RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 IGF1RP08069 1367 aa9.07□□□□□ -0.96
HDAC8-216ENST00000470998 PRG4Q92954 1404 aaPredicted RBP9.05□□□□□ -0.96
HDAC8-216ENST00000470998 KIAA0586Q9BVV6 1533 aa9.05□□□□□ -0.96
HDAC8-216ENST00000470998 ERCC6L2Q5T890 1561 aa9.04□□□□□ -0.96
HDAC8-216ENST00000470998 PCDHB13Q9Y5F0 798 aa9.04□□□□□ -0.96
HDAC8-216ENST00000470998 GABBR2O75899 941 aa9.03□□□□□ -0.96
HDAC8-216ENST00000470998 CARMIL1Q5VZK9 1371 aa9.02□□□□□ -0.97
HDAC8-216ENST00000470998 CUL7Q14999 1698 aa9.02□□□□□ -0.97
HDAC8-216ENST00000470998 MAP3K13O43283 966 aa9.02□□□□□ -0.97
HDAC8-216ENST00000470998 KIF12Q96FN5 646 aa9.02□□□□□ -0.97
HDAC8-216ENST00000470998 RUSC2Q8N2Y8 1516 aa9.01□□□□□ -0.97
HDAC8-216ENST00000470998 ECM2O94769 699 aaPredicted RBP9.01□□□□□ -0.97
HDAC8-216ENST00000470998 MS4A3Q96HJ5 214 aa9□□□□□ -0.97
HDAC8-216ENST00000470998 SGIP1Q9BQI5 828 aa9□□□□□ -0.97
HDAC8-216ENST00000470998 AMER1Q5JTC6 1135 aaPredicted RBP8.99□□□□□ -0.97
HDAC8-216ENST00000470998 ZNF467Q7Z7K2 595 aaPredicted RBP8.99□□□□□ -0.97
HDAC8-216ENST00000470998 GALR2O43603 387 aaPredicted RBP8.98□□□□□ -0.97
HDAC8-216ENST00000470998 CHRM1P11229 460 aaPredicted RBP8.98□□□□□ -0.97
HDAC8-216ENST00000470998 DCBLD2Q96PD2 775 aa8.98□□□□□ -0.97
HDAC8-216ENST00000470998 CARMIL2Q6F5E8 1435 aa8.97□□□□□ -0.97
HDAC8-216ENST00000470998 PKD2Q13563 968 aa8.95□□□□□ -0.98
HDAC8-216ENST00000470998 TNIKQ9UKE5 1360 aa8.95□□□□□ -0.98
HDAC8-216ENST00000470998 PTPRGP23470 1445 aa8.95□□□□□ -0.98
HDAC8-216ENST00000470998 MAPKBP1O60336 1514 aa8.95□□□□□ -0.98
HDAC8-216ENST00000470998 IFNL1Q8IU54 200 aa8.94□□□□□ -0.98
HDAC8-216ENST00000470998 TAOK2Q9UL54 1235 aa8.94□□□□□ -0.98
HDAC8-216ENST00000470998 ABCC10Q5T3U5 1492 aa8.94□□□□□ -0.98
HDAC8-216ENST00000470998 RAPGEF2Q9Y4G8 1499 aa8.94□□□□□ -0.98
HDAC8-216ENST00000470998 LOC105371045A0A1W2PR82 267 aa8.93□□□□□ -0.98
HDAC8-216ENST00000470998 PCDHB8Q9UN66 801 aa8.93□□□□□ -0.98
HDAC8-216ENST00000470998 FAM69CQ0P6D2 419 aa8.92□□□□□ -0.98
HDAC8-216ENST00000470998 RIOK3O14730 519 aaKnown RBP8.91□□□□□ -0.98
HDAC8-216ENST00000470998 IQGAP2Q13576 1575 aa8.9□□□□□ -0.98
HDAC8-216ENST00000470998 ADCY10Q96PN6 1610 aa8.9□□□□□ -0.99
HDAC8-216ENST00000470998 UHRF1BP1LA0JNW5 1464 aa8.89□□□□□ -0.99
HDAC8-216ENST00000470998 GOLGA3Q08378 1498 aa8.89□□□□□ -0.99
HDAC8-216ENST00000470998 TIE1P35590 1138 aa8.89□□□□□ -0.99
HDAC8-216ENST00000470998 UGGT2Q9NYU1 1516 aa8.89□□□□□ -0.99
HDAC8-216ENST00000470998 UACAQ9BZF9 1416 aa8.88□□□□□ -0.99
HDAC8-216ENST00000470998 PDAP1Q13442 181 aaKnown RBP8.88□□□□□ -0.99
HDAC8-216ENST00000470998 RTN4Q9NQC3 1192 aaKnown RBP8.88□□□□□ -0.99
HDAC8-216ENST00000470998 ABCC2Q92887 1545 aa8.88□□□□□ -0.99
HDAC8-216ENST00000470998 DISP1Q96F81 1524 aa8.87□□□□□ -0.99
HDAC8-216ENST00000470998 VGFO15240 615 aaPredicted RBP8.87□□□□□ -0.99
HDAC8-216ENST00000470998 GOLGA2Q08379 1002 aa8.87□□□□□ -0.99
HDAC8-216ENST00000470998 TRIM26Q12899 539 aaPredicted RBP8.87□□□□□ -0.99
HDAC8-216ENST00000470998 TMEM106CQ9BVX2 250 aa8.87□□□□□ -0.99
HDAC8-216ENST00000470998 PLB1Q6P1J6 1458 aa8.87□□□□□ -0.99
HDAC8-216ENST00000470998 KIF21BO75037 1637 aa8.87□□□□□ -0.99
HDAC8-216ENST00000470998 DIP2BQ9P265 1576 aa8.86□□□□□ -0.99
HDAC8-216ENST00000470998 PRXQ9BXM0 1461 aa8.86□□□□□ -0.99
HDAC8-216ENST00000470998 RGL2O15211 777 aa8.86□□□□□ -0.99
HDAC8-216ENST00000470998 PSEN1P49768 467 aa8.86□□□□□ -0.99
HDAC8-216ENST00000470998 FAM9AQ8IZU1 332 aaPredicted RBP8.85□□□□□ -0.99
HDAC8-216ENST00000470998 TRPC6Q9Y210 931 aa8.85□□□□□ -0.99
HDAC8-216ENST00000470998 KIF13AQ9H1H9 1805 aa8.84□□□□□ -0.99
HDAC8-216ENST00000470998 ASXL2Q76L83 1435 aa8.84□□□□□ -0.99
HDAC8-216ENST00000470998 RNF25Q96BH1 459 aaPredicted RBP8.84□□□□□ -0.99
HDAC8-216ENST00000470998 BMP2KQ9NSY1 1161 aaPredicted RBP8.84□□□□□ -0.99
HDAC8-216ENST00000470998 TTBK1Q5TCY1 1321 aaPredicted RBP8.83□□□□□ -1
HDAC8-216ENST00000470998 TTLL13PA6NNM8 815 aa8.83□□□□□ -1
HDAC8-216ENST00000470998 KDM5BQ9UGL1 1544 aa8.83□□□□□ -1
HDAC8-216ENST00000470998 KIAA0556O60303 1618 aa8.83□□□□□ -1
HDAC8-216ENST00000470998 GLI2P10070 1586 aa8.82□□□□□ -1
HDAC8-216ENST00000470998 CEP162Q5TB80 1403 aa8.82□□□□□ -1
HDAC8-216ENST00000470998 ASTLQ6HA08 431 aaPredicted RBP8.82□□□□□ -1
HDAC8-216ENST00000470998 ATMINO43313 823 aaPredicted RBP8.81□□□□□ -1
HDAC8-216ENST00000470998 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.8□□□□□ -1
HDAC8-216ENST00000470998 STK25O00506 426 aa8.8□□□□□ -1
HDAC8-216ENST00000470998 ATN1P54259 1190 aaPredicted RBP8.8□□□□□ -1
HDAC8-216ENST00000470998 ZFP91Q96JP5 570 aaPredicted RBP8.8□□□□□ -1
HDAC8-216ENST00000470998 TRIM35Q9UPQ4 493 aa8.8□□□□□ -1
HDAC8-216ENST00000470998 HRCP23327 699 aa8.79□□□□□ -1
HDAC8-216ENST00000470998 PCGF6Q9BYE7 350 aa8.79□□□□□ -1
HDAC8-216ENST00000470998 EPRSP07814 1512 aaKnown RBP8.79□□□□□ -1
HDAC8-216ENST00000470998 MKRN3Q13064 507 aaKnown RBP8.78□□□□□ -1
HDAC8-216ENST00000470998 STK24Q9Y6E0 443 aa8.78□□□□□ -1
HDAC8-216ENST00000470998 KDM6BO15054 1643 aa8.78□□□□□ -1
HDAC8-216ENST00000470998 TEX14Q8IWB6 1497 aa8.77□□□□□ -1
HDAC8-216ENST00000470998 SLC39A7Q92504 469 aa8.77□□□□□ -1.01
HDAC8-216ENST00000470998 CABP2Q9NPB3 220 aa8.77□□□□□ -1.01
HDAC8-216ENST00000470998 CTTNBP2Q8WZ74 1663 aa8.77□□□□□ -1.01
HDAC8-216ENST00000470998 WDR7Q9Y4E6 1490 aa8.77□□□□□ -1.01
HDAC8-216ENST00000470998 POTEIP0CG38 1075 aa8.76□□□□□ -1.01
HDAC8-216ENST00000470998 BCL11BQ9C0K0 894 aaPredicted RBP8.76□□□□□ -1.01
HDAC8-216ENST00000470998 ABCA8O94911 1581 aa8.76□□□□□ -1.01
HDAC8-216ENST00000470998 SEC24BO95487 1268 aa8.75□□□□□ -1.01
HDAC8-216ENST00000470998 ZCCHC11Q5TAX3 1644 aaKnown RBP8.74□□□□□ -1.01
HDAC8-216ENST00000470998 CHGAP10645 457 aaKnown RBP8.74□□□□□ -1.01
HDAC8-216ENST00000470998 METRNQ9UJH8 293 aa8.74□□□□□ -1.01
HDAC8-216ENST00000470998 C7P10643 843 aa8.73□□□□□ -1.01
HDAC8-216ENST00000470998 ZEB1P37275 1124 aaPredicted RBP8.73□□□□□ -1.01
HDAC8-216ENST00000470998 IER5LQ5T953 404 aa8.73□□□□□ -1.01
HDAC8-216ENST00000470998 MAGI3Q5TCQ9 1506 aa8.73□□□□□ -1.01
HDAC8-216ENST00000470998 UBTFP17480 764 aaKnown RBP8.72□□□□□ -1.01
HDAC8-216ENST00000470998 MAP3K4Q9Y6R4 1608 aa8.72□□□□□ -1.01
HDAC8-216ENST00000470998 CLIP1P30622 1438 aa8.71□□□□□ -1.01
HDAC8-216ENST00000470998 CD109Q6YHK3 1445 aa8.71□□□□□ -1.01
HDAC8-216ENST00000470998 PLCG2P16885 1265 aa8.71□□□□□ -1.02
HDAC8-216ENST00000470998 PELP1Q8IZL8 1130 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms