RNA–Protein interactions for RNA: ENST00000472420.5

LRPPRC-208, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 2

Gene LRPPRC, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-208ENST00000472420 NCOA1Q15788 1441 aa13.35□□□□□ -0.27
LRPPRC-208ENST00000472420 KIAA0556O60303 1618 aa13.35□□□□□ -0.27
LRPPRC-208ENST00000472420 ZNF335Q9H4Z2 1342 aaPredicted RBP13.34□□□□□ -0.27
LRPPRC-208ENST00000472420 RNF216Q9NWF9 866 aaPredicted RBP13.33□□□□□ -0.28
LRPPRC-208ENST00000472420 UGGT2Q9NYU1 1516 aa13.33□□□□□ -0.28
LRPPRC-208ENST00000472420 PIP4K2BP78356 416 aa13.32□□□□□ -0.28
LRPPRC-208ENST00000472420 RGS17Q9UGC6 210 aaPredicted RBP13.32□□□□□ -0.28
LRPPRC-208ENST00000472420 ZFYVE16Q7Z3T8 1539 aa13.32□□□□□ -0.28
LRPPRC-208ENST00000472420 EFCAB5A4FU69 1503 aa13.31□□□□□ -0.28
LRPPRC-208ENST00000472420 FHOD3Q2V2M9 1422 aa13.3□□□□□ -0.28
LRPPRC-208ENST00000472420 DENND4BO75064 1496 aaPredicted RBP13.3□□□□□ -0.28
LRPPRC-208ENST00000472420 ZMYM4Q5VZL5 1548 aa13.3□□□□□ -0.28
LRPPRC-208ENST00000472420 ABCA8O94911 1581 aa13.3□□□□□ -0.28
LRPPRC-208ENST00000472420 TOM1O60784 492 aa13.28□□□□□ -0.28
LRPPRC-208ENST00000472420 NPM3O75607 178 aaKnown RBP13.27□□□□□ -0.29
LRPPRC-208ENST00000472420 HOXD11P31277 338 aaPredicted RBP13.27□□□□□ -0.29
LRPPRC-208ENST00000472420 MAGI2Q86UL8 1455 aa13.26□□□□□ -0.29
LRPPRC-208ENST00000472420 CARMIL1Q5VZK9 1371 aa13.25□□□□□ -0.29
LRPPRC-208ENST00000472420 SETD1AO15047 1707 aaKnown RBP13.24□□□□□ -0.29
LRPPRC-208ENST00000472420 KIF27Q86VH2 1401 aa13.23□□□□□ -0.29
LRPPRC-208ENST00000472420 CAMSAP1Q5T5Y3 1602 aa13.23□□□□□ -0.29
LRPPRC-208ENST00000472420 SRCAPQ6ZRS2 3230 aa13.22□□□□□ -0.29
LRPPRC-208ENST00000472420 C3P01024 1663 aa13.21□□□□□ -0.29
LRPPRC-208ENST00000472420 POTEAQ6S8J7 498 aa13.19□□□□□ -0.3
LRPPRC-208ENST00000472420 TRAPPC8Q9Y2L5 1435 aa13.19□□□□□ -0.3
LRPPRC-208ENST00000472420 CFAP74Q9C0B2 1584 aa13.19□□□□□ -0.3
LRPPRC-208ENST00000472420 HECW1Q76N89 1606 aa13.18□□□□□ -0.3
LRPPRC-208ENST00000472420 NCKAP5LQ9HCH0 1330 aa13.17□□□□□ -0.3
LRPPRC-208ENST00000472420 C9orf84Q5VXU9 1444 aa13.17□□□□□ -0.3
LRPPRC-208ENST00000472420 ATP10AO60312 1499 aa13.16□□□□□ -0.3
LRPPRC-208ENST00000472420 ATP10BO94823 1461 aa13.16□□□□□ -0.3
LRPPRC-208ENST00000472420 PTPRKQ15262 1439 aa13.15□□□□□ -0.3
LRPPRC-208ENST00000472420 CPS1P31327 1500 aa13.15□□□□□ -0.3
LRPPRC-208ENST00000472420 ALKQ9UM73 1620 aa13.14□□□□□ -0.31
LRPPRC-208ENST00000472420 PKD2Q13563 968 aa13.14□□□□□ -0.31
LRPPRC-208ENST00000472420 UPF1Q92900 1129 aaKnown RBP eCLIP13.13□□□□□ -0.31
LRPPRC-208ENST00000472420 PLA2R1Q13018 1463 aa13.12□□□□□ -0.31
LRPPRC-208ENST00000472420 ARID3CA6NKF2 412 aa13.12□□□□□ -0.31
LRPPRC-208ENST00000472420 GOLGA3Q08378 1498 aa13.11□□□□□ -0.31
LRPPRC-208ENST00000472420 TCOF1Q13428 1488 aaKnown RBP13.1□□□□□ -0.31
LRPPRC-208ENST00000472420 SUPT6HQ7KZ85 1726 aaKnown RBP13.08□□□□□ -0.32
LRPPRC-208ENST00000472420 RAPGEF2Q9Y4G8 1499 aa13.07□□□□□ -0.32
LRPPRC-208ENST00000472420 ZNF142P52746 1687 aaPredicted RBP13.05□□□□□ -0.32
LRPPRC-208ENST00000472420 NPATQ14207 1427 aa13.05□□□□□ -0.32
LRPPRC-208ENST00000472420 SHANK2Q9UPX8 1470 aa13.04□□□□□ -0.32
LRPPRC-208ENST00000472420 ESF1Q9H501 851 aaKnown RBP13.04□□□□□ -0.32
LRPPRC-208ENST00000472420 SCAPERQ9BY12 1400 aa13.01□□□□□ -0.33
LRPPRC-208ENST00000472420 CNTLNQ9NXG0 1405 aa13.01□□□□□ -0.33
LRPPRC-208ENST00000472420 CTTNBP2Q8WZ74 1663 aa13.01□□□□□ -0.33
LRPPRC-208ENST00000472420 REREQ9P2R6 1566 aa13□□□□□ -0.33
LRPPRC-208ENST00000472420 AGLP35573 1532 aa13□□□□□ -0.33
LRPPRC-208ENST00000472420 MYO3AQ8NEV4 1616 aa12.99□□□□□ -0.33
LRPPRC-208ENST00000472420 FAM9AQ8IZU1 332 aaPredicted RBP12.99□□□□□ -0.33
LRPPRC-208ENST00000472420 CEP170BQ9Y4F5 1589 aaPredicted RBP12.98□□□□□ -0.33
LRPPRC-208ENST00000472420 DCAF8L1A6NGE4 600 aa12.98□□□□□ -0.33
LRPPRC-208ENST00000472420 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.98□□□□□ -0.33
LRPPRC-208ENST00000472420 MROH2AA6NES4 1674 aa12.97□□□□□ -0.33
LRPPRC-208ENST00000472420 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.97□□□□□ -0.33
LRPPRC-208ENST00000472420 HNRNPUL2Q1KMD3 747 aaKnown RBP12.97□□□□□ -0.33
LRPPRC-208ENST00000472420 RNF17Q9BXT8 1623 aaKnown RBP12.97□□□□□ -0.33
LRPPRC-208ENST00000472420 VWDEQ8N2E2 1590 aa12.95□□□□□ -0.34
LRPPRC-208ENST00000472420 DIP2CQ9Y2E4 1556 aa12.95□□□□□ -0.34
LRPPRC-208ENST00000472420 POLR1AO95602 1720 aaPredicted RBP12.95□□□□□ -0.34
LRPPRC-208ENST00000472420 RAPGEF6Q8TEU7 1601 aa12.93□□□□□ -0.34
LRPPRC-208ENST00000472420 IFFO2Q5TF58 517 aa12.92□□□□□ -0.34
LRPPRC-208ENST00000472420 NEURL4Q96JN8 1562 aa12.92□□□□□ -0.34
LRPPRC-208ENST00000472420 LRRC7Q96NW7 1537 aa12.91□□□□□ -0.34
LRPPRC-208ENST00000472420 ZNF518AQ6AHZ1 1483 aa12.91□□□□□ -0.34
LRPPRC-208ENST00000472420 KDM5CP41229 1560 aa12.9□□□□□ -0.34
LRPPRC-208ENST00000472420 ABCA6Q8N139 1617 aa12.89□□□□□ -0.35
LRPPRC-208ENST00000472420 TRIM52Q96A61 297 aa12.89□□□□□ -0.35
LRPPRC-208ENST00000472420 ZMYM3Q14202 1370 aa12.89□□□□□ -0.35
LRPPRC-208ENST00000472420 PLEKHD1A6NEE1 506 aa12.88□□□□□ -0.35
LRPPRC-208ENST00000472420 SYNMO15061 1565 aa12.88□□□□□ -0.35
LRPPRC-208ENST00000472420 PLCH2O75038 1416 aa12.87□□□□□ -0.35
LRPPRC-208ENST00000472420 NUP153P49790 1475 aaKnown RBP12.86□□□□□ -0.35
LRPPRC-208ENST00000472420 DNMT1P26358 1616 aaKnown RBP12.86□□□□□ -0.35
LRPPRC-208ENST00000472420 SLC4A1APQ9BWU0 796 aaKnown RBP12.85□□□□□ -0.35
LRPPRC-208ENST00000472420 MYT1LQ9UL68 1186 aa12.85□□□□□ -0.35
LRPPRC-208ENST00000472420 A2ML1A8K2U0 1454 aa12.85□□□□□ -0.35
LRPPRC-208ENST00000472420 STRCP1A6NGW2 1772 aa12.84□□□□□ -0.35
LRPPRC-208ENST00000472420 SETBP1Q9Y6X0 1596 aa12.83□□□□□ -0.36
LRPPRC-208ENST00000472420 FAM135BQ49AJ0 1406 aa12.82□□□□□ -0.36
LRPPRC-208ENST00000472420 P3H3Q8IVL6 736 aa12.82□□□□□ -0.36
LRPPRC-208ENST00000472420 AFAP1Q8N556 730 aa12.82□□□□□ -0.36
LRPPRC-208ENST00000472420 ZRANB1Q9UGI0 708 aa12.82□□□□□ -0.36
LRPPRC-208ENST00000472420 CDK12Q9NYV4 1490 aaPredicted RBP12.81□□□□□ -0.36
LRPPRC-208ENST00000472420 MLH3Q9UHC1 1453 aa12.81□□□□□ -0.36
LRPPRC-208ENST00000472420 ZNF772Q68DY9 489 aaPredicted RBP12.81□□□□□ -0.36
LRPPRC-208ENST00000472420 RBM33Q96EV2 1170 aaKnown RBP12.81□□□□□ -0.36
LRPPRC-208ENST00000472420 CLTCQ00610 1675 aaKnown RBP12.8□□□□□ -0.36
LRPPRC-208ENST00000472420 EFCAB2Q5VUJ9 269 aa12.8□□□□□ -0.36
LRPPRC-208ENST00000472420 MYO5CQ9NQX4 1742 aa12.79□□□□□ -0.36
LRPPRC-208ENST00000472420 CDK13Q14004 1512 aaKnown RBP12.78□□□□□ -0.36
LRPPRC-208ENST00000472420 MED14O60244 1454 aa12.78□□□□□ -0.36
LRPPRC-208ENST00000472420 RXRBP28702 533 aa12.77□□□□□ -0.37
LRPPRC-208ENST00000472420 NPHP4O75161 1426 aaPredicted RBP12.77□□□□□ -0.37
LRPPRC-208ENST00000472420 ANKLE2Q86XL3 938 aa12.76□□□□□ -0.37
LRPPRC-208ENST00000472420 DEPDC5O75140 1603 aa12.76□□□□□ -0.37
LRPPRC-208ENST00000472420 IQGAP1P46940 1657 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms