RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 WASHC2AQ641Q2 1341 aa24.95■■□□□ 1.58
MCF2L-221ENST00000469415 GRIN2AQ12879 1464 aa24.95■■□□□ 1.58
MCF2L-221ENST00000469415 WDR62O43379 1518 aa24.94■■□□□ 1.58
MCF2L-221ENST00000469415 NUP153P49790 1475 aaKnown RBP24.94■■□□□ 1.58
MCF2L-221ENST00000469415 C11orf95C9JLR9 678 aaPredicted RBP24.94■■□□□ 1.58
MCF2L-221ENST00000469415 HNRNPUQ00839 825 aaKnown RBP eCLIP24.94■■□□□ 1.58
MCF2L-221ENST00000469415 NBPF8Q3BBV2 869 aa24.94■■□□□ 1.58
MCF2L-221ENST00000469415 IRX6P78412 446 aaPredicted RBP24.91■■□□□ 1.58
MCF2L-221ENST00000469415 DENND4BO75064 1496 aaPredicted RBP24.91■■□□□ 1.58
MCF2L-221ENST00000469415 ARHGEF11O15085 1522 aa24.9■■□□□ 1.58
MCF2L-221ENST00000469415 ABCC5O15440 1437 aa24.89■■□□□ 1.58
MCF2L-221ENST00000469415 DAPK1P53355 1430 aa24.89■■□□□ 1.57
MCF2L-221ENST00000469415 PLEKHD1A6NEE1 506 aa24.88■■□□□ 1.57
MCF2L-221ENST00000469415 CCDC184Q52MB2 194 aa24.88■■□□□ 1.57
MCF2L-221ENST00000469415 MIA2Q96PC5 1412 aa24.87■■□□□ 1.57
MCF2L-221ENST00000469415 EIF4G3O43432 1585 aaKnown RBP24.86■■□□□ 1.57
MCF2L-221ENST00000469415 FAM9BQ8IZU0 186 aa24.86■■□□□ 1.57
MCF2L-221ENST00000469415 TCOF1Q13428 1488 aaKnown RBP24.85■■□□□ 1.57
MCF2L-221ENST00000469415 NEFLP07196 543 aa24.85■■□□□ 1.57
MCF2L-221ENST00000469415 PKD2Q13563 968 aa24.84■■□□□ 1.57
MCF2L-221ENST00000469415 KDM2AQ9Y2K7 1162 aa24.84■■□□□ 1.57
MCF2L-221ENST00000469415 CCER2I3L3R5 266 aa24.84■■□□□ 1.57
MCF2L-221ENST00000469415 KIAA0556O60303 1618 aa24.84■■□□□ 1.57
MCF2L-221ENST00000469415 HNRNPMP52272 730 aaKnown RBP eCLIP24.83■■□□□ 1.57
MCF2L-221ENST00000469415 KDM5BQ9UGL1 1544 aa24.77■■□□□ 1.56
MCF2L-221ENST00000469415 ANKRD30BQ9BXX2 1392 aa24.76■■□□□ 1.55
MCF2L-221ENST00000469415 TROQ12816 1431 aaPredicted RBP24.75■■□□□ 1.55
MCF2L-221ENST00000469415 CARMIL2Q6F5E8 1435 aa24.75■■□□□ 1.55
MCF2L-221ENST00000469415 RAPGEF6Q8TEU7 1601 aa24.74■■□□□ 1.55
MCF2L-221ENST00000469415 CEP170Q5SW79 1584 aa24.73■■□□□ 1.55
MCF2L-221ENST00000469415 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.73■■□□□ 1.552e-8■□□□□ 8.9
MCF2L-221ENST00000469415 TSPY4P0CV99 314 aa24.73■■□□□ 1.55
MCF2L-221ENST00000469415 TSPY10P0CW01 314 aa24.73■■□□□ 1.55
MCF2L-221ENST00000469415 SYNJ2O15056 1496 aa24.73■■□□□ 1.55
MCF2L-221ENST00000469415 MRS2Q9HD23 443 aa24.72■■□□□ 1.55
MCF2L-221ENST00000469415 TSHZ2Q9NRE2 1034 aa24.71■■□□□ 1.55
MCF2L-221ENST00000469415 CAMSAP2Q08AD1 1489 aa24.7■■□□□ 1.54
MCF2L-221ENST00000469415 GPATCH8Q9UKJ3 1502 aaKnown RBP24.7■■□□□ 1.54
MCF2L-221ENST00000469415 NUP155O75694 1391 aa24.69■■□□□ 1.54
MCF2L-221ENST00000469415 KIF14Q15058 1648 aa24.67■■□□□ 1.54
MCF2L-221ENST00000469415 AKNAQ7Z591 1439 aa24.67■■□□□ 1.54
MCF2L-221ENST00000469415 NCOA1Q15788 1441 aa24.66■■□□□ 1.54
MCF2L-221ENST00000469415 MAGI1Q96QZ7 1491 aaPredicted RBP24.66■■□□□ 1.54
MCF2L-221ENST00000469415 RGL3Q3MIN7 710 aa24.66■■□□□ 1.54
MCF2L-221ENST00000469415 KIF7Q2M1P5 1343 aa24.66■■□□□ 1.54
MCF2L-221ENST00000469415 ROCK1Q13464 1354 aa24.65■■□□□ 1.54
MCF2L-221ENST00000469415 GCC2Q8IWJ2 1684 aa24.64■■□□□ 1.54
MCF2L-221ENST00000469415 CCDC7Q96M83 1385 aa24.63■■□□□ 1.53
MCF2L-221ENST00000469415 ANKRD30AQ9BXX3 1397 aa24.63■■□□□ 1.53
MCF2L-221ENST00000469415 PRKRIP1Q9H875 184 aaPredicted RBP24.62■■□□□ 1.53
MCF2L-221ENST00000469415 DCAF11Q8TEB1 546 aa24.6■■□□□ 1.53
MCF2L-221ENST00000469415 RPRD2Q5VT52 1461 aaKnown RBP24.6■■□□□ 1.53
MCF2L-221ENST00000469415 PTPRGP23470 1445 aa24.6■■□□□ 1.53
MCF2L-221ENST00000469415 ANKRD50Q9ULJ7 1429 aa24.6■■□□□ 1.53
MCF2L-221ENST00000469415 DNMT1P26358 1616 aaKnown RBP24.58■■□□□ 1.53
MCF2L-221ENST00000469415 ATP10BO94823 1461 aa24.58■■□□□ 1.53
MCF2L-221ENST00000469415 CARD11Q9BXL7 1154 aa24.56■■□□□ 1.52
MCF2L-221ENST00000469415 PZPP20742 1482 aa24.56■■□□□ 1.52
MCF2L-221ENST00000469415 CNTLNQ9NXG0 1405 aa24.54■■□□□ 1.52
MCF2L-221ENST00000469415 NUP160Q12769 1436 aa24.53■■□□□ 1.52
MCF2L-221ENST00000469415 TEX14Q8IWB6 1497 aa24.51■■□□□ 1.51
MCF2L-221ENST00000469415 C9orf84Q5VXU9 1444 aa24.51■■□□□ 1.51
MCF2L-221ENST00000469415 USP47Q96K76 1375 aa24.5■■□□□ 1.51
MCF2L-221ENST00000469415 KIAA1107Q9UPP5 1409 aa24.49■■□□□ 1.51
MCF2L-221ENST00000469415 KIF15Q9NS87 1388 aa24.49■■□□□ 1.51
MCF2L-221ENST00000469415 ST20-MTHFSA0A0A6YYL1 179 aa24.48■■□□□ 1.51
MCF2L-221ENST00000469415 SALL2Q9Y467 1007 aaPredicted RBP24.46■■□□□ 1.51
MCF2L-221ENST00000469415 MYT1LQ9UL68 1186 aa24.43■■□□□ 1.5
MCF2L-221ENST00000469415 NBPF1Q3BBV0 1214 aa24.38■■□□□ 1.49
MCF2L-221ENST00000469415 SPATA31E1Q6ZUB1 1445 aa24.37■■□□□ 1.49
MCF2L-221ENST00000469415 ABCC10Q5T3U5 1492 aa24.35■■□□□ 1.49
MCF2L-221ENST00000469415 B4GALNT3Q6L9W6 998 aa24.34■■□□□ 1.49
MCF2L-221ENST00000469415 TMC1Q8TDI8 760 aa24.34■■□□□ 1.49
MCF2L-221ENST00000469415 ITSN2Q9NZM3 1697 aa24.33■■□□□ 1.49
MCF2L-221ENST00000469415 ABCA8O94911 1581 aa24.33■■□□□ 1.49
MCF2L-221ENST00000469415 BCL11AQ9H165 835 aa24.32■■□□□ 1.48
MCF2L-221ENST00000469415 RBM19Q9Y4C8 960 aaKnown RBP24.31■■□□□ 1.48
MCF2L-221ENST00000469415 ROCK2O75116 1388 aaKnown RBP24.3■■□□□ 1.48
MCF2L-221ENST00000469415 ADGRL2O95490 1459 aa24.29■■□□□ 1.48
MCF2L-221ENST00000469415 CDC42BPAQ5VT25 1732 aa24.28■■□□□ 1.48
MCF2L-221ENST00000469415 ERCC6L2Q5T890 1561 aa24.28■■□□□ 1.48
MCF2L-221ENST00000469415 ARHGAP5Q13017 1502 aa24.26■■□□□ 1.47
MCF2L-221ENST00000469415 AFAP1Q8N556 730 aa24.26■■□□□ 1.47
MCF2L-221ENST00000469415 MBD5Q9P267 1494 aa24.25■■□□□ 1.47
MCF2L-221ENST00000469415 CC2D1BQ5T0F9 858 aaKnown RBP24.24■■□□□ 1.47
MCF2L-221ENST00000469415 DHX29Q7Z478 1369 aaKnown RBP24.23■■□□□ 1.47
MCF2L-221ENST00000469415 CCDC144AA2RUR9 1427 aa24.21■■□□□ 1.47
MCF2L-221ENST00000469415 SYCP2Q9BX26 1530 aa24.21■■□□□ 1.47
MCF2L-221ENST00000469415 ZBED9Q6R2W3 1325 aa24.21■■□□□ 1.47
MCF2L-221ENST00000469415 CCDC141Q6ZP82 1450 aa24.2■■□□□ 1.47
MCF2L-221ENST00000469415 ADGBQ8N7X0 1667 aa24.2■■□□□ 1.46
MCF2L-221ENST00000469415 PLEKHH2Q8IVE3 1493 aa24.2■■□□□ 1.46
MCF2L-221ENST00000469415 BCORL1Q5H9F3 1711 aa24.19■■□□□ 1.46
MCF2L-221ENST00000469415 ADCY10Q96PN6 1610 aa24.18■■□□□ 1.46
MCF2L-221ENST00000469415 SAMD9LQ8IVG5 1584 aa24.16■■□□□ 1.46
MCF2L-221ENST00000469415 EFCAB2Q5VUJ9 269 aa24.16■■□□□ 1.46
MCF2L-221ENST00000469415 RSPH4AQ5TD94 716 aa24.14■■□□□ 1.46
MCF2L-221ENST00000469415 SENP3Q9H4L4 574 aaPredicted RBP24.14■■□□□ 1.46
MCF2L-221ENST00000469415 CROCC2H7BZ55 1655 aa24.14■■□□□ 1.45
MCF2L-221ENST00000469415 PNISRQ8TF01 805 aaKnown RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 228.7 ms