RNA–Protein interactions for RNA: ENST00000468965.2

SCAP-210, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-210ENST00000468965 NISCHQ9Y2I1 1504 aa31.29■■■□□ 2.6
SCAP-210ENST00000468965 CCDC180Q9P1Z9 1646 aa27.69■■■□□ 2.02
SCAP-210ENST00000468965 ABCC9O60706 1549 aa26.69■■□□□ 1.86
SCAP-210ENST00000468965 ZCCHC6Q5VYS8 1495 aaKnown RBP26.16■■□□□ 1.78
SCAP-210ENST00000468965 DCAF1Q9Y4B6 1507 aa25.9■■□□□ 1.74
SCAP-210ENST00000468965 DCAF8L2P0C7V8 631 aa25.9■■□□□ 1.74
SCAP-210ENST00000468965 NACADO15069 1562 aa25.9■■□□□ 1.74
SCAP-210ENST00000468965 MYO15BQ96JP2 1530 aa25.86■■□□□ 1.73
SCAP-210ENST00000468965 RB1CC1Q8TDY2 1594 aa25.83■■□□□ 1.73
SCAP-210ENST00000468965 UNC13AQ9UPW8 1703 aa25.4■■□□□ 1.66
SCAP-210ENST00000468965 SCRIBQ14160 1630 aa25.3■■□□□ 1.64
SCAP-210ENST00000468965 BICRAQ9NZM4 1560 aa25.1■■□□□ 1.61
SCAP-210ENST00000468965 PABPN1Q86U42 306 aaKnown RBP eCLIP24.98■■□□□ 1.59
SCAP-210ENST00000468965 SHROOM4Q9ULL8 1493 aa24.95■■□□□ 1.58
SCAP-210ENST00000468965 EIF4G1Q04637 1599 aaKnown RBP24.37■■□□□ 1.49
SCAP-210ENST00000468965 CECR2Q9BXF3 1484 aa24.36■■□□□ 1.49
SCAP-210ENST00000468965 SMARCA4P51532 1647 aa24.23■■□□□ 1.47
SCAP-210ENST00000468965 BAZ1AQ9NRL2 1556 aaPredicted RBP24.21■■□□□ 1.47
SCAP-210ENST00000468965 CC2D2AQ9P2K1 1620 aa24.19■■□□□ 1.46
SCAP-210ENST00000468965 DNAJC5BQ9UF47 199 aa24.16■■□□□ 1.46
SCAP-210ENST00000468965 MROH2BQ7Z745 1585 aa24.15■■□□□ 1.46
SCAP-210ENST00000468965 RSF1Q96T23 1441 aaPredicted RBP23.98■■□□□ 1.43
SCAP-210ENST00000468965 PEG3Q9GZU2 1588 aa23.97■■□□□ 1.43
SCAP-210ENST00000468965 ATAD2BQ9ULI0 1458 aa23.96■■□□□ 1.43
SCAP-210ENST00000468965 SMARCA2P51531 1590 aa23.95■■□□□ 1.42
SCAP-210ENST00000468965 WIZO95785 1651 aa23.94■■□□□ 1.42
SCAP-210ENST00000468965 NCAPD3P42695 1498 aa23.87■■□□□ 1.41
SCAP-210ENST00000468965 HMGXB3Q12766 1538 aa23.83■■□□□ 1.41
SCAP-210ENST00000468965 BAZ1BQ9UIG0 1483 aaKnown RBP23.77■■□□□ 1.4
SCAP-210ENST00000468965 TOP2AP11388 1531 aaKnown RBP23.66■■□□□ 1.38
SCAP-210ENST00000468965 SUPT5HO00267 1087 aaKnown RBP23.62■■□□□ 1.37
SCAP-210ENST00000468965 CCDC88BA6NC98 1476 aa23.37■■□□□ 1.33
SCAP-210ENST00000468965 NESP48681 1621 aa23.24■■□□□ 1.31
SCAP-210ENST00000468965 LAMC3Q9Y6N6 1575 aa23.21■■□□□ 1.31
SCAP-210ENST00000468965 CADPSQ9ULU8 1353 aa23.19■■□□□ 1.3
SCAP-210ENST00000468965 CFTRP13569 1480 aa23.16■■□□□ 1.3
SCAP-210ENST00000468965 PRDM2Q13029 1718 aa23.12■■□□□ 1.29
SCAP-210ENST00000468965 KIF21AQ7Z4S6 1674 aa23.03■■□□□ 1.28
SCAP-210ENST00000468965 PDS5BQ9NTI5 1447 aa22.99■■□□□ 1.27
SCAP-210ENST00000468965 FANCD2Q9BXW9 1451 aa22.95■■□□□ 1.26
SCAP-210ENST00000468965 ERCC6Q03468 1493 aa22.93■■□□□ 1.26
SCAP-210ENST00000468965 CEP164Q9UPV0 1460 aa22.87■■□□□ 1.25
SCAP-210ENST00000468965 THOC2Q8NI27 1593 aaKnown RBP22.83■■□□□ 1.25
SCAP-210ENST00000468965 MRC2Q9UBG0 1479 aa22.77■■□□□ 1.24
SCAP-210ENST00000468965 URB2Q14146 1524 aaKnown RBP22.72■■□□□ 1.23
SCAP-210ENST00000468965 WDR62O43379 1518 aa22.7■■□□□ 1.22
SCAP-210ENST00000468965 ABCC8Q09428 1581 aa22.67■■□□□ 1.22
SCAP-210ENST00000468965 DNMBPQ6XZF7 1577 aa22.65■■□□□ 1.22
SCAP-210ENST00000468965 TOPBP1Q92547 1522 aa22.64■■□□□ 1.21
SCAP-210ENST00000468965 CUX1P39880 1505 aa22.63■■□□□ 1.21
SCAP-210ENST00000468965 WRNQ14191 1432 aaPredicted RBP eCLIP22.58■■□□□ 1.21
SCAP-210ENST00000468965 CUX2O14529 1486 aa22.57■■□□□ 1.2
SCAP-210ENST00000468965 SYNJ1O43426 1573 aa22.57■■□□□ 1.2
SCAP-210ENST00000468965 BIVM-ERCC5R4GMW8 1640 aa22.55■■□□□ 1.2
SCAP-210ENST00000468965 TOP2BQ02880 1626 aa22.53■■□□□ 1.2
SCAP-210ENST00000468965 POLA1P09884 1462 aaPredicted RBP22.47■■□□□ 1.19
SCAP-210ENST00000468965 FGD5Q6ZNL6 1462 aa22.47■■□□□ 1.19
SCAP-210ENST00000468965 TARBP1Q13395 1621 aaKnown RBP22.39■■□□□ 1.18
SCAP-210ENST00000468965 RAD54L2Q9Y4B4 1467 aa22.38■■□□□ 1.17
SCAP-210ENST00000468965 IFT140Q96RY7 1462 aa22.37■■□□□ 1.17
SCAP-210ENST00000468965 WDR97A6NE52 1622 aa22.35■■□□□ 1.17
SCAP-210ENST00000468965 SOGA1O94964 1423 aa22.34■■□□□ 1.17
SCAP-210ENST00000468965 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
SCAP-210ENST00000468965 ZNF608Q9ULD9 1512 aaPredicted RBP22.28■■□□□ 1.16
SCAP-210ENST00000468965 ABCA10Q8WWZ4 1543 aa22.27■■□□□ 1.16
SCAP-210ENST00000468965 TRIM41Q8WV44 630 aa22.25■■□□□ 1.15
SCAP-210ENST00000468965 EIF4G3O43432 1585 aaKnown RBP22.23■■□□□ 1.15
SCAP-210ENST00000468965 ABCA5Q8WWZ7 1642 aa22.18■■□□□ 1.14
SCAP-210ENST00000468965 AQRO60306 1485 aaKnown RBP eCLIP22.18■■□□□ 1.142e-9■■■■■ 27.9
SCAP-210ENST00000468965 TDRD9Q8NDG6 1382 aaKnown RBP22.18■■□□□ 1.14
SCAP-210ENST00000468965 PBRM1Q86U86 1689 aa22.13■■□□□ 1.13
SCAP-210ENST00000468965 GAPVD1Q14C86 1478 aa22.11■■□□□ 1.13
SCAP-210ENST00000468965 RUSC2Q8N2Y8 1516 aa22.06■■□□□ 1.12
SCAP-210ENST00000468965 GRIN2BQ13224 1484 aa22.05■■□□□ 1.12
SCAP-210ENST00000468965 KIF27Q86VH2 1401 aa22.05■■□□□ 1.12
SCAP-210ENST00000468965 ERICH3Q5RHP9 1530 aa22.01■■□□□ 1.11
SCAP-210ENST00000468965 SNAPC4Q5SXM2 1469 aa21.99■■□□□ 1.11
SCAP-210ENST00000468965 MAGI1Q96QZ7 1491 aaPredicted RBP21.96■■□□□ 1.11
SCAP-210ENST00000468965 IGF1RP08069 1367 aa21.94■■□□□ 1.1
SCAP-210ENST00000468965 ADAMTS12P58397 1594 aa21.94■■□□□ 1.1
SCAP-210ENST00000468965 CHD1O14646 1710 aa21.92■■□□□ 1.1
SCAP-210ENST00000468965 CUL7Q14999 1698 aa21.91■■□□□ 1.1
SCAP-210ENST00000468965 EEA1Q15075 1411 aa21.89■■□□□ 1.09
SCAP-210ENST00000468965 SYNJ2O15056 1496 aa21.87■■□□□ 1.09
SCAP-210ENST00000468965 FHAD1B1AJZ9 1412 aa21.86■■□□□ 1.09
SCAP-210ENST00000468965 FAM9AQ8IZU1 332 aaPredicted RBP21.82■■□□□ 1.08
SCAP-210ENST00000468965 CARMIL1Q5VZK9 1371 aa21.81■■□□□ 1.08
SCAP-210ENST00000468965 CSRNP3Q8WYN3 585 aa21.79■■□□□ 1.08
SCAP-210ENST00000468965 GRIN2AQ12879 1464 aa21.78■■□□□ 1.08
SCAP-210ENST00000468965 FBLN2P98095 1184 aa21.78■■□□□ 1.08
SCAP-210ENST00000468965 CHMP7Q8WUX9 453 aaPredicted RBP21.78■■□□□ 1.08
SCAP-210ENST00000468965 PRXQ9BXM0 1461 aa21.77■■□□□ 1.07
SCAP-210ENST00000468965 RAPGEF2Q9Y4G8 1499 aa21.73■■□□□ 1.07
SCAP-210ENST00000468965 CEP170Q5SW79 1584 aa21.7■■□□□ 1.06
SCAP-210ENST00000468965 KIF21BO75037 1637 aa21.69■■□□□ 1.06
SCAP-210ENST00000468965 NUP160Q12769 1436 aa21.68■■□□□ 1.06
SCAP-210ENST00000468965 OSCARQ8IYS5 282 aa21.66■■□□□ 1.06
SCAP-210ENST00000468965 CLASP1Q7Z460 1538 aa21.65■■□□□ 1.06
SCAP-210ENST00000468965 CTTNBP2Q8WZ74 1663 aa21.6■■□□□ 1.05
SCAP-210ENST00000468965 GOLGA3Q08378 1498 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms