RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 L3MBTL2Q969R5 705 aa27.12■■□□□ 1.93
LIMS2-212ENST00000466410 TSHZ2Q9NRE2 1034 aa27.12■■□□□ 1.93
LIMS2-212ENST00000466410 ABCC5O15440 1437 aa27.12■■□□□ 1.93
LIMS2-212ENST00000466410 CEP170Q5SW79 1584 aa27.11■■□□□ 1.93
LIMS2-212ENST00000466410 ROCK1Q13464 1354 aa27.11■■□□□ 1.93
LIMS2-212ENST00000466410 SYNJ2O15056 1496 aa27.11■■□□□ 1.93
LIMS2-212ENST00000466410 RAPGEF6Q8TEU7 1601 aa27.11■■□□□ 1.93
LIMS2-212ENST00000466410 CHMP7Q8WUX9 453 aaPredicted RBP27.1■■□□□ 1.93
LIMS2-212ENST00000466410 DNMT1P26358 1616 aaKnown RBP27.1■■□□□ 1.93
LIMS2-212ENST00000466410 FBLN2P98095 1184 aa27.09■■□□□ 1.93
LIMS2-212ENST00000466410 EIF4G2P78344 907 aaKnown RBP eCLIP27.08■■□□□ 1.93
LIMS2-212ENST00000466410 ANKRD30BQ9BXX2 1392 aa27.05■■□□□ 1.92
LIMS2-212ENST00000466410 CDK11AQ9UQ88 783 aaPredicted RBP27.05■■□□□ 1.92
LIMS2-212ENST00000466410 NEFLP07196 543 aa27.02■■□□□ 1.92
LIMS2-212ENST00000466410 PRG4Q92954 1404 aaPredicted RBP27.01■■□□□ 1.91
LIMS2-212ENST00000466410 RPRD2Q5VT52 1461 aaKnown RBP27.01■■□□□ 1.91
LIMS2-212ENST00000466410 MYT1Q01538 1121 aa27■■□□□ 1.91
LIMS2-212ENST00000466410 SLC4A1APQ9BWU0 796 aaKnown RBP26.99■■□□□ 1.91
LIMS2-212ENST00000466410 NBPF8Q3BBV2 869 aa26.98■■□□□ 1.91
LIMS2-212ENST00000466410 TROQ12816 1431 aaPredicted RBP26.97■■□□□ 1.91
LIMS2-212ENST00000466410 C11orf95C9JLR9 678 aaPredicted RBP26.97■■□□□ 1.91
LIMS2-212ENST00000466410 TEX14Q8IWB6 1497 aa26.96■■□□□ 1.91
LIMS2-212ENST00000466410 NUP160Q12769 1436 aa26.96■■□□□ 1.91
LIMS2-212ENST00000466410 PLB1Q6P1J6 1458 aa26.96■■□□□ 1.91
LIMS2-212ENST00000466410 HNRNPUQ00839 825 aaKnown RBP eCLIP26.94■■□□□ 1.9
LIMS2-212ENST00000466410 CNTLNQ9NXG0 1405 aa26.94■■□□□ 1.9
LIMS2-212ENST00000466410 CFDP1Q9UEE9 299 aaPredicted RBP26.94■■□□□ 1.9
LIMS2-212ENST00000466410 CAMSAP2Q08AD1 1489 aa26.93■■□□□ 1.9
LIMS2-212ENST00000466410 NCOA1Q15788 1441 aa26.92■■□□□ 1.9
LIMS2-212ENST00000466410 CCDC7Q96M83 1385 aa26.91■■□□□ 1.9
LIMS2-212ENST00000466410 GPATCH8Q9UKJ3 1502 aaKnown RBP26.9■■□□□ 1.9
LIMS2-212ENST00000466410 PZPP20742 1482 aa26.89■■□□□ 1.89
LIMS2-212ENST00000466410 KIF14Q15058 1648 aa26.88■■□□□ 1.89
LIMS2-212ENST00000466410 JPH4Q96JJ6 628 aa26.88■■□□□ 1.89
LIMS2-212ENST00000466410 ZNF777Q9ULD5 760 aaPredicted RBP26.88■■□□□ 1.89
LIMS2-212ENST00000466410 ITSN2Q9NZM3 1697 aa26.87■■□□□ 1.89
LIMS2-212ENST00000466410 CCDC184Q52MB2 194 aa26.86■■□□□ 1.89
LIMS2-212ENST00000466410 SPATA31E1Q6ZUB1 1445 aa26.83■■□□□ 1.89
LIMS2-212ENST00000466410 ADCY10Q96PN6 1610 aa26.83■■□□□ 1.89
LIMS2-212ENST00000466410 ADGBQ8N7X0 1667 aa26.82■■□□□ 1.88
LIMS2-212ENST00000466410 PRKRIP1Q9H875 184 aaPredicted RBP26.82■■□□□ 1.88
LIMS2-212ENST00000466410 CARMIL2Q6F5E8 1435 aa26.81■■□□□ 1.88
LIMS2-212ENST00000466410 ADGRL2O95490 1459 aa26.79■■□□□ 1.88
LIMS2-212ENST00000466410 KIF7Q2M1P5 1343 aa26.79■■□□□ 1.88
LIMS2-212ENST00000466410 CROCC2H7BZ55 1655 aa26.78■■□□□ 1.88
LIMS2-212ENST00000466410 KIAA1107Q9UPP5 1409 aa26.76■■□□□ 1.87
LIMS2-212ENST00000466410 ANKRD30AQ9BXX3 1397 aa26.74■■□□□ 1.87
LIMS2-212ENST00000466410 CHD1O14646 1710 aa26.74■■□□□ 1.87
LIMS2-212ENST00000466410 PKD2Q13563 968 aa26.74■■□□□ 1.87
LIMS2-212ENST00000466410 POLR1AO95602 1720 aaPredicted RBP26.73■■□□□ 1.87
LIMS2-212ENST00000466410 MBD5Q9P267 1494 aa26.72■■□□□ 1.87
LIMS2-212ENST00000466410 PLEKHD1A6NEE1 506 aa26.71■■□□□ 1.87
LIMS2-212ENST00000466410 MRS2Q9HD23 443 aa26.71■■□□□ 1.87
LIMS2-212ENST00000466410 ANKRD50Q9ULJ7 1429 aa26.71■■□□□ 1.87
LIMS2-212ENST00000466410 FAM9BQ8IZU0 186 aa26.7■■□□□ 1.87
LIMS2-212ENST00000466410 CDC42BPAQ5VT25 1732 aa26.69■■□□□ 1.86
LIMS2-212ENST00000466410 IRX6P78412 446 aaPredicted RBP26.69■■□□□ 1.86
LIMS2-212ENST00000466410 ABCA8O94911 1581 aa26.68■■□□□ 1.86
LIMS2-212ENST00000466410 ATP10BO94823 1461 aa26.67■■□□□ 1.86
LIMS2-212ENST00000466410 ZNF326Q5BKZ1 582 aaKnown RBP26.67■■□□□ 1.86
LIMS2-212ENST00000466410 ABCC10Q5T3U5 1492 aa26.66■■□□□ 1.86
LIMS2-212ENST00000466410 USP47Q96K76 1375 aa26.63■■□□□ 1.85
LIMS2-212ENST00000466410 C9orf84Q5VXU9 1444 aa26.63■■□□□ 1.85
LIMS2-212ENST00000466410 RBM19Q9Y4C8 960 aaKnown RBP26.62■■□□□ 1.85
LIMS2-212ENST00000466410 NUP155O75694 1391 aa26.61■■□□□ 1.85
LIMS2-212ENST00000466410 BCORL1Q5H9F3 1711 aa26.61■■□□□ 1.85
LIMS2-212ENST00000466410 SHANK2Q9UPX8 1470 aa26.6■■□□□ 1.85
LIMS2-212ENST00000466410 DHX29Q7Z478 1369 aaKnown RBP26.57■■□□□ 1.84
LIMS2-212ENST00000466410 ZBED9Q6R2W3 1325 aa26.57■■□□□ 1.84
LIMS2-212ENST00000466410 TSPY4P0CV99 314 aa26.56■■□□□ 1.84
LIMS2-212ENST00000466410 TSPY10P0CW01 314 aa26.56■■□□□ 1.84
LIMS2-212ENST00000466410 POLR3GLQ9BT43 218 aa26.56■■□□□ 1.84
LIMS2-212ENST00000466410 HNRNPMP52272 730 aaKnown RBP eCLIP26.55■■□□□ 1.84
LIMS2-212ENST00000466410 KDM5CP41229 1560 aa26.55■■□□□ 1.84
LIMS2-212ENST00000466410 PTPRGP23470 1445 aa26.52■■□□□ 1.84
LIMS2-212ENST00000466410 CNGB1Q14028 1251 aaPredicted RBP26.52■■□□□ 1.84
LIMS2-212ENST00000466410 UHRF1BP1Q6BDS2 1440 aa26.52■■□□□ 1.84
LIMS2-212ENST00000466410 KIF15Q9NS87 1388 aa26.51■■□□□ 1.83
LIMS2-212ENST00000466410 KDM5DQ9BY66 1539 aa26.5■■□□□ 1.83
LIMS2-212ENST00000466410 ANP32EQ9BTT0 268 aa26.5■■□□□ 1.83
LIMS2-212ENST00000466410 SHROOM2Q13796 1616 aa26.5■■□□□ 1.83
LIMS2-212ENST00000466410 RALGAPBQ86X10 1494 aa26.49■■□□□ 1.83
LIMS2-212ENST00000466410 ERCC6L2Q5T890 1561 aa26.49■■□□□ 1.83
LIMS2-212ENST00000466410 ERICH6BQ5W0A0 696 aa26.48■■□□□ 1.83
LIMS2-212ENST00000466410 ARHGEF5Q12774 1597 aa26.46■■□□□ 1.83
LIMS2-212ENST00000466410 ARID4BQ4LE39 1312 aaPredicted RBP26.46■■□□□ 1.83
LIMS2-212ENST00000466410 CARD11Q9BXL7 1154 aa26.46■■□□□ 1.83
LIMS2-212ENST00000466410 ARHGEF12Q9NZN5 1544 aa26.46■■□□□ 1.83
LIMS2-212ENST00000466410 KDM2AQ9Y2K7 1162 aa26.46■■□□□ 1.83
LIMS2-212ENST00000466410 PPP4R2Q9NY27 417 aa26.44■■□□□ 1.82
LIMS2-212ENST00000466410 SAMD9LQ8IVG5 1584 aa26.41■■□□□ 1.82
LIMS2-212ENST00000466410 CDC42BPBQ9Y5S2 1711 aa26.41■■□□□ 1.82
LIMS2-212ENST00000466410 DCAF11Q8TEB1 546 aa26.41■■□□□ 1.82
LIMS2-212ENST00000466410 CCDC141Q6ZP82 1450 aa26.4■■□□□ 1.82
LIMS2-212ENST00000466410 ST20-MTHFSA0A0A6YYL1 179 aa26.38■■□□□ 1.81
LIMS2-212ENST00000466410 PREX2Q70Z35 1606 aa26.38■■□□□ 1.81
LIMS2-212ENST00000466410 ROCK2O75116 1388 aaKnown RBP26.37■■□□□ 1.81
LIMS2-212ENST00000466410 FAM135AQ9P2D6 1515 aa26.35■■□□□ 1.81
LIMS2-212ENST00000466410 CLASP1Q7Z460 1538 aa26.32■■□□□ 1.8
LIMS2-212ENST00000466410 RSPH4AQ5TD94 716 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms