RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 FANCAO15360 1455 aa29.7■■■□□ 2.35
CTDSP1-207ENST00000473420 KDM6BO15054 1643 aa29.68■■■□□ 2.34
CTDSP1-207ENST00000473420 CCNB3Q8WWL7 1395 aa29.67■■■□□ 2.34
CTDSP1-207ENST00000473420 ARHGAP5Q13017 1502 aa29.67■■■□□ 2.34
CTDSP1-207ENST00000473420 GPATCH8Q9UKJ3 1502 aaKnown RBP29.67■■■□□ 2.34
CTDSP1-207ENST00000473420 EFCAB2Q5VUJ9 269 aa29.62■■■□□ 2.33
CTDSP1-207ENST00000473420 AKNAQ7Z591 1439 aa29.62■■■□□ 2.33
CTDSP1-207ENST00000473420 ADGRL1O94910 1474 aa29.55■■■□□ 2.32
CTDSP1-207ENST00000473420 COL17A1Q9UMD9 1497 aaPredicted RBP29.55■■■□□ 2.32
CTDSP1-207ENST00000473420 SAMD9LQ8IVG5 1584 aa29.54■■■□□ 2.32
CTDSP1-207ENST00000473420 CFDP1Q9UEE9 299 aaPredicted RBP29.53■■■□□ 2.32
CTDSP1-207ENST00000473420 ABCC1P33527 1531 aa29.52■■■□□ 2.32
CTDSP1-207ENST00000473420 MYOM3Q5VTT5 1437 aa29.52■■■□□ 2.32
CTDSP1-207ENST00000473420 RICTORQ6R327 1708 aa29.51■■■□□ 2.32
CTDSP1-207ENST00000473420 DENND4BO75064 1496 aaPredicted RBP29.49■■■□□ 2.31
CTDSP1-207ENST00000473420 PLEKHH2Q8IVE3 1493 aa29.48■■■□□ 2.31
CTDSP1-207ENST00000473420 FRMPD1Q5SYB0 1578 aa29.48■■■□□ 2.31
CTDSP1-207ENST00000473420 MIA2Q96PC5 1412 aa29.48■■■□□ 2.31
CTDSP1-207ENST00000473420 SCAPERQ9BY12 1400 aa29.48■■■□□ 2.31
CTDSP1-207ENST00000473420 POGZQ7Z3K3 1410 aa29.44■■■□□ 2.3
CTDSP1-207ENST00000473420 KIAA1107Q9UPP5 1409 aa29.44■■■□□ 2.3
CTDSP1-207ENST00000473420 SYCP2Q9BX26 1530 aa29.42■■■□□ 2.3
CTDSP1-207ENST00000473420 ARHGEF12Q9NZN5 1544 aa29.42■■■□□ 2.3
CTDSP1-207ENST00000473420 ZNF777Q9ULD5 760 aaPredicted RBP29.42■■■□□ 2.3
CTDSP1-207ENST00000473420 CAMSAP2Q08AD1 1489 aa29.42■■■□□ 2.3
CTDSP1-207ENST00000473420 ZMYM4Q5VZL5 1548 aa29.41■■■□□ 2.3
CTDSP1-207ENST00000473420 ZNF518AQ6AHZ1 1483 aa29.41■■■□□ 2.3
CTDSP1-207ENST00000473420 KDM5CP41229 1560 aa29.39■■■□□ 2.29
CTDSP1-207ENST00000473420 FGD6Q6ZV73 1430 aa29.38■■■□□ 2.29
CTDSP1-207ENST00000473420 RAPGEF3O95398 923 aa29.38■■■□□ 2.29
CTDSP1-207ENST00000473420 PTPN23Q9H3S7 1636 aa29.38■■■□□ 2.29
CTDSP1-207ENST00000473420 ZNF644Q9H582 1327 aaPredicted RBP29.34■■■□□ 2.29
CTDSP1-207ENST00000473420 TCOF1Q13428 1488 aaKnown RBP29.34■■■□□ 2.29
CTDSP1-207ENST00000473420 PPARGC1BQ86YN6 1023 aaKnown RBP29.33■■■□□ 2.29
CTDSP1-207ENST00000473420 TRAPPC8Q9Y2L5 1435 aa29.33■■■□□ 2.29
CTDSP1-207ENST00000473420 MBD5Q9P267 1494 aa29.33■■■□□ 2.29
CTDSP1-207ENST00000473420 ARHGEF5Q12774 1597 aa29.33■■■□□ 2.29
CTDSP1-207ENST00000473420 MAGI2Q86UL8 1455 aa29.32■■■□□ 2.28
CTDSP1-207ENST00000473420 HECW2Q9P2P5 1572 aa29.3■■■□□ 2.28
CTDSP1-207ENST00000473420 HNRNPMP52272 730 aaKnown RBP eCLIP29.29■■■□□ 2.28
CTDSP1-207ENST00000473420 ARHGEF40Q8TER5 1519 aa29.27■■■□□ 2.28
CTDSP1-207ENST00000473420 CCDC141Q6ZP82 1450 aa29.27■■■□□ 2.28
CTDSP1-207ENST00000473420 MLH3Q9UHC1 1453 aa29.26■■■□□ 2.27
CTDSP1-207ENST00000473420 RSPH4AQ5TD94 716 aa29.26■■■□□ 2.27
CTDSP1-207ENST00000473420 AFAP1Q8N556 730 aa29.26■■■□□ 2.27
CTDSP1-207ENST00000473420 ZFYVE16Q7Z3T8 1539 aa29.25■■■□□ 2.27
CTDSP1-207ENST00000473420 INO80Q9ULG1 1556 aaPredicted RBP29.23■■■□□ 2.27
CTDSP1-207ENST00000473420 KIDINS220Q9ULH0 1771 aa29.23■■■□□ 2.27
CTDSP1-207ENST00000473420 DNMT1P26358 1616 aaKnown RBP29.21■■■□□ 2.27
CTDSP1-207ENST00000473420 CROCC2H7BZ55 1655 aa29.21■■■□□ 2.27
CTDSP1-207ENST00000473420 ATP7AQ04656 1500 aa29.2■■■□□ 2.26
CTDSP1-207ENST00000473420 MAST1Q9Y2H9 1570 aa29.18■■■□□ 2.26
CTDSP1-207ENST00000473420 YEATS2Q9ULM3 1422 aa29.18■■■□□ 2.26
CTDSP1-207ENST00000473420 SPAG9O60271 1321 aaKnown RBP29.18■■■□□ 2.26
CTDSP1-207ENST00000473420 RTEL1-TNFRSF6BF6WH68 1400 aa29.17■■■□□ 2.26
CTDSP1-207ENST00000473420 ABCA6Q8N139 1617 aa29.16■■■□□ 2.26
CTDSP1-207ENST00000473420 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.16■■■□□ 2.268e-9■■■■■ 57.5
CTDSP1-207ENST00000473420 RRBP1Q9P2E9 1410 aaKnown RBP29.16■■■□□ 2.26
CTDSP1-207ENST00000473420 DIP2CQ9Y2E4 1556 aa29.16■■■□□ 2.26
CTDSP1-207ENST00000473420 SHANK2Q9UPX8 1470 aa29.14■■■□□ 2.26
CTDSP1-207ENST00000473420 DAPK1P53355 1430 aa29.12■■■□□ 2.25
CTDSP1-207ENST00000473420 REREQ9P2R6 1566 aa29.12■■■□□ 2.25
CTDSP1-207ENST00000473420 ATP10AO60312 1499 aa29.11■■■□□ 2.25
CTDSP1-207ENST00000473420 ABCC5O15440 1437 aa29.11■■■□□ 2.25
CTDSP1-207ENST00000473420 ADGBQ8N7X0 1667 aa29.1■■■□□ 2.25
CTDSP1-207ENST00000473420 TSPY4P0CV99 314 aa29.1■■■□□ 2.25
CTDSP1-207ENST00000473420 TSPY10P0CW01 314 aa29.1■■■□□ 2.25
CTDSP1-207ENST00000473420 FAM50AQ14320 339 aaKnown RBP29.1■■■□□ 2.25
CTDSP1-207ENST00000473420 MYT1LQ9UL68 1186 aa29.1■■■□□ 2.25
CTDSP1-207ENST00000473420 C9orf84Q5VXU9 1444 aa29.09■■■□□ 2.25
CTDSP1-207ENST00000473420 PLXNC1O60486 1568 aa29.07■■■□□ 2.24
CTDSP1-207ENST00000473420 SIGLEC1Q9BZZ2 1709 aa29.03■■■□□ 2.24
CTDSP1-207ENST00000473420 AGLP35573 1532 aa28.99■■■□□ 2.23
CTDSP1-207ENST00000473420 ADGRL2O95490 1459 aa28.98■■■□□ 2.23
CTDSP1-207ENST00000473420 A2MP01023 1474 aa28.98■■■□□ 2.23
CTDSP1-207ENST00000473420 BCORL1Q5H9F3 1711 aa28.94■■■□□ 2.22
CTDSP1-207ENST00000473420 PTPRKQ15262 1439 aa28.93■■■□□ 2.22
CTDSP1-207ENST00000473420 DHX29Q7Z478 1369 aaKnown RBP28.92■■■□□ 2.22
CTDSP1-207ENST00000473420 ANKRD30AQ9BXX3 1397 aa28.92■■■□□ 2.22
CTDSP1-207ENST00000473420 DUOX2Q9NRD8 1548 aa28.91■■■□□ 2.22
CTDSP1-207ENST00000473420 NCOA1Q15788 1441 aa28.9■■■□□ 2.22
CTDSP1-207ENST00000473420 EIF2AK4Q9P2K8 1649 aaKnown RBP28.89■■■□□ 2.22
CTDSP1-207ENST00000473420 ARID4BQ4LE39 1312 aaPredicted RBP28.89■■■□□ 2.21
CTDSP1-207ENST00000473420 ROCK1Q13464 1354 aa28.88■■■□□ 2.21
CTDSP1-207ENST00000473420 KIF15Q9NS87 1388 aa28.88■■■□□ 2.21
CTDSP1-207ENST00000473420 CHIC2Q9UKJ5 165 aa28.87■■■□□ 2.21
CTDSP1-207ENST00000473420 ADAMTSL3P82987 1691 aa28.86■■■□□ 2.21
CTDSP1-207ENST00000473420 ERBINQ96RT1 1412 aa28.84■■■□□ 2.21
CTDSP1-207ENST00000473420 ITGAEP38570 1179 aa28.82■■■□□ 2.2
CTDSP1-207ENST00000473420 RRP7BPQ9NSQ0 103 aa28.81■■■□□ 2.2
CTDSP1-207ENST00000473420 FER1L4A9Z1Z3 1794 aa28.79■■■□□ 2.2
CTDSP1-207ENST00000473420 RNF17Q9BXT8 1623 aaKnown RBP28.79■■■□□ 2.2
CTDSP1-207ENST00000473420 MADDQ8WXG6 1647 aa28.76■■■□□ 2.2
CTDSP1-207ENST00000473420 GCC2Q8IWJ2 1684 aa28.76■■■□□ 2.19
CTDSP1-207ENST00000473420 KDM4FA0A1W2PPD8 638 aa28.73■■■□□ 2.19
CTDSP1-207ENST00000473420 FAM135AQ9P2D6 1515 aa28.73■■■□□ 2.19
CTDSP1-207ENST00000473420 DEPDC5O75140 1603 aa28.72■■■□□ 2.19
CTDSP1-207ENST00000473420 ANKRD50Q9ULJ7 1429 aa28.72■■■□□ 2.19
CTDSP1-207ENST00000473420 KIF3BO15066 747 aa28.72■■■□□ 2.19
CTDSP1-207ENST00000473420 MLECQ14165 292 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms