RNA–Protein interactions for RNA: ENST00000472677.1

TRABD-206, Transcript of TraB domain containing, humanhuman

TSL 1 (best)

Gene TRABD, Length 1,661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-206ENST00000472677 CDC42BPAQ5VT25 1732 aa32.98■■■□□ 2.87
TRABD-206ENST00000472677 PHLDB1Q86UU1 1377 aa32.98■■■□□ 2.87
TRABD-206ENST00000472677 PREX2Q70Z35 1606 aa32.97■■■□□ 2.87
TRABD-206ENST00000472677 ARAP3Q8WWN8 1544 aa32.97■■■□□ 2.87
TRABD-206ENST00000472677 MYOM3Q5VTT5 1437 aa32.94■■■□□ 2.86
TRABD-206ENST00000472677 CDC42BPBQ9Y5S2 1711 aa32.94■■■□□ 2.86
TRABD-206ENST00000472677 ITSN2Q9NZM3 1697 aa32.93■■■□□ 2.86
TRABD-206ENST00000472677 NEO1Q92859 1461 aa32.93■■■□□ 2.86
TRABD-206ENST00000472677 AKNAQ7Z591 1439 aa32.9■■■□□ 2.86
TRABD-206ENST00000472677 CFAP74Q9C0B2 1584 aa32.89■■■□□ 2.86
TRABD-206ENST00000472677 ZNF644Q9H582 1327 aaPredicted RBP32.85■■■□□ 2.85
TRABD-206ENST00000472677 MIA2Q96PC5 1412 aa32.85■■■□□ 2.85
TRABD-206ENST00000472677 ADGRL1O94910 1474 aa32.83■■■□□ 2.85
TRABD-206ENST00000472677 FGD6Q6ZV73 1430 aa32.81■■■□□ 2.84
TRABD-206ENST00000472677 SCAPERQ9BY12 1400 aa32.81■■■□□ 2.84
TRABD-206ENST00000472677 SAMD9LQ8IVG5 1584 aa32.79■■■□□ 2.84
TRABD-206ENST00000472677 HNRNPMP52272 730 aaKnown RBP eCLIP32.77■■■□□ 2.84
TRABD-206ENST00000472677 CAMSAP2Q08AD1 1489 aa32.76■■■□□ 2.84
TRABD-206ENST00000472677 PLEKHH2Q8IVE3 1493 aa32.76■■■□□ 2.84
TRABD-206ENST00000472677 RAPGEF3O95398 923 aa32.75■■■□□ 2.83
TRABD-206ENST00000472677 COL17A1Q9UMD9 1497 aaPredicted RBP32.74■■■□□ 2.83
TRABD-206ENST00000472677 FAM50AQ14320 339 aaKnown RBP32.74■■■□□ 2.83
TRABD-206ENST00000472677 ABCC1P33527 1531 aa32.74■■■□□ 2.83
TRABD-206ENST00000472677 KDM6BO15054 1643 aa32.74■■■□□ 2.83
TRABD-206ENST00000472677 DENND4BO75064 1496 aaPredicted RBP32.73■■■□□ 2.83
TRABD-206ENST00000472677 KIAA1107Q9UPP5 1409 aa32.73■■■□□ 2.83
TRABD-206ENST00000472677 PTPN23Q9H3S7 1636 aa32.72■■■□□ 2.83
TRABD-206ENST00000472677 SYCP2Q9BX26 1530 aa32.71■■■□□ 2.83
TRABD-206ENST00000472677 ARHGEF12Q9NZN5 1544 aa32.71■■■□□ 2.83
TRABD-206ENST00000472677 AFAP1Q8N556 730 aa32.69■■■□□ 2.82
TRABD-206ENST00000472677 POGZQ7Z3K3 1410 aa32.66■■■□□ 2.82
TRABD-206ENST00000472677 TRAPPC8Q9Y2L5 1435 aa32.66■■■□□ 2.82
TRABD-206ENST00000472677 TCOF1Q13428 1488 aaKnown RBP32.66■■■□□ 2.82
TRABD-206ENST00000472677 ZNF518AQ6AHZ1 1483 aa32.64■■■□□ 2.82
TRABD-206ENST00000472677 MBD5Q9P267 1494 aa32.64■■■□□ 2.82
TRABD-206ENST00000472677 RSPH4AQ5TD94 716 aa32.63■■■□□ 2.81
TRABD-206ENST00000472677 RRBP1Q9P2E9 1410 aaKnown RBP32.62■■■□□ 2.81
TRABD-206ENST00000472677 MYT1LQ9UL68 1186 aa32.6■■■□□ 2.81
TRABD-206ENST00000472677 RICTORQ6R327 1708 aa32.58■■■□□ 2.81
TRABD-206ENST00000472677 FRMPD1Q5SYB0 1578 aa32.57■■■□□ 2.8
TRABD-206ENST00000472677 TSPY4P0CV99 314 aa32.56■■■□□ 2.8
TRABD-206ENST00000472677 TSPY10P0CW01 314 aa32.56■■■□□ 2.8
TRABD-206ENST00000472677 CCDC141Q6ZP82 1450 aa32.56■■■□□ 2.8
TRABD-206ENST00000472677 SPAG9O60271 1321 aaKnown RBP32.54■■■□□ 2.8
TRABD-206ENST00000472677 ARHGEF5Q12774 1597 aa32.54■■■□□ 2.8
TRABD-206ENST00000472677 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.54■■■□□ 2.8
TRABD-206ENST00000472677 ITGAEP38570 1179 aa32.53■■■□□ 2.8
TRABD-206ENST00000472677 KDM5CP41229 1560 aa32.5■■■□□ 2.79
TRABD-206ENST00000472677 ABCC5O15440 1437 aa32.5■■■□□ 2.79
TRABD-206ENST00000472677 DAPK1P53355 1430 aa32.5■■■□□ 2.79
TRABD-206ENST00000472677 ZMYM4Q5VZL5 1548 aa32.47■■■□□ 2.79
TRABD-206ENST00000472677 DNMT1P26358 1616 aaKnown RBP32.47■■■□□ 2.79
TRABD-206ENST00000472677 MAGI2Q86UL8 1455 aa32.45■■■□□ 2.79
TRABD-206ENST00000472677 MLH3Q9UHC1 1453 aa32.45■■■□□ 2.79
TRABD-206ENST00000472677 CHIC2Q9UKJ5 165 aa32.44■■■□□ 2.78
TRABD-206ENST00000472677 HECW2Q9P2P5 1572 aa32.44■■■□□ 2.78
TRABD-206ENST00000472677 C9orf84Q5VXU9 1444 aa32.43■■■□□ 2.78
TRABD-206ENST00000472677 RTEL1-TNFRSF6BF6WH68 1400 aa32.41■■■□□ 2.78
TRABD-206ENST00000472677 YEATS2Q9ULM3 1422 aa32.41■■■□□ 2.78
TRABD-206ENST00000472677 ATP7AQ04656 1500 aa32.4■■■□□ 2.78
TRABD-206ENST00000472677 ZFYVE16Q7Z3T8 1539 aa32.4■■■□□ 2.78
TRABD-206ENST00000472677 SHANK2Q9UPX8 1470 aa32.38■■■□□ 2.77
TRABD-206ENST00000472677 INO80Q9ULG1 1556 aaPredicted RBP32.36■■■□□ 2.77
TRABD-206ENST00000472677 CROCC2H7BZ55 1655 aa32.36■■■□□ 2.77
TRABD-206ENST00000472677 KIDINS220Q9ULH0 1771 aa32.36■■■□□ 2.77
TRABD-206ENST00000472677 PTPRKQ15262 1439 aa32.36■■■□□ 2.77
TRABD-206ENST00000472677 MAST1Q9Y2H9 1570 aa32.34■■■□□ 2.77
TRABD-206ENST00000472677 ANKRD30AQ9BXX3 1397 aa32.31■■■□□ 2.76
TRABD-206ENST00000472677 RRP7BPQ9NSQ0 103 aa32.31■■■□□ 2.76
TRABD-206ENST00000472677 ARHGEF40Q8TER5 1519 aa32.31■■■□□ 2.76
TRABD-206ENST00000472677 ATP10AO60312 1499 aa32.3■■■□□ 2.76
TRABD-206ENST00000472677 ABCA6Q8N139 1617 aa32.28■■■□□ 2.76
TRABD-206ENST00000472677 DIP2CQ9Y2E4 1556 aa32.28■■■□□ 2.76
TRABD-206ENST00000472677 NCOA1Q15788 1441 aa32.26■■■□□ 2.76
TRABD-206ENST00000472677 KIF15Q9NS87 1388 aa32.24■■■□□ 2.75
TRABD-206ENST00000472677 TRIM26Q12899 539 aaPredicted RBP32.24■■■□□ 2.75
TRABD-206ENST00000472677 ADGRL2O95490 1459 aa32.23■■■□□ 2.75
TRABD-206ENST00000472677 ROCK1Q13464 1354 aa32.23■■■□□ 2.75
TRABD-206ENST00000472677 PLXNC1O60486 1568 aa32.22■■■□□ 2.75
TRABD-206ENST00000472677 ARID4BQ4LE39 1312 aaPredicted RBP32.22■■■□□ 2.75
TRABD-206ENST00000472677 A2MP01023 1474 aa32.21■■■□□ 2.75
TRABD-206ENST00000472677 ADGBQ8N7X0 1667 aa32.2■■■□□ 2.75
TRABD-206ENST00000472677 DHX29Q7Z478 1369 aaKnown RBP32.19■■■□□ 2.74
TRABD-206ENST00000472677 DUOX2Q9NRD8 1548 aa32.15■■■□□ 2.74
TRABD-206ENST00000472677 REREQ9P2R6 1566 aa32.14■■■□□ 2.73
TRABD-206ENST00000472677 KIF3BO15066 747 aa32.1■■■□□ 2.73
TRABD-206ENST00000472677 ANKRD50Q9ULJ7 1429 aa32.09■■■□□ 2.73
TRABD-206ENST00000472677 MLECQ14165 292 aa32.08■■■□□ 2.73
TRABD-206ENST00000472677 ERBINQ96RT1 1412 aa32.07■■■□□ 2.72
TRABD-206ENST00000472677 SIGLEC1Q9BZZ2 1709 aa32.06■■■□□ 2.72
TRABD-206ENST00000472677 HFM1A2PYH4 1435 aa32.06■■■□□ 2.72
TRABD-206ENST00000472677 AGLP35573 1532 aa32.06■■■□□ 2.72
TRABD-206ENST00000472677 NAIPQ13075 1403 aa32.05■■■□□ 2.72
TRABD-206ENST00000472677 GGT6Q6P531 493 aa32.04■■■□□ 2.72
TRABD-206ENST00000472677 PCGF6Q9BYE7 350 aa32■■■□□ 2.71
TRABD-206ENST00000472677 EIF2AK4Q9P2K8 1649 aaKnown RBP31.97■■■□□ 2.71
TRABD-206ENST00000472677 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.95■■■□□ 2.719e-7■□□□□ 9.1
TRABD-206ENST00000472677 GCC2Q8IWJ2 1684 aa31.95■■■□□ 2.71
TRABD-206ENST00000472677 SETD5Q9C0A6 1442 aa31.94■■■□□ 2.7
TRABD-206ENST00000472677 ESF1Q9H501 851 aaKnown RBP31.92■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms