RNA–Protein interactions for RNA: ENST00000475087.5

COCH-205, Transcript of cochlin, humanhuman

TSL 1 (best) BASIC

Gene COCH, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-205ENST00000475087 ARAP3Q8WWN8 1544 aa32.23■■■□□ 2.75
COCH-205ENST00000475087 PTPN23Q9H3S7 1636 aa32.22■■■□□ 2.75
COCH-205ENST00000475087 TCOF1Q13428 1488 aaKnown RBP32.2■■■□□ 2.75
COCH-205ENST00000475087 ARHGAP5Q13017 1502 aa32.2■■■□□ 2.75
COCH-205ENST00000475087 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.2■■■□□ 2.758e-9■■■□□ 17.4
COCH-205ENST00000475087 MAP3K4Q9Y6R4 1608 aa32.19■■■□□ 2.74
COCH-205ENST00000475087 FAM50AQ14320 339 aaKnown RBP32.18■■■□□ 2.74
COCH-205ENST00000475087 EFCAB2Q5VUJ9 269 aa32.17■■■□□ 2.74
COCH-205ENST00000475087 ZNF777Q9ULD5 760 aaPredicted RBP32.17■■■□□ 2.74
COCH-205ENST00000475087 ZNF644Q9H582 1327 aaPredicted RBP32.17■■■□□ 2.74
COCH-205ENST00000475087 KIF13AQ9H1H9 1805 aa32.15■■■□□ 2.74
COCH-205ENST00000475087 CAMSAP2Q08AD1 1489 aa32.13■■■□□ 2.73
COCH-205ENST00000475087 FANCAO15360 1455 aa32.11■■■□□ 2.73
COCH-205ENST00000475087 SAMD9LQ8IVG5 1584 aa32.1■■■□□ 2.73
COCH-205ENST00000475087 PCGF6Q9BYE7 350 aa32.07■■■□□ 2.72
COCH-205ENST00000475087 PLEKHH2Q8IVE3 1493 aa32.04■■■□□ 2.72
COCH-205ENST00000475087 KIAA1107Q9UPP5 1409 aa32.03■■■□□ 2.72
COCH-205ENST00000475087 CFAP74Q9C0B2 1584 aa32.02■■■□□ 2.72
COCH-205ENST00000475087 AKNAQ7Z591 1439 aa32.01■■■□□ 2.71
COCH-205ENST00000475087 NEO1Q92859 1461 aa32■■■□□ 2.71
COCH-205ENST00000475087 MBD5Q9P267 1494 aa32■■■□□ 2.71
COCH-205ENST00000475087 ABCC1P33527 1531 aa32■■■□□ 2.71
COCH-205ENST00000475087 TRHP20396 242 aaPredicted RBP31.99■■■□□ 2.71
COCH-205ENST00000475087 HNRNPMP52272 730 aaKnown RBP eCLIP31.99■■■□□ 2.71
COCH-205ENST00000475087 PPRC1Q5VV67 1664 aaKnown RBP31.99■■■□□ 2.71
COCH-205ENST00000475087 ITGAEP38570 1179 aa31.99■■■□□ 2.71
COCH-205ENST00000475087 SYCP2Q9BX26 1530 aa31.97■■■□□ 2.71
COCH-205ENST00000475087 TSPOAP1O95153 1857 aa31.97■■■□□ 2.71
COCH-205ENST00000475087 DNMT1P26358 1616 aaKnown RBP31.97■■■□□ 2.71
COCH-205ENST00000475087 TEX14Q8IWB6 1497 aa31.96■■■□□ 2.71
COCH-205ENST00000475087 ARHGEF12Q9NZN5 1544 aa31.96■■■□□ 2.71
COCH-205ENST00000475087 ABCC5O15440 1437 aa31.96■■■□□ 2.71
COCH-205ENST00000475087 RSPH4AQ5TD94 716 aa31.96■■■□□ 2.71
COCH-205ENST00000475087 DAPK1P53355 1430 aa31.95■■■□□ 2.71
COCH-205ENST00000475087 ADGRL1O94910 1474 aa31.95■■■□□ 2.71
COCH-205ENST00000475087 ARHGEF5Q12774 1597 aa31.95■■■□□ 2.71
COCH-205ENST00000475087 PTPRKQ15262 1439 aa31.92■■■□□ 2.7
COCH-205ENST00000475087 SCAPERQ9BY12 1400 aa31.92■■■□□ 2.7
COCH-205ENST00000475087 CCDC141Q6ZP82 1450 aa31.9■■■□□ 2.7
COCH-205ENST00000475087 TRAPPC8Q9Y2L5 1435 aa31.87■■■□□ 2.69
COCH-205ENST00000475087 CROCC2H7BZ55 1655 aa31.83■■■□□ 2.69
COCH-205ENST00000475087 TSPY4P0CV99 314 aa31.83■■■□□ 2.69
COCH-205ENST00000475087 TSPY10P0CW01 314 aa31.83■■■□□ 2.69
COCH-205ENST00000475087 SHANK2Q9UPX8 1470 aa31.82■■■□□ 2.69
COCH-205ENST00000475087 AFAP1Q8N556 730 aa31.81■■■□□ 2.68
COCH-205ENST00000475087 CHIC2Q9UKJ5 165 aa31.81■■■□□ 2.68
COCH-205ENST00000475087 DENND4BO75064 1496 aaPredicted RBP31.8■■■□□ 2.68
COCH-205ENST00000475087 C9orf84Q5VXU9 1444 aa31.79■■■□□ 2.68
COCH-205ENST00000475087 POGZQ7Z3K3 1410 aa31.79■■■□□ 2.68
COCH-205ENST00000475087 ZNF518AQ6AHZ1 1483 aa31.78■■■□□ 2.68
COCH-205ENST00000475087 ROCK1Q13464 1354 aa31.76■■■□□ 2.68
COCH-205ENST00000475087 MAST1Q9Y2H9 1570 aa31.76■■■□□ 2.67
COCH-205ENST00000475087 ADGRL2O95490 1459 aa31.75■■■□□ 2.67
COCH-205ENST00000475087 RAPGEF3O95398 923 aa31.73■■■□□ 2.67
COCH-205ENST00000475087 SPAG9O60271 1321 aaKnown RBP31.73■■■□□ 2.67
COCH-205ENST00000475087 KDM5CP41229 1560 aa31.72■■■□□ 2.67
COCH-205ENST00000475087 NCOA1Q15788 1441 aa31.72■■■□□ 2.67
COCH-205ENST00000475087 ADGBQ8N7X0 1667 aa31.71■■■□□ 2.67
COCH-205ENST00000475087 RTEL1-TNFRSF6BF6WH68 1400 aa31.71■■■□□ 2.67
COCH-205ENST00000475087 ANKRD30AQ9BXX3 1397 aa31.7■■■□□ 2.67
COCH-205ENST00000475087 RICTORQ6R327 1708 aa31.7■■■□□ 2.67
COCH-205ENST00000475087 RRP7BPQ9NSQ0 103 aa31.69■■■□□ 2.66
COCH-205ENST00000475087 HFM1A2PYH4 1435 aa31.69■■■□□ 2.66
COCH-205ENST00000475087 COL17A1Q9UMD9 1497 aaPredicted RBP31.69■■■□□ 2.66
COCH-205ENST00000475087 FRMPD1Q5SYB0 1578 aa31.66■■■□□ 2.66
COCH-205ENST00000475087 NAIPQ13075 1403 aa31.66■■■□□ 2.66
COCH-205ENST00000475087 ZFYVE16Q7Z3T8 1539 aa31.66■■■□□ 2.66
COCH-205ENST00000475087 INO80Q9ULG1 1556 aaPredicted RBP31.65■■■□□ 2.66
COCH-205ENST00000475087 MLH3Q9UHC1 1453 aa31.65■■■□□ 2.66
COCH-205ENST00000475087 ATP7AQ04656 1500 aa31.63■■■□□ 2.65
COCH-205ENST00000475087 SETD5Q9C0A6 1442 aa31.63■■■□□ 2.65
COCH-205ENST00000475087 PLXNC1O60486 1568 aa31.62■■■□□ 2.65
COCH-205ENST00000475087 HECW2Q9P2P5 1572 aa31.6■■■□□ 2.65
COCH-205ENST00000475087 KIF15Q9NS87 1388 aa31.6■■■□□ 2.65
COCH-205ENST00000475087 KIDINS220Q9ULH0 1771 aa31.59■■■□□ 2.65
COCH-205ENST00000475087 ZMYM4Q5VZL5 1548 aa31.59■■■□□ 2.65
COCH-205ENST00000475087 MYT1LQ9UL68 1186 aa31.59■■■□□ 2.65
COCH-205ENST00000475087 GCC2Q8IWJ2 1684 aa31.59■■■□□ 2.65
COCH-205ENST00000475087 RAB3GAP2Q9H2M9 1393 aa31.55■■■□□ 2.64
COCH-205ENST00000475087 MAGI2Q86UL8 1455 aa31.53■■■□□ 2.64
COCH-205ENST00000475087 KDM6BO15054 1643 aa31.53■■■□□ 2.64
COCH-205ENST00000475087 HRCP23327 699 aa31.51■■■□□ 2.63
COCH-205ENST00000475087 ANKRD50Q9ULJ7 1429 aa31.51■■■□□ 2.63
COCH-205ENST00000475087 DUOX2Q9NRD8 1548 aa31.5■■■□□ 2.63
COCH-205ENST00000475087 YEATS2Q9ULM3 1422 aa31.47■■■□□ 2.63
COCH-205ENST00000475087 ABCA6Q8N139 1617 aa31.47■■■□□ 2.63
COCH-205ENST00000475087 DIP2CQ9Y2E4 1556 aa31.45■■■□□ 2.62
COCH-205ENST00000475087 DHX29Q7Z478 1369 aaKnown RBP31.44■■■□□ 2.62
COCH-205ENST00000475087 ERBINQ96RT1 1412 aa31.43■■■□□ 2.62
COCH-205ENST00000475087 A2MP01023 1474 aa31.42■■■□□ 2.62
COCH-205ENST00000475087 ATP10AO60312 1499 aa31.37■■■□□ 2.61
COCH-205ENST00000475087 ACIN1Q9UKV3 1341 aaKnown RBP31.37■■■□□ 2.61
COCH-205ENST00000475087 ARHGEF40Q8TER5 1519 aa31.36■■■□□ 2.61
COCH-205ENST00000475087 EIF2AK4Q9P2K8 1649 aaKnown RBP31.32■■■□□ 2.6
COCH-205ENST00000475087 REREQ9P2R6 1566 aa31.31■■■□□ 2.6
COCH-205ENST00000475087 KIF3BO15066 747 aa31.28■■■□□ 2.6
COCH-205ENST00000475087 TRIM52Q96A61 297 aa31.28■■■□□ 2.6
COCH-205ENST00000475087 UNC13BO14795 1591 aa31.25■■■□□ 2.59
COCH-205ENST00000475087 BCORL1Q5H9F3 1711 aa31.24■■■□□ 2.59
COCH-205ENST00000475087 AGLP35573 1532 aa31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms