RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 PREX2Q70Z35 1606 aa22.66■■□□□ 1.22
DDX56-208ENST00000467318 MIA2Q96PC5 1412 aa22.65■■□□□ 1.22
DDX56-208ENST00000467318 PPRC1Q5VV67 1664 aaKnown RBP22.65■■□□□ 1.22
DDX56-208ENST00000467318 TEX14Q8IWB6 1497 aa22.65■■□□□ 1.22
DDX56-208ENST00000467318 ARHGAP5Q13017 1502 aa22.64■■□□□ 1.21
DDX56-208ENST00000467318 CDC42BPBQ9Y5S2 1711 aa22.63■■□□□ 1.21
DDX56-208ENST00000467318 FANCAO15360 1455 aa22.63■■□□□ 1.21
DDX56-208ENST00000467318 NEO1Q92859 1461 aa22.6■■□□□ 1.21
DDX56-208ENST00000467318 FGD6Q6ZV73 1430 aa22.6■■□□□ 1.21
DDX56-208ENST00000467318 ZNF777Q9ULD5 760 aaPredicted RBP22.58■■□□□ 1.21
DDX56-208ENST00000467318 CFAP74Q9C0B2 1584 aa22.58■■□□□ 1.21
DDX56-208ENST00000467318 AKNAQ7Z591 1439 aa22.56■■□□□ 1.2
DDX56-208ENST00000467318 PLEKHH2Q8IVE3 1493 aa22.54■■□□□ 1.2
DDX56-208ENST00000467318 RRBP1Q9P2E9 1410 aaKnown RBP22.54■■□□□ 1.2
DDX56-208ENST00000467318 KIAA1107Q9UPP5 1409 aa22.53■■□□□ 1.2
DDX56-208ENST00000467318 ZNF644Q9H582 1327 aaPredicted RBP22.52■■□□□ 1.2
DDX56-208ENST00000467318 PTPN23Q9H3S7 1636 aa22.52■■□□□ 1.2
DDX56-208ENST00000467318 TCOF1Q13428 1488 aaKnown RBP22.52■■□□□ 1.2
DDX56-208ENST00000467318 SAMD9LQ8IVG5 1584 aa22.52■■□□□ 1.2
DDX56-208ENST00000467318 ADGRL1O94910 1474 aa22.51■■□□□ 1.19
DDX56-208ENST00000467318 CAMSAP2Q08AD1 1489 aa22.51■■□□□ 1.19
DDX56-208ENST00000467318 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.51■■□□□ 1.19
DDX56-208ENST00000467318 RSPH4AQ5TD94 716 aa22.49■■□□□ 1.19
DDX56-208ENST00000467318 FAM50AQ14320 339 aaKnown RBP22.49■■□□□ 1.19
DDX56-208ENST00000467318 SCAPERQ9BY12 1400 aa22.48■■□□□ 1.19
DDX56-208ENST00000467318 ABCC1P33527 1531 aa22.48■■□□□ 1.19
DDX56-208ENST00000467318 HNRNPMP52272 730 aaKnown RBP eCLIP22.46■■□□□ 1.19
DDX56-208ENST00000467318 COL17A1Q9UMD9 1497 aaPredicted RBP22.46■■□□□ 1.19
DDX56-208ENST00000467318 DENND4BO75064 1496 aaPredicted RBP22.44■■□□□ 1.18
DDX56-208ENST00000467318 MBD5Q9P267 1494 aa22.44■■□□□ 1.18
DDX56-208ENST00000467318 SYCP2Q9BX26 1530 aa22.44■■□□□ 1.18
DDX56-208ENST00000467318 ARHGEF12Q9NZN5 1544 aa22.44■■□□□ 1.18
DDX56-208ENST00000467318 ARHGEF5Q12774 1597 aa22.41■■□□□ 1.18
DDX56-208ENST00000467318 ZNF518AQ6AHZ1 1483 aa22.4■■□□□ 1.18
DDX56-208ENST00000467318 POGZQ7Z3K3 1410 aa22.4■■□□□ 1.18
DDX56-208ENST00000467318 RAPGEF3O95398 923 aa22.39■■□□□ 1.18
DDX56-208ENST00000467318 TRAPPC8Q9Y2L5 1435 aa22.39■■□□□ 1.18
DDX56-208ENST00000467318 CCDC141Q6ZP82 1450 aa22.39■■□□□ 1.17
DDX56-208ENST00000467318 AFAP1Q8N556 730 aa22.39■■□□□ 1.17
DDX56-208ENST00000467318 TSPY4P0CV99 314 aa22.38■■□□□ 1.17
DDX56-208ENST00000467318 TSPY10P0CW01 314 aa22.38■■□□□ 1.17
DDX56-208ENST00000467318 DNMT1P26358 1616 aaKnown RBP22.36■■□□□ 1.17
DDX56-208ENST00000467318 ABCC5O15440 1437 aa22.36■■□□□ 1.17
DDX56-208ENST00000467318 DAPK1P53355 1430 aa22.36■■□□□ 1.17
DDX56-208ENST00000467318 KDM6BO15054 1643 aa22.35■■□□□ 1.17
DDX56-208ENST00000467318 FRMPD1Q5SYB0 1578 aa22.34■■□□□ 1.17
DDX56-208ENST00000467318 RICTORQ6R327 1708 aa22.34■■□□□ 1.17
DDX56-208ENST00000467318 TRIM26Q12899 539 aaPredicted RBP22.34■■□□□ 1.17
DDX56-208ENST00000467318 KDM5CP41229 1560 aa22.33■■□□□ 1.17
DDX56-208ENST00000467318 SPAG9O60271 1321 aaKnown RBP22.33■■□□□ 1.16
DDX56-208ENST00000467318 SHANK2Q9UPX8 1470 aa22.31■■□□□ 1.16
DDX56-208ENST00000467318 RTEL1-TNFRSF6BF6WH68 1400 aa22.31■■□□□ 1.16
DDX56-208ENST00000467318 ITGAEP38570 1179 aa22.3■■□□□ 1.16
DDX56-208ENST00000467318 MLH3Q9UHC1 1453 aa22.3■■□□□ 1.16
DDX56-208ENST00000467318 ZMYM4Q5VZL5 1548 aa22.29■■□□□ 1.16
DDX56-208ENST00000467318 MAGI2Q86UL8 1455 aa22.29■■□□□ 1.16
DDX56-208ENST00000467318 C9orf84Q5VXU9 1444 aa22.28■■□□□ 1.16
DDX56-208ENST00000467318 CROCC2H7BZ55 1655 aa22.27■■□□□ 1.16
DDX56-208ENST00000467318 MYT1LQ9UL68 1186 aa22.27■■□□□ 1.16
DDX56-208ENST00000467318 MAST1Q9Y2H9 1570 aa22.27■■□□□ 1.16
DDX56-208ENST00000467318 PTPRKQ15262 1439 aa22.26■■□□□ 1.15
DDX56-208ENST00000467318 HECW2Q9P2P5 1572 aa22.26■■□□□ 1.15
DDX56-208ENST00000467318 CHIC2Q9UKJ5 165 aa22.25■■□□□ 1.15
DDX56-208ENST00000467318 HRCP23327 699 aa22.24■■□□□ 1.15
DDX56-208ENST00000467318 ATP7AQ04656 1500 aa22.24■■□□□ 1.15
DDX56-208ENST00000467318 ZFYVE16Q7Z3T8 1539 aa22.24■■□□□ 1.15
DDX56-208ENST00000467318 ROCK1Q13464 1354 aa22.23■■□□□ 1.15
DDX56-208ENST00000467318 ANKRD30AQ9BXX3 1397 aa22.23■■□□□ 1.15
DDX56-208ENST00000467318 INO80Q9ULG1 1556 aaPredicted RBP22.23■■□□□ 1.15
DDX56-208ENST00000467318 ADGRL2O95490 1459 aa22.22■■□□□ 1.15
DDX56-208ENST00000467318 NCOA1Q15788 1441 aa22.22■■□□□ 1.15
DDX56-208ENST00000467318 KIDINS220Q9ULH0 1771 aa22.22■■□□□ 1.15
DDX56-208ENST00000467318 PCGF6Q9BYE7 350 aa22.21■■□□□ 1.15
DDX56-208ENST00000467318 YEATS2Q9ULM3 1422 aa22.2■■□□□ 1.14
DDX56-208ENST00000467318 PLXNC1O60486 1568 aa22.18■■□□□ 1.14
DDX56-208ENST00000467318 ADGBQ8N7X0 1667 aa22.17■■□□□ 1.14
DDX56-208ENST00000467318 RRP7BPQ9NSQ0 103 aa22.17■■□□□ 1.14
DDX56-208ENST00000467318 KIF15Q9NS87 1388 aa22.16■■□□□ 1.14
DDX56-208ENST00000467318 ATP10AO60312 1499 aa22.14■■□□□ 1.13
DDX56-208ENST00000467318 ARHGEF40Q8TER5 1519 aa22.14■■□□□ 1.13
DDX56-208ENST00000467318 DIP2CQ9Y2E4 1556 aa22.13■■□□□ 1.13
DDX56-208ENST00000467318 ABCA6Q8N139 1617 aa22.13■■□□□ 1.13
DDX56-208ENST00000467318 DHX29Q7Z478 1369 aaKnown RBP22.12■■□□□ 1.13
DDX56-208ENST00000467318 DUOX2Q9NRD8 1548 aa22.12■■□□□ 1.13
DDX56-208ENST00000467318 HFM1A2PYH4 1435 aa22.11■■□□□ 1.13
DDX56-208ENST00000467318 A2MP01023 1474 aa22.11■■□□□ 1.13
DDX56-208ENST00000467318 NAIPQ13075 1403 aa22.09■■□□□ 1.13
DDX56-208ENST00000467318 REREQ9P2R6 1566 aa22.09■■□□□ 1.13
DDX56-208ENST00000467318 ANKRD50Q9ULJ7 1429 aa22.08■■□□□ 1.13
DDX56-208ENST00000467318 SIGLEC1Q9BZZ2 1709 aa22.08■■□□□ 1.12
DDX56-208ENST00000467318 ERBINQ96RT1 1412 aa22.07■■□□□ 1.12
DDX56-208ENST00000467318 SETD5Q9C0A6 1442 aa22.04■■□□□ 1.12
DDX56-208ENST00000467318 GCC2Q8IWJ2 1684 aa22.04■■□□□ 1.12
DDX56-208ENST00000467318 AGLP35573 1532 aa22.02■■□□□ 1.12
DDX56-208ENST00000467318 ACIN1Q9UKV3 1341 aaKnown RBP22.01■■□□□ 1.11
DDX56-208ENST00000467318 KIF3BO15066 747 aa22.01■■□□□ 1.11
DDX56-208ENST00000467318 EIF2AK4Q9P2K8 1649 aaKnown RBP22■■□□□ 1.11
DDX56-208ENST00000467318 ARID4BQ4LE39 1312 aaPredicted RBP21.98■■□□□ 1.11
DDX56-208ENST00000467318 BCORL1Q5H9F3 1711 aa21.97■■□□□ 1.11
DDX56-208ENST00000467318 RAB3GAP2Q9H2M9 1393 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms