RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-210ENST00000469565 TTC37Q6PGP7 1564 aa21.21■□□□□ 0.99
LMNA-210ENST00000469565 SUPT6HQ7KZ85 1726 aaKnown RBP21.21■□□□□ 0.99
LMNA-210ENST00000469565 MYO5CQ9NQX4 1742 aa21.17■□□□□ 0.98
LMNA-210ENST00000469565 RAPGEF3O95398 923 aa21.16■□□□□ 0.98
LMNA-210ENST00000469565 NCOA2Q15596 1464 aa21.14■□□□□ 0.98
LMNA-210ENST00000469565 CCNB3Q8WWL7 1395 aa21.14■□□□□ 0.98
LMNA-210ENST00000469565 ARID4BQ4LE39 1312 aaPredicted RBP21.14■□□□□ 0.97
LMNA-210ENST00000469565 BCORL1Q5H9F3 1711 aa21.12■□□□□ 0.97
LMNA-210ENST00000469565 CDC42BPAQ5VT25 1732 aa21.12■□□□□ 0.97
LMNA-210ENST00000469565 NEO1Q92859 1461 aa21.11■□□□□ 0.97
LMNA-210ENST00000469565 PLCH2O75038 1416 aa21.11■□□□□ 0.97
LMNA-210ENST00000469565 CDC42BPBQ9Y5S2 1711 aa21.1■□□□□ 0.97
LMNA-210ENST00000469565 ARHGAP5Q13017 1502 aa21.09■□□□□ 0.97
LMNA-210ENST00000469565 MADDQ8WXG6 1647 aa21.09■□□□□ 0.97
LMNA-210ENST00000469565 ZNF777Q9ULD5 760 aaPredicted RBP21.09■□□□□ 0.97
LMNA-210ENST00000469565 LMTK3Q96Q04 1460 aa21.08■□□□□ 0.97
LMNA-210ENST00000469565 EFCAB2Q5VUJ9 269 aa21.08■□□□□ 0.97
LMNA-210ENST00000469565 CFDP1Q9UEE9 299 aaPredicted RBP21.08■□□□□ 0.97
LMNA-210ENST00000469565 PREX2Q70Z35 1606 aa21.07■□□□□ 0.96
LMNA-210ENST00000469565 GPATCH8Q9UKJ3 1502 aaKnown RBP21.07■□□□□ 0.96
LMNA-210ENST00000469565 FANCAO15360 1455 aa21.07■□□□□ 0.96
LMNA-210ENST00000469565 ITSN2Q9NZM3 1697 aa21.06■□□□□ 0.96
LMNA-210ENST00000469565 FRMPD1Q5SYB0 1578 aa21.03■□□□□ 0.96
LMNA-210ENST00000469565 CFAP74Q9C0B2 1584 aa21.03■□□□□ 0.96
LMNA-210ENST00000469565 RIMS1Q86UR5 1692 aaKnown RBP21.01■□□□□ 0.95
LMNA-210ENST00000469565 AKNAQ7Z591 1439 aa21.01■□□□□ 0.95
LMNA-210ENST00000469565 MYOM3Q5VTT5 1437 aa21■□□□□ 0.95
LMNA-210ENST00000469565 HSPA2P54652 639 aa20.99■□□□□ 0.95
LMNA-210ENST00000469565 ZNF644Q9H582 1327 aaPredicted RBP20.97■□□□□ 0.95
LMNA-210ENST00000469565 DENND4BO75064 1496 aaPredicted RBP20.96■□□□□ 0.95
LMNA-210ENST00000469565 ARHGEF40Q8TER5 1519 aa20.96■□□□□ 0.95
LMNA-210ENST00000469565 PLPPR3Q6T4P5 718 aa20.96■□□□□ 0.95
LMNA-210ENST00000469565 POGZQ7Z3K3 1410 aa20.95■□□□□ 0.95
LMNA-210ENST00000469565 CERKQ8TCT0 537 aa20.95■□□□□ 0.94
LMNA-210ENST00000469565 SCAPERQ9BY12 1400 aa20.95■□□□□ 0.94
LMNA-210ENST00000469565 SAMD9LQ8IVG5 1584 aa20.94■□□□□ 0.94
LMNA-210ENST00000469565 HNRNPMP52272 730 aaKnown RBP eCLIP20.93■□□□□ 0.94
LMNA-210ENST00000469565 RICTORQ6R327 1708 aa20.92■□□□□ 0.94
LMNA-210ENST00000469565 MIA2Q96PC5 1412 aa20.92■□□□□ 0.94
LMNA-210ENST00000469565 FAM50AQ14320 339 aaKnown RBP20.91■□□□□ 0.94
LMNA-210ENST00000469565 FGD6Q6ZV73 1430 aa20.91■□□□□ 0.94
LMNA-210ENST00000469565 PTPN23Q9H3S7 1636 aa20.91■□□□□ 0.94
LMNA-210ENST00000469565 CAMSAP2Q08AD1 1489 aa20.9■□□□□ 0.94
LMNA-210ENST00000469565 ABCC1P33527 1531 aa20.89■□□□□ 0.94
LMNA-210ENST00000469565 PLEKHH2Q8IVE3 1493 aa20.89■□□□□ 0.94
LMNA-210ENST00000469565 MYT1LQ9UL68 1186 aa20.89■□□□□ 0.93
LMNA-210ENST00000469565 SYCP2Q9BX26 1530 aa20.88■□□□□ 0.93
LMNA-210ENST00000469565 ARHGEF12Q9NZN5 1544 aa20.88■□□□□ 0.93
LMNA-210ENST00000469565 AFAP1Q8N556 730 aa20.86■□□□□ 0.93
LMNA-210ENST00000469565 KIAA1107Q9UPP5 1409 aa20.86■□□□□ 0.93
LMNA-210ENST00000469565 ZFYVE16Q7Z3T8 1539 aa20.85■□□□□ 0.93
LMNA-210ENST00000469565 MLECQ14165 292 aa20.85■□□□□ 0.93
LMNA-210ENST00000469565 TRAPPC8Q9Y2L5 1435 aa20.85■□□□□ 0.93
LMNA-210ENST00000469565 ZMYM4Q5VZL5 1548 aa20.84■□□□□ 0.93
LMNA-210ENST00000469565 MAGI2Q86UL8 1455 aa20.83■□□□□ 0.93
LMNA-210ENST00000469565 YEATS2Q9ULM3 1422 aa20.82■□□□□ 0.92
LMNA-210ENST00000469565 ZNF518AQ6AHZ1 1483 aa20.81■□□□□ 0.92
LMNA-210ENST00000469565 SIGLEC1Q9BZZ2 1709 aa20.81■□□□□ 0.92
LMNA-210ENST00000469565 FER1L4A9Z1Z3 1794 aa20.81■□□□□ 0.92
LMNA-210ENST00000469565 TCOF1Q13428 1488 aaKnown RBP20.81■□□□□ 0.92
LMNA-210ENST00000469565 RSPH4AQ5TD94 716 aa20.8■□□□□ 0.92
LMNA-210ENST00000469565 ITGAEP38570 1179 aa20.79■□□□□ 0.92
LMNA-210ENST00000469565 DISP3Q9P2K9 1392 aa20.79■□□□□ 0.92
LMNA-210ENST00000469565 MBD5Q9P267 1494 aa20.79■□□□□ 0.92
LMNA-210ENST00000469565 TSPY4P0CV99 314 aa20.78■□□□□ 0.92
LMNA-210ENST00000469565 TSPY10P0CW01 314 aa20.78■□□□□ 0.92
LMNA-210ENST00000469565 SPAG9O60271 1321 aaKnown RBP20.78■□□□□ 0.92
LMNA-210ENST00000469565 CCDC141Q6ZP82 1450 aa20.77■□□□□ 0.92
LMNA-210ENST00000469565 ARHGEF5Q12774 1597 aa20.76■□□□□ 0.91
LMNA-210ENST00000469565 DMRT2Q9Y5R5 561 aa20.76■□□□□ 0.91
LMNA-210ENST00000469565 RRBP1Q9P2E9 1410 aaKnown RBP20.76■□□□□ 0.91
LMNA-210ENST00000469565 SOCS7O14512 581 aa20.75■□□□□ 0.91
LMNA-210ENST00000469565 ILDR2Q71H61 639 aa20.75■□□□□ 0.91
LMNA-210ENST00000469565 PREX1Q8TCU6 1659 aa20.74■□□□□ 0.91
LMNA-210ENST00000469565 KDM5CP41229 1560 aa20.74■□□□□ 0.91
LMNA-210ENST00000469565 CHIC2Q9UKJ5 165 aa20.73■□□□□ 0.91
LMNA-210ENST00000469565 DNMT1P26358 1616 aaKnown RBP20.73■□□□□ 0.91
LMNA-210ENST00000469565 ATP10AO60312 1499 aa20.73■□□□□ 0.91
LMNA-210ENST00000469565 ABCC5O15440 1437 aa20.72■□□□□ 0.91
LMNA-210ENST00000469565 DAPK1P53355 1430 aa20.72■□□□□ 0.91
LMNA-210ENST00000469565 KIDINS220Q9ULH0 1771 aa20.71■□□□□ 0.91
LMNA-210ENST00000469565 CEBPAP49715 358 aaPredicted RBP20.7■□□□□ 0.9
LMNA-210ENST00000469565 CROCC2H7BZ55 1655 aa20.7■□□□□ 0.9
LMNA-210ENST00000469565 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.7■□□□□ 0.9
LMNA-210ENST00000469565 C9orf84Q5VXU9 1444 aa20.7■□□□□ 0.9
LMNA-210ENST00000469565 MLH3Q9UHC1 1453 aa20.69■□□□□ 0.9
LMNA-210ENST00000469565 ATP7AQ04656 1500 aa20.68■□□□□ 0.9
LMNA-210ENST00000469565 STRCQ7RTU9 1775 aa20.67■□□□□ 0.9
LMNA-210ENST00000469565 INO80Q9ULG1 1556 aaPredicted RBP20.66■□□□□ 0.9
LMNA-210ENST00000469565 RTEL1-TNFRSF6BF6WH68 1400 aa20.65■□□□□ 0.9
LMNA-210ENST00000469565 UHRF1BP1Q6BDS2 1440 aa20.65■□□□□ 0.9
LMNA-210ENST00000469565 ABCA6Q8N139 1617 aa20.64■□□□□ 0.9
LMNA-210ENST00000469565 MAST1Q9Y2H9 1570 aa20.63■□□□□ 0.89
LMNA-210ENST00000469565 RRP7BPQ9NSQ0 103 aa20.63■□□□□ 0.89
LMNA-210ENST00000469565 DIP2CQ9Y2E4 1556 aa20.63■□□□□ 0.89
LMNA-210ENST00000469565 SHANK2Q9UPX8 1470 aa20.62■□□□□ 0.89
LMNA-210ENST00000469565 PTPRKQ15262 1439 aa20.62■□□□□ 0.89
LMNA-210ENST00000469565 ADGBQ8N7X0 1667 aa20.61■□□□□ 0.89
LMNA-210ENST00000469565 SETD1BQ9UPS6 1966 aaKnown RBP20.61■□□□□ 0.89
LMNA-210ENST00000469565 ANKRD30AQ9BXX3 1397 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms