP35Q9NRY4 1499 aa13.54□□□□□ -0.24
WIPI2-208ENST00000475309 FRAT1Q92837 279 aaPredicted RBP13.53□□□□□ -0.24
WIPI2-208ENST00000475309 PPRC1Q5VV67 1664 aaKnown RBP13.53□□□□□ -0.24
WIPI2-208ENST00000475309 CFAP43Q8NDM7 1665 aa13.53□□□□□ -0.24
WIPI2-208ENST00000475309 NFKBIBQ15653 356 aa13.52□□□□□ -0.24
WIPI2-208ENST00000475309 PDE4AP27815 886 aa13.52□□□□□ -0.25
WIPI2-208ENST00000475309 VSIG10Q8N0Z9 540 aa13.52□□□□□ -0.25
WIPI2-208ENST00000475309 BACH2Q9BYV9 841 aa13.52□□□□□ -0.25
WIPI2-208ENST00000475309 PRKRIP1Q9H875 184 aaPredicted RBP13.51□□□□□ -0.25
WIPI2-208ENST00000475309 MRS2Q9HD23 443 aa13.51□□□□□ -0.25
WIPI2-208ENST00000475309 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.51□□□□□ -0.25
WIPI2-208ENST00000475309 FAM9BQ8IZU0 186 aa13.51□□□□□ -0.25
WIPI2-208ENST00000475309 KDM5BQ9UGL1 1544 aa13.5□□□□□ -0.25
WIPI2-208ENST00000475309 ATP1B4Q9UN42 357 aaPredicted RBP13.5□□□□□ -0.25
WIPI2-208ENST00000475309 GLI2P10070 1586 aa13.5□□□□□ -0.25
WIPI2-208ENST00000475309 LRRC9Q6ZRR7 1453 aa13.5□□□□□ -0.25
WIPI2-208ENST00000475309 RRP9O43818 475 aaKnown RBP13.49□□□□□ -0.25
WIPI2-208ENST00000475309 IGSF3O75054 1194 aa13.49□□□□□ -0.25
WIPI2-208ENST00000475309 RSPH4AQ5TD94 716 aa13.49□□□□□ -0.25
WIPI2-208ENST00000475309 PPP6R1Q9UPN7 881 aa13.49□□□□□ -0.25
WIPI2-208ENST00000475309 ARID3CA6NKF2 412 aa13.48□□□□□ -0.25
WIPI2-208ENST00000475309 KIAA0586Q9BVV6 1533 aa13.47□□□□□ -0.25
WIPI2-208ENST00000475309 CCDC184Q52MB2 194 aa13.47□□□□□ -0.25
WIPI2-208ENST00000475309 SLC4A1APQ9BWU0 796 aaKnown RBP13.47□□□□□ -0.25
WIPI2-208ENST00000475309 UACAQ9BZF9 1416 aa13.46□□□□□ -0.25
WIPI2-208ENST00000475309 AAMPQ13685 434 aa13.45□□□□□ -0.26
WIPI2-208ENST00000475309 PHLDB1Q86UU1 1377 aa13.44□□□□□ -0.26
WIPI2-208ENST00000475309 PHF23Q9BUL5 403 aaPredicted RBP13.44□□□□□ -0.26
WIPI2-208ENST00000475309 NCOA1Q15788 1441 aa13.44□□□□□ -0.26
WIPI2-208ENST00000475309 HSP90AA2PQ14568 343 aaPredicted RBP13.44□□□□□ -0.26
WIPI2-208ENST00000475309 ZNF326Q5BKZ1 582 aaKnown RBP13.44□□□□□ -0.26
WIPI2-208ENST00000475309 CCDC18Q5T9S5 1454 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms