RNA–Protein interactions for RNA: ENST00000468965.2

SCAP-210, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-210ENST00000468965 ARHGAP5Q13017 1502 aa20.35■□□□□ 0.85
SCAP-210ENST00000468965 TEX14Q8IWB6 1497 aa20.35■□□□□ 0.85
SCAP-210ENST00000468965 CFAP74Q9C0B2 1584 aa20.34■□□□□ 0.85
SCAP-210ENST00000468965 FANCAO15360 1455 aa20.34■□□□□ 0.85
SCAP-210ENST00000468965 MYOM3Q5VTT5 1437 aa20.33■□□□□ 0.84
SCAP-210ENST00000468965 NEO1Q92859 1461 aa20.31■□□□□ 0.84
SCAP-210ENST00000468965 SAMD9LQ8IVG5 1584 aa20.31■□□□□ 0.84
SCAP-210ENST00000468965 AKNAQ7Z591 1439 aa20.28■□□□□ 0.84
SCAP-210ENST00000468965 EFCAB2Q5VUJ9 269 aa20.28■□□□□ 0.84
SCAP-210ENST00000468965 CFDP1Q9UEE9 299 aaPredicted RBP20.28■□□□□ 0.84
SCAP-210ENST00000468965 ABCC1P33527 1531 aa20.27■□□□□ 0.83
SCAP-210ENST00000468965 FGD6Q6ZV73 1430 aa20.26■□□□□ 0.83
SCAP-210ENST00000468965 MIA2Q96PC5 1412 aa20.26■□□□□ 0.83
SCAP-210ENST00000468965 PTPN23Q9H3S7 1636 aa20.25■□□□□ 0.83
SCAP-210ENST00000468965 CAMSAP2Q08AD1 1489 aa20.24■□□□□ 0.83
SCAP-210ENST00000468965 ZNF777Q9ULD5 760 aaPredicted RBP20.24■□□□□ 0.83
SCAP-210ENST00000468965 ZNF644Q9H582 1327 aaPredicted RBP20.24■□□□□ 0.83
SCAP-210ENST00000468965 ADGRL1O94910 1474 aa20.24■□□□□ 0.83
SCAP-210ENST00000468965 COL17A1Q9UMD9 1497 aaPredicted RBP20.24■□□□□ 0.83
SCAP-210ENST00000468965 SYCP2Q9BX26 1530 aa20.22■□□□□ 0.83
SCAP-210ENST00000468965 ARHGEF12Q9NZN5 1544 aa20.22■□□□□ 0.83
SCAP-210ENST00000468965 RICTORQ6R327 1708 aa20.22■□□□□ 0.83
SCAP-210ENST00000468965 KDM6BO15054 1643 aa20.22■□□□□ 0.83
SCAP-210ENST00000468965 TCOF1Q13428 1488 aaKnown RBP20.21■□□□□ 0.83
SCAP-210ENST00000468965 FRMPD1Q5SYB0 1578 aa20.21■□□□□ 0.83
SCAP-210ENST00000468965 SCAPERQ9BY12 1400 aa20.2■□□□□ 0.82
SCAP-210ENST00000468965 PLEKHH2Q8IVE3 1493 aa20.19■□□□□ 0.82
SCAP-210ENST00000468965 KIAA1107Q9UPP5 1409 aa20.18■□□□□ 0.82
SCAP-210ENST00000468965 DENND4BO75064 1496 aaPredicted RBP20.18■□□□□ 0.82
SCAP-210ENST00000468965 TRAPPC8Q9Y2L5 1435 aa20.17■□□□□ 0.82
SCAP-210ENST00000468965 MBD5Q9P267 1494 aa20.17■□□□□ 0.82
SCAP-210ENST00000468965 POGZQ7Z3K3 1410 aa20.16■□□□□ 0.82
SCAP-210ENST00000468965 RRBP1Q9P2E9 1410 aaKnown RBP20.16■□□□□ 0.82
SCAP-210ENST00000468965 HNRNPMP52272 730 aaKnown RBP eCLIP20.15■□□□□ 0.82
SCAP-210ENST00000468965 ARHGEF5Q12774 1597 aa20.15■□□□□ 0.82
SCAP-210ENST00000468965 KDM5CP41229 1560 aa20.13■□□□□ 0.81
SCAP-210ENST00000468965 RAPGEF3O95398 923 aa20.13■□□□□ 0.81
SCAP-210ENST00000468965 ZNF518AQ6AHZ1 1483 aa20.12■□□□□ 0.81
SCAP-210ENST00000468965 CROCC2H7BZ55 1655 aa20.12■□□□□ 0.81
SCAP-210ENST00000468965 DNMT1P26358 1616 aaKnown RBP20.12■□□□□ 0.81
SCAP-210ENST00000468965 ZMYM4Q5VZL5 1548 aa20.11■□□□□ 0.81
SCAP-210ENST00000468965 CCDC141Q6ZP82 1450 aa20.1■□□□□ 0.81
SCAP-210ENST00000468965 FAM50AQ14320 339 aaKnown RBP20.09■□□□□ 0.81
SCAP-210ENST00000468965 AFAP1Q8N556 730 aa20.09■□□□□ 0.81
SCAP-210ENST00000468965 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.08■□□□□ 0.8
SCAP-210ENST00000468965 KIDINS220Q9ULH0 1771 aa20.07■□□□□ 0.8
SCAP-210ENST00000468965 HECW2Q9P2P5 1572 aa20.07■□□□□ 0.8
SCAP-210ENST00000468965 ABCC5O15440 1437 aa20.06■□□□□ 0.8
SCAP-210ENST00000468965 DAPK1P53355 1430 aa20.06■□□□□ 0.8
SCAP-210ENST00000468965 INO80Q9ULG1 1556 aaPredicted RBP20.06■□□□□ 0.8
SCAP-210ENST00000468965 MAST1Q9Y2H9 1570 aa20.04■□□□□ 0.8
SCAP-210ENST00000468965 ZFYVE16Q7Z3T8 1539 aa20.03■□□□□ 0.8
SCAP-210ENST00000468965 RSPH4AQ5TD94 716 aa20.03■□□□□ 0.8
SCAP-210ENST00000468965 MLH3Q9UHC1 1453 aa20.03■□□□□ 0.8
SCAP-210ENST00000468965 ATP7AQ04656 1500 aa20.02■□□□□ 0.8
SCAP-210ENST00000468965 SHANK2Q9UPX8 1470 aa20.02■□□□□ 0.8
SCAP-210ENST00000468965 ABCA6Q8N139 1617 aa20.02■□□□□ 0.79
SCAP-210ENST00000468965 ARHGEF40Q8TER5 1519 aa20.02■□□□□ 0.79
SCAP-210ENST00000468965 PTPRKQ15262 1439 aa20.01■□□□□ 0.79
SCAP-210ENST00000468965 YEATS2Q9ULM3 1422 aa20.01■□□□□ 0.79
SCAP-210ENST00000468965 SPAG9O60271 1321 aaKnown RBP20.01■□□□□ 0.79
SCAP-210ENST00000468965 MAGI2Q86UL8 1455 aa20■□□□□ 0.79
SCAP-210ENST00000468965 C9orf84Q5VXU9 1444 aa20■□□□□ 0.79
SCAP-210ENST00000468965 ADGBQ8N7X0 1667 aa20■□□□□ 0.79
SCAP-210ENST00000468965 DIP2CQ9Y2E4 1556 aa20■□□□□ 0.79
SCAP-210ENST00000468965 RTEL1-TNFRSF6BF6WH68 1400 aa19.98■□□□□ 0.79
SCAP-210ENST00000468965 PLXNC1O60486 1568 aa19.96■□□□□ 0.79
SCAP-210ENST00000468965 TSPY4P0CV99 314 aa19.96■□□□□ 0.79
SCAP-210ENST00000468965 TSPY10P0CW01 314 aa19.96■□□□□ 0.79
SCAP-210ENST00000468965 ADGRL2O95490 1459 aa19.94■□□□□ 0.78
SCAP-210ENST00000468965 ITGAEP38570 1179 aa19.94■□□□□ 0.78
SCAP-210ENST00000468965 CHIC2Q9UKJ5 165 aa19.94■□□□□ 0.78
SCAP-210ENST00000468965 SIGLEC1Q9BZZ2 1709 aa19.93■□□□□ 0.78
SCAP-210ENST00000468965 MYT1LQ9UL68 1186 aa19.93■□□□□ 0.78
SCAP-210ENST00000468965 ATP10AO60312 1499 aa19.91■□□□□ 0.78
SCAP-210ENST00000468965 NCOA1Q15788 1441 aa19.9■□□□□ 0.78
SCAP-210ENST00000468965 REREQ9P2R6 1566 aa19.9■□□□□ 0.78
SCAP-210ENST00000468965 ANKRD30AQ9BXX3 1397 aa19.88■□□□□ 0.77
SCAP-210ENST00000468965 A2MP01023 1474 aa19.87■□□□□ 0.77
SCAP-210ENST00000468965 ROCK1Q13464 1354 aa19.87■□□□□ 0.77
SCAP-210ENST00000468965 KIF15Q9NS87 1388 aa19.86■□□□□ 0.77
SCAP-210ENST00000468965 RRP7BPQ9NSQ0 103 aa19.85■□□□□ 0.77
SCAP-210ENST00000468965 DUOX2Q9NRD8 1548 aa19.85■□□□□ 0.77
SCAP-210ENST00000468965 GCC2Q8IWJ2 1684 aa19.84■□□□□ 0.77
SCAP-210ENST00000468965 DHX29Q7Z478 1369 aaKnown RBP19.83■□□□□ 0.77
SCAP-210ENST00000468965 BCORL1Q5H9F3 1711 aa19.82■□□□□ 0.76
SCAP-210ENST00000468965 AGLP35573 1532 aa19.82■□□□□ 0.76
SCAP-210ENST00000468965 TRIM26Q12899 539 aaPredicted RBP19.81■□□□□ 0.76
SCAP-210ENST00000468965 EIF2AK4Q9P2K8 1649 aaKnown RBP19.8■□□□□ 0.76
SCAP-210ENST00000468965 NAIPQ13075 1403 aa19.79■□□□□ 0.76
SCAP-210ENST00000468965 HFM1A2PYH4 1435 aa19.78■□□□□ 0.76
SCAP-210ENST00000468965 ERBINQ96RT1 1412 aa19.78■□□□□ 0.76
SCAP-210ENST00000468965 ANKRD50Q9ULJ7 1429 aa19.76■□□□□ 0.75
SCAP-210ENST00000468965 RNF17Q9BXT8 1623 aaKnown RBP19.76■□□□□ 0.75
SCAP-210ENST00000468965 DEPDC5O75140 1603 aa19.73■□□□□ 0.75
SCAP-210ENST00000468965 MROH1Q8NDA8 1641 aa19.73■□□□□ 0.75
SCAP-210ENST00000468965 ARID4BQ4LE39 1312 aaPredicted RBP19.73■□□□□ 0.75
SCAP-210ENST00000468965 KIF3BO15066 747 aa19.72■□□□□ 0.75
SCAP-210ENST00000468965 ADAMTSL3P82987 1691 aa19.71■□□□□ 0.75
SCAP-210ENST00000468965 UNC13BO14795 1591 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms