RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 PLCH2O75038 1416 aa19.4■□□□□ 0.7
RUNX1-213ENST00000469087 PREX2Q70Z35 1606 aa19.39■□□□□ 0.69
RUNX1-213ENST00000469087 ABCA9Q8IUA7 1624 aa19.39■□□□□ 0.69
RUNX1-213ENST00000469087 MYO5CQ9NQX4 1742 aa19.38■□□□□ 0.69
RUNX1-213ENST00000469087 CAMSAP2Q08AD1 1489 aa19.36■□□□□ 0.69
RUNX1-213ENST00000469087 PTPRKQ15262 1439 aa19.35■□□□□ 0.69
RUNX1-213ENST00000469087 ARHGAP5Q13017 1502 aa19.35■□□□□ 0.69
RUNX1-213ENST00000469087 EFCAB2Q5VUJ9 269 aa19.34■□□□□ 0.69
RUNX1-213ENST00000469087 SAMD9LQ8IVG5 1584 aa19.32■□□□□ 0.68
RUNX1-213ENST00000469087 HNRNPMP52272 730 aaKnown RBP eCLIP19.32■□□□□ 0.68
RUNX1-213ENST00000469087 CD109Q6YHK3 1445 aa19.31■□□□□ 0.68
RUNX1-213ENST00000469087 ARAP3Q8WWN8 1544 aa19.3■□□□□ 0.68
RUNX1-213ENST00000469087 FAM69CQ0P6D2 419 aa19.3■□□□□ 0.68
RUNX1-213ENST00000469087 ABCC5O15440 1437 aa19.3■□□□□ 0.68
RUNX1-213ENST00000469087 DAPK1P53355 1430 aa19.29■□□□□ 0.68
RUNX1-213ENST00000469087 CHIC2Q9UKJ5 165 aa19.29■□□□□ 0.68
RUNX1-213ENST00000469087 DNMT1P26358 1616 aaKnown RBP19.29■□□□□ 0.68
RUNX1-213ENST00000469087 GLI2P10070 1586 aa19.28■□□□□ 0.68
RUNX1-213ENST00000469087 MBD5Q9P267 1494 aa19.27■□□□□ 0.68
RUNX1-213ENST00000469087 FANCAO15360 1455 aa19.27■□□□□ 0.67
RUNX1-213ENST00000469087 DIP2BQ9P265 1576 aa19.26■□□□□ 0.67
RUNX1-213ENST00000469087 KIAA1107Q9UPP5 1409 aa19.25■□□□□ 0.67
RUNX1-213ENST00000469087 ARHGEF12Q9NZN5 1544 aa19.24■□□□□ 0.67
RUNX1-213ENST00000469087 MAP3K4Q9Y6R4 1608 aa19.24■□□□□ 0.67
RUNX1-213ENST00000469087 RSPH4AQ5TD94 716 aa19.24■□□□□ 0.67
RUNX1-213ENST00000469087 PLEKHH2Q8IVE3 1493 aa19.24■□□□□ 0.67
RUNX1-213ENST00000469087 SYCP2Q9BX26 1530 aa19.23■□□□□ 0.67
RUNX1-213ENST00000469087 ARHGEF5Q12774 1597 aa19.22■□□□□ 0.67
RUNX1-213ENST00000469087 RRP7BPQ9NSQ0 103 aa19.21■□□□□ 0.67
RUNX1-213ENST00000469087 TSPY4P0CV99 314 aa19.21■□□□□ 0.67
RUNX1-213ENST00000469087 TSPY10P0CW01 314 aa19.21■□□□□ 0.67
RUNX1-213ENST00000469087 ABCC1P33527 1531 aa19.21■□□□□ 0.67
RUNX1-213ENST00000469087 AKNAQ7Z591 1439 aa19.2■□□□□ 0.66
RUNX1-213ENST00000469087 SETD5Q9C0A6 1442 aa19.2■□□□□ 0.66
RUNX1-213ENST00000469087 KIF13AQ9H1H9 1805 aa19.2■□□□□ 0.66
RUNX1-213ENST00000469087 CROCC2H7BZ55 1655 aa19.19■□□□□ 0.66
RUNX1-213ENST00000469087 CCDC141Q6ZP82 1450 aa19.19■□□□□ 0.66
RUNX1-213ENST00000469087 HFM1A2PYH4 1435 aa19.18■□□□□ 0.66
RUNX1-213ENST00000469087 TRAPPC8Q9Y2L5 1435 aa19.18■□□□□ 0.66
RUNX1-213ENST00000469087 ROCK1Q13464 1354 aa19.18■□□□□ 0.66
RUNX1-213ENST00000469087 NAIPQ13075 1403 aa19.17■□□□□ 0.66
RUNX1-213ENST00000469087 AFAP1Q8N556 730 aa19.17■□□□□ 0.66
RUNX1-213ENST00000469087 SCAPERQ9BY12 1400 aa19.17■□□□□ 0.66
RUNX1-213ENST00000469087 RAB3GAP2Q9H2M9 1393 aa19.17■□□□□ 0.66
RUNX1-213ENST00000469087 ADGRL1O94910 1474 aa19.17■□□□□ 0.66
RUNX1-213ENST00000469087 NCOA1Q15788 1441 aa19.16■□□□□ 0.66
RUNX1-213ENST00000469087 C9orf84Q5VXU9 1444 aa19.15■□□□□ 0.66
RUNX1-213ENST00000469087 SHANK2Q9UPX8 1470 aa19.15■□□□□ 0.66
RUNX1-213ENST00000469087 TSPOAP1O95153 1857 aa19.15■□□□□ 0.66
RUNX1-213ENST00000469087 NEO1Q92859 1461 aa19.14■□□□□ 0.65
RUNX1-213ENST00000469087 CFAP74Q9C0B2 1584 aa19.14■□□□□ 0.65
RUNX1-213ENST00000469087 ADGRL2O95490 1459 aa19.13■□□□□ 0.65
RUNX1-213ENST00000469087 HRCP23327 699 aa19.13■□□□□ 0.65
RUNX1-213ENST00000469087 PPRC1Q5VV67 1664 aaKnown RBP19.13■□□□□ 0.65
RUNX1-213ENST00000469087 ANKRD30AQ9BXX3 1397 aa19.12■□□□□ 0.65
RUNX1-213ENST00000469087 ADGBQ8N7X0 1667 aa19.11■□□□□ 0.65
RUNX1-213ENST00000469087 MAST1Q9Y2H9 1570 aa19.09■□□□□ 0.65
RUNX1-213ENST00000469087 GCC2Q8IWJ2 1684 aa19.09■□□□□ 0.65
RUNX1-213ENST00000469087 SPAG9O60271 1321 aaKnown RBP19.08■□□□□ 0.64
RUNX1-213ENST00000469087 KDM6BO15054 1643 aa19.07■□□□□ 0.64
RUNX1-213ENST00000469087 TRHP20396 242 aaPredicted RBP19.07■□□□□ 0.64
RUNX1-213ENST00000469087 RAPGEF3O95398 923 aa19.06■□□□□ 0.64
RUNX1-213ENST00000469087 CCER1Q8TC90 406 aaPredicted RBP19.06■□□□□ 0.64
RUNX1-213ENST00000469087 TEX14Q8IWB6 1497 aa19.06■□□□□ 0.64
RUNX1-213ENST00000469087 RTEL1-TNFRSF6BF6WH68 1400 aa19.05■□□□□ 0.64
RUNX1-213ENST00000469087 ZNF518AQ6AHZ1 1483 aa19.05■□□□□ 0.64
RUNX1-213ENST00000469087 DENND4BO75064 1496 aaPredicted RBP19.04■□□□□ 0.64
RUNX1-213ENST00000469087 POGZQ7Z3K3 1410 aa19.04■□□□□ 0.64
RUNX1-213ENST00000469087 KIF15Q9NS87 1388 aa19.04■□□□□ 0.64
RUNX1-213ENST00000469087 ANKRD50Q9ULJ7 1429 aa19.02■□□□□ 0.63
RUNX1-213ENST00000469087 DHX57Q6P158 1386 aaKnown RBP19.02■□□□□ 0.63
RUNX1-213ENST00000469087 MYT1LQ9UL68 1186 aa19.01■□□□□ 0.63
RUNX1-213ENST00000469087 PLXNC1O60486 1568 aa19.01■□□□□ 0.63
RUNX1-213ENST00000469087 ZFYVE16Q7Z3T8 1539 aa19.01■□□□□ 0.63
RUNX1-213ENST00000469087 KDM5CP41229 1560 aa19■□□□□ 0.63
RUNX1-213ENST00000469087 INO80Q9ULG1 1556 aaPredicted RBP19■□□□□ 0.63
RUNX1-213ENST00000469087 ATP7AQ04656 1500 aa19■□□□□ 0.63
RUNX1-213ENST00000469087 RICTORQ6R327 1708 aa18.99■□□□□ 0.63
RUNX1-213ENST00000469087 KIDINS220Q9ULH0 1771 aa18.98■□□□□ 0.63
RUNX1-213ENST00000469087 TRIM52Q96A61 297 aa18.98■□□□□ 0.63
RUNX1-213ENST00000469087 MLH3Q9UHC1 1453 aa18.98■□□□□ 0.63
RUNX1-213ENST00000469087 COL17A1Q9UMD9 1497 aaPredicted RBP18.97■□□□□ 0.63
RUNX1-213ENST00000469087 DUOX2Q9NRD8 1548 aa18.95■□□□□ 0.62
RUNX1-213ENST00000469087 FRMPD1Q5SYB0 1578 aa18.95■□□□□ 0.62
RUNX1-213ENST00000469087 HECW2Q9P2P5 1572 aa18.93■□□□□ 0.62
RUNX1-213ENST00000469087 ACIN1Q9UKV3 1341 aaKnown RBP18.93■□□□□ 0.62
RUNX1-213ENST00000469087 DHX29Q7Z478 1369 aaKnown RBP18.91■□□□□ 0.62
RUNX1-213ENST00000469087 ERBINQ96RT1 1412 aa18.9■□□□□ 0.62
RUNX1-213ENST00000469087 MPHOSPH9Q99550 1183 aa18.89■□□□□ 0.61
RUNX1-213ENST00000469087 YEATS2Q9ULM3 1422 aa18.88■□□□□ 0.61
RUNX1-213ENST00000469087 ZMYM4Q5VZL5 1548 aa18.88■□□□□ 0.61
RUNX1-213ENST00000469087 ABCA6Q8N139 1617 aa18.87■□□□□ 0.61
RUNX1-213ENST00000469087 NUP155O75694 1391 aa18.87■□□□□ 0.61
RUNX1-213ENST00000469087 A2MP01023 1474 aa18.86■□□□□ 0.61
RUNX1-213ENST00000469087 CLSPNQ9HAW4 1339 aa18.86■□□□□ 0.61
RUNX1-213ENST00000469087 SLC4A1APQ9BWU0 796 aaKnown RBP18.86■□□□□ 0.61
RUNX1-213ENST00000469087 MAGI2Q86UL8 1455 aa18.85■□□□□ 0.61
RUNX1-213ENST00000469087 KIF3BO15066 747 aa18.85■□□□□ 0.61
RUNX1-213ENST00000469087 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.85■□□□□ 0.61
RUNX1-213ENST00000469087 DIP2CQ9Y2E4 1556 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms