RNA–Protein interactions for RNA: ENST00000472677.1

TRABD-206, Transcript of TraB domain containing, humanhuman

TSL 1 (best)

Gene TRABD, Length 1,661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-206ENST00000472677 NISCHQ9Y2I1 1504 aa50.59■■■■■ 5.69
TRABD-206ENST00000472677 CCDC180Q9P1Z9 1646 aa44.62■■■■■ 4.73
TRABD-206ENST00000472677 ABCC9O60706 1549 aa43.26■■■■■ 4.52
TRABD-206ENST00000472677 DCAF8L2P0C7V8 631 aa42.27■■■■■ 4.36
TRABD-206ENST00000472677 ZCCHC6Q5VYS8 1495 aaKnown RBP42.24■■■■■ 4.35
TRABD-206ENST00000472677 NACADO15069 1562 aa41.87■■■■■ 4.29
TRABD-206ENST00000472677 DCAF1Q9Y4B6 1507 aa41.82■■■■■ 4.29
TRABD-206ENST00000472677 RB1CC1Q8TDY2 1594 aa41.79■■■■■ 4.28
TRABD-206ENST00000472677 MYO15BQ96JP2 1530 aa41.77■■■■■ 4.28
TRABD-206ENST00000472677 SCRIBQ14160 1630 aa40.88■■■■■ 4.13
TRABD-206ENST00000472677 UNC13AQ9UPW8 1703 aa40.77■■■■■ 4.12
TRABD-206ENST00000472677 PABPN1Q86U42 306 aaKnown RBP eCLIP40.59■■■■■ 4.09
TRABD-206ENST00000472677 SHROOM4Q9ULL8 1493 aa40.49■■■■■ 4.07
TRABD-206ENST00000472677 BICRAQ9NZM4 1560 aa40.47■■■■■ 4.07
TRABD-206ENST00000472677 EIF4G1Q04637 1599 aaKnown RBP39.39■■■■□ 3.9
TRABD-206ENST00000472677 CECR2Q9BXF3 1484 aa39.38■■■■□ 3.89
TRABD-206ENST00000472677 DNAJC5BQ9UF47 199 aa39.18■■■■□ 3.86
TRABD-206ENST00000472677 BAZ1AQ9NRL2 1556 aaPredicted RBP39.17■■■■□ 3.86
TRABD-206ENST00000472677 SMARCA4P51532 1647 aa39.1■■■■□ 3.85
TRABD-206ENST00000472677 CC2D2AQ9P2K1 1620 aa39.09■■■■□ 3.85
TRABD-206ENST00000472677 MROH2BQ7Z745 1585 aa39.01■■■■□ 3.84
TRABD-206ENST00000472677 RSF1Q96T23 1441 aaPredicted RBP38.81■■■■□ 3.8
TRABD-206ENST00000472677 ATAD2BQ9ULI0 1458 aa38.77■■■■□ 3.8
TRABD-206ENST00000472677 SMARCA2P51531 1590 aa38.75■■■■□ 3.79
TRABD-206ENST00000472677 PEG3Q9GZU2 1588 aa38.67■■■■□ 3.78
TRABD-206ENST00000472677 NCAPD3P42695 1498 aa38.66■■■■□ 3.78
TRABD-206ENST00000472677 WIZO95785 1651 aa38.61■■■■□ 3.77
TRABD-206ENST00000472677 BAZ1BQ9UIG0 1483 aaKnown RBP38.52■■■■□ 3.76
TRABD-206ENST00000472677 HMGXB3Q12766 1538 aa38.48■■■■□ 3.75
TRABD-206ENST00000472677 SUPT5HO00267 1087 aaKnown RBP38.43■■■■□ 3.74
TRABD-206ENST00000472677 TOP2AP11388 1531 aaKnown RBP38.22■■■■□ 3.71
TRABD-206ENST00000472677 CCDC88BA6NC98 1476 aa37.82■■■■□ 3.65
TRABD-206ENST00000472677 CADPSQ9ULU8 1353 aa37.61■■■■□ 3.61
TRABD-206ENST00000472677 NESP48681 1621 aa37.58■■■■□ 3.61
TRABD-206ENST00000472677 LAMC3Q9Y6N6 1575 aa37.52■■■■□ 3.6
TRABD-206ENST00000472677 CFTRP13569 1480 aa37.47■■■■□ 3.59
TRABD-206ENST00000472677 PDS5BQ9NTI5 1447 aa37.32■■■■□ 3.57
TRABD-206ENST00000472677 ERCC6Q03468 1493 aa37.26■■■■□ 3.56
TRABD-206ENST00000472677 FANCD2Q9BXW9 1451 aa37.17■■■■□ 3.54
TRABD-206ENST00000472677 PRDM2Q13029 1718 aa37.12■■■■□ 3.53
TRABD-206ENST00000472677 KIF21AQ7Z4S6 1674 aa37.08■■■■□ 3.53
TRABD-206ENST00000472677 CEP164Q9UPV0 1460 aa37.06■■■■□ 3.52
TRABD-206ENST00000472677 MRC2Q9UBG0 1479 aa36.86■■■■□ 3.49
TRABD-206ENST00000472677 THOC2Q8NI27 1593 aaKnown RBP36.79■■■■□ 3.48
TRABD-206ENST00000472677 URB2Q14146 1524 aaKnown RBP36.73■■■■□ 3.47
TRABD-206ENST00000472677 WDR62O43379 1518 aa36.68■■■■□ 3.46
TRABD-206ENST00000472677 ABCC8Q09428 1581 aa36.65■■■■□ 3.46
TRABD-206ENST00000472677 TOPBP1Q92547 1522 aa36.61■■■■□ 3.45
TRABD-206ENST00000472677 DNMBPQ6XZF7 1577 aa36.6■■■■□ 3.45
TRABD-206ENST00000472677 WRNQ14191 1432 aaPredicted RBP eCLIP36.59■■■■□ 3.45
TRABD-206ENST00000472677 CUX1P39880 1505 aa36.56■■■■□ 3.44
TRABD-206ENST00000472677 CUX2O14529 1486 aa36.55■■■■□ 3.44
TRABD-206ENST00000472677 SYNJ1O43426 1573 aa36.42■■■■□ 3.42
TRABD-206ENST00000472677 TOP2BQ02880 1626 aa36.38■■■■□ 3.41
TRABD-206ENST00000472677 FGD5Q6ZNL6 1462 aa36.36■■■■□ 3.41
TRABD-206ENST00000472677 POLA1P09884 1462 aaPredicted RBP36.35■■■■□ 3.41
TRABD-206ENST00000472677 BIVM-ERCC5R4GMW8 1640 aa36.34■■■■□ 3.41
TRABD-206ENST00000472677 SOGA1O94964 1423 aa36.27■■■■□ 3.4
TRABD-206ENST00000472677 TRIM41Q8WV44 630 aa36.25■■■■□ 3.39
TRABD-206ENST00000472677 IFT140Q96RY7 1462 aa36.24■■■■□ 3.39
TRABD-206ENST00000472677 RAD54L2Q9Y4B4 1467 aa36.22■■■■□ 3.39
TRABD-206ENST00000472677 CHIC1Q5VXU3 224 aa36.14■■■■□ 3.38
TRABD-206ENST00000472677 TARBP1Q13395 1621 aaKnown RBP36.13■■■■□ 3.37
TRABD-206ENST00000472677 ZNF608Q9ULD9 1512 aaPredicted RBP36.05■■■■□ 3.36
TRABD-206ENST00000472677 TDRD9Q8NDG6 1382 aaKnown RBP36.01■■■■□ 3.36
TRABD-206ENST00000472677 ABCA10Q8WWZ4 1543 aa36.01■■■■□ 3.35
TRABD-206ENST00000472677 AQRO60306 1485 aaKnown RBP eCLIP35.96■■■■□ 3.352e-8■■■■□ 19.3
TRABD-206ENST00000472677 WDR97A6NE52 1622 aa35.92■■■■□ 3.34
TRABD-206ENST00000472677 EIF4G3O43432 1585 aaKnown RBP35.89■■■■□ 3.34
TRABD-206ENST00000472677 GAPVD1Q14C86 1478 aa35.83■■■■□ 3.33
TRABD-206ENST00000472677 KIF27Q86VH2 1401 aa35.79■■■■□ 3.32
TRABD-206ENST00000472677 ABCA5Q8WWZ7 1642 aa35.77■■■■□ 3.32
TRABD-206ENST00000472677 GRIN2BQ13224 1484 aa35.74■■■■□ 3.31
TRABD-206ENST00000472677 RUSC2Q8N2Y8 1516 aa35.65■■■■□ 3.3
TRABD-206ENST00000472677 PBRM1Q86U86 1689 aa35.63■■■■□ 3.29
TRABD-206ENST00000472677 SNAPC4Q5SXM2 1469 aa35.6■■■■□ 3.29
TRABD-206ENST00000472677 ERICH3Q5RHP9 1530 aa35.59■■■■□ 3.29
TRABD-206ENST00000472677 IGF1RP08069 1367 aa35.57■■■■□ 3.28
TRABD-206ENST00000472677 MAGI1Q96QZ7 1491 aaPredicted RBP35.55■■■■□ 3.28
TRABD-206ENST00000472677 FAM9AQ8IZU1 332 aaPredicted RBP35.53■■■■□ 3.28
TRABD-206ENST00000472677 FBLN2P98095 1184 aa35.52■■■■□ 3.28
TRABD-206ENST00000472677 CHMP7Q8WUX9 453 aaPredicted RBP35.48■■■■□ 3.27
TRABD-206ENST00000472677 EEA1Q15075 1411 aa35.47■■■■□ 3.27
TRABD-206ENST00000472677 FHAD1B1AJZ9 1412 aa35.43■■■■□ 3.26
TRABD-206ENST00000472677 SYNJ2O15056 1496 aa35.43■■■■□ 3.26
TRABD-206ENST00000472677 CSRNP3Q8WYN3 585 aa35.42■■■■□ 3.26
TRABD-206ENST00000472677 ADAMTS12P58397 1594 aa35.4■■■■□ 3.26
TRABD-206ENST00000472677 CARMIL1Q5VZK9 1371 aa35.38■■■■□ 3.25
TRABD-206ENST00000472677 CUL7Q14999 1698 aa35.36■■■■□ 3.25
TRABD-206ENST00000472677 CHD1O14646 1710 aa35.3■■■■□ 3.24
TRABD-206ENST00000472677 OSCARQ8IYS5 282 aa35.27■■■■□ 3.24
TRABD-206ENST00000472677 GRIN2AQ12879 1464 aa35.27■■■■□ 3.24
TRABD-206ENST00000472677 RAPGEF2Q9Y4G8 1499 aa35.22■■■■□ 3.23
TRABD-206ENST00000472677 PRXQ9BXM0 1461 aa35.2■■■■□ 3.23
TRABD-206ENST00000472677 EHMT2Q96KQ7 1210 aa35.07■■■■□ 3.2
TRABD-206ENST00000472677 NUP160Q12769 1436 aa35.05■■■■□ 3.2
TRABD-206ENST00000472677 CEP170Q5SW79 1584 aa35.04■■■■□ 3.2
TRABD-206ENST00000472677 KIF21BO75037 1637 aa35■■■■□ 3.19
TRABD-206ENST00000472677 CLASP1Q7Z460 1538 aa34.93■■■■□ 3.18
TRABD-206ENST00000472677 GOLGA3Q08378 1498 aa34.91■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms