RNA–Protein interactions for RNA: ENST00000463426.5

CUL4A-205, Transcript of cullin 4A, humanhuman

TSL 3

Gene CUL4A, Length 893 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-205ENST00000463426 CCNB3Q8WWL7 1395 aa40.68■■■■■ 4.1
CUL4A-205ENST00000463426 FANCAO15360 1455 aa40.66■■■■■ 4.1
CUL4A-205ENST00000463426 ARHGAP5Q13017 1502 aa40.64■■■■■ 4.1
CUL4A-205ENST00000463426 GPATCH8Q9UKJ3 1502 aaKnown RBP40.64■■■■■ 4.1
CUL4A-205ENST00000463426 EFCAB2Q5VUJ9 269 aa40.62■■■■■ 4.09
CUL4A-205ENST00000463426 KDM6BO15054 1643 aa40.56■■■■■ 4.08
CUL4A-205ENST00000463426 AKNAQ7Z591 1439 aa40.54■■■■■ 4.08
CUL4A-205ENST00000463426 CFDP1Q9UEE9 299 aaPredicted RBP40.5■■■■■ 4.07
CUL4A-205ENST00000463426 MYOM3Q5VTT5 1437 aa40.49■■■■■ 4.07
CUL4A-205ENST00000463426 PLEKHH2Q8IVE3 1493 aa40.48■■■■■ 4.07
CUL4A-205ENST00000463426 MIA2Q96PC5 1412 aa40.46■■■■■ 4.07
CUL4A-205ENST00000463426 ADGRL1O94910 1474 aa40.45■■■■■ 4.07
CUL4A-205ENST00000463426 ABCC1P33527 1531 aa40.42■■■■■ 4.06
CUL4A-205ENST00000463426 SAMD9LQ8IVG5 1584 aa40.4■■■■■ 4.06
CUL4A-205ENST00000463426 DENND4BO75064 1496 aaPredicted RBP40.39■■■■■ 4.06
CUL4A-205ENST00000463426 KIAA1107Q9UPP5 1409 aa40.38■■■■■ 4.05
CUL4A-205ENST00000463426 SCAPERQ9BY12 1400 aa40.35■■■■■ 4.05
CUL4A-205ENST00000463426 RICTORQ6R327 1708 aa40.35■■■■■ 4.05
CUL4A-205ENST00000463426 COL17A1Q9UMD9 1497 aaPredicted RBP40.32■■■■■ 4.05
CUL4A-205ENST00000463426 POGZQ7Z3K3 1410 aa40.31■■■■■ 4.04
CUL4A-205ENST00000463426 ZNF518AQ6AHZ1 1483 aa40.3■■■■■ 4.04
CUL4A-205ENST00000463426 CAMSAP2Q08AD1 1489 aa40.29■■■■■ 4.04
CUL4A-205ENST00000463426 FGD6Q6ZV73 1430 aa40.29■■■■■ 4.04
CUL4A-205ENST00000463426 ZNF777Q9ULD5 760 aaPredicted RBP40.29■■■■■ 4.04
CUL4A-205ENST00000463426 SYCP2Q9BX26 1530 aa40.26■■■■■ 4.04
CUL4A-205ENST00000463426 PTPN23Q9H3S7 1636 aa40.26■■■■■ 4.04
CUL4A-205ENST00000463426 FRMPD1Q5SYB0 1578 aa40.26■■■■■ 4.04
CUL4A-205ENST00000463426 ZMYM4Q5VZL5 1548 aa40.25■■■■■ 4.03
CUL4A-205ENST00000463426 RSPH4AQ5TD94 716 aa40.22■■■■■ 4.03
CUL4A-205ENST00000463426 KDM5CP41229 1560 aa40.22■■■■■ 4.03
CUL4A-205ENST00000463426 TCOF1Q13428 1488 aaKnown RBP40.21■■■■■ 4.03
CUL4A-205ENST00000463426 ARHGEF5Q12774 1597 aa40.2■■■■■ 4.03
CUL4A-205ENST00000463426 ARHGEF12Q9NZN5 1544 aa40.2■■■■■ 4.03
CUL4A-205ENST00000463426 MAGI2Q86UL8 1455 aa40.19■■■■■ 4.02
CUL4A-205ENST00000463426 RAPGEF3O95398 923 aa40.16■■■■■ 4.02
CUL4A-205ENST00000463426 MBD5Q9P267 1494 aa40.15■■■■■ 4.02
CUL4A-205ENST00000463426 PPARGC1BQ86YN6 1023 aaKnown RBP40.14■■■■■ 4.02
CUL4A-205ENST00000463426 ZNF644Q9H582 1327 aaPredicted RBP40.14■■■■■ 4.02
CUL4A-205ENST00000463426 CCDC141Q6ZP82 1450 aa40.13■■■■■ 4.01
CUL4A-205ENST00000463426 TRAPPC8Q9Y2L5 1435 aa40.12■■■■■ 4.01
CUL4A-205ENST00000463426 HECW2Q9P2P5 1572 aa40.11■■■■■ 4.01
CUL4A-205ENST00000463426 HNRNPMP52272 730 aaKnown RBP eCLIP40.09■■■■■ 4.011e-8■■■■■ 89.9
CUL4A-205ENST00000463426 MLH3Q9UHC1 1453 aa40.08■■■■■ 4.01
CUL4A-205ENST00000463426 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.08■■■■■ 4.013e-7■□□□□ 8.2
CUL4A-205ENST00000463426 ARHGEF40Q8TER5 1519 aa40.05■■■■■ 4
CUL4A-205ENST00000463426 AFAP1Q8N556 730 aa40.04■■■■■ 4
CUL4A-205ENST00000463426 ZFYVE16Q7Z3T8 1539 aa40.03■■■■■ 4
CUL4A-205ENST00000463426 RRBP1Q9P2E9 1410 aaKnown RBP40.03■■■■■ 4
CUL4A-205ENST00000463426 DNMT1P26358 1616 aaKnown RBP40.02■■■■■ 4
CUL4A-205ENST00000463426 INO80Q9ULG1 1556 aaPredicted RBP40.01■■■■□ 3.99
CUL4A-205ENST00000463426 RTEL1-TNFRSF6BF6WH68 1400 aa39.99■■■■□ 3.99
CUL4A-205ENST00000463426 CROCC2H7BZ55 1655 aa39.99■■■■□ 3.99
CUL4A-205ENST00000463426 MAST1Q9Y2H9 1570 aa39.98■■■■□ 3.99
CUL4A-205ENST00000463426 SPAG9O60271 1321 aaKnown RBP39.98■■■■□ 3.99
CUL4A-205ENST00000463426 SHANK2Q9UPX8 1470 aa39.98■■■■□ 3.99
CUL4A-205ENST00000463426 KIDINS220Q9ULH0 1771 aa39.97■■■■□ 3.99
CUL4A-205ENST00000463426 ATP7AQ04656 1500 aa39.96■■■■□ 3.99
CUL4A-205ENST00000463426 TSPY4P0CV99 314 aa39.95■■■■□ 3.99
CUL4A-205ENST00000463426 TSPY10P0CW01 314 aa39.95■■■■□ 3.99
CUL4A-205ENST00000463426 FAM50AQ14320 339 aaKnown RBP39.93■■■■□ 3.98
CUL4A-205ENST00000463426 DAPK1P53355 1430 aa39.91■■■■□ 3.98
CUL4A-205ENST00000463426 ABCC5O15440 1437 aa39.89■■■■□ 3.98
CUL4A-205ENST00000463426 MYT1LQ9UL68 1186 aa39.88■■■■□ 3.97
CUL4A-205ENST00000463426 REREQ9P2R6 1566 aa39.88■■■■□ 3.97
CUL4A-205ENST00000463426 DIP2CQ9Y2E4 1556 aa39.88■■■■□ 3.97
CUL4A-205ENST00000463426 ABCA6Q8N139 1617 aa39.87■■■■□ 3.97
CUL4A-205ENST00000463426 ADGBQ8N7X0 1667 aa39.86■■■■□ 3.97
CUL4A-205ENST00000463426 C9orf84Q5VXU9 1444 aa39.86■■■■□ 3.97
CUL4A-205ENST00000463426 ATP10AO60312 1499 aa39.86■■■■□ 3.97
CUL4A-205ENST00000463426 YEATS2Q9ULM3 1422 aa39.85■■■■□ 3.97
CUL4A-205ENST00000463426 PLXNC1O60486 1568 aa39.83■■■■□ 3.97
CUL4A-205ENST00000463426 ADGRL2O95490 1459 aa39.74■■■■□ 3.95
CUL4A-205ENST00000463426 ANKRD30AQ9BXX3 1397 aa39.71■■■■□ 3.95
CUL4A-205ENST00000463426 AGLP35573 1532 aa39.7■■■■□ 3.95
CUL4A-205ENST00000463426 A2MP01023 1474 aa39.69■■■■□ 3.94
CUL4A-205ENST00000463426 ROCK1Q13464 1354 aa39.66■■■■□ 3.94
CUL4A-205ENST00000463426 DUOX2Q9NRD8 1548 aa39.65■■■■□ 3.94
CUL4A-205ENST00000463426 NCOA1Q15788 1441 aa39.63■■■■□ 3.93
CUL4A-205ENST00000463426 DHX29Q7Z478 1369 aaKnown RBP39.62■■■■□ 3.93
CUL4A-205ENST00000463426 KIF15Q9NS87 1388 aa39.6■■■■□ 3.93
CUL4A-205ENST00000463426 BCORL1Q5H9F3 1711 aa39.6■■■■□ 3.93
CUL4A-205ENST00000463426 EIF2AK4Q9P2K8 1649 aaKnown RBP39.59■■■■□ 3.93
CUL4A-205ENST00000463426 PTPRKQ15262 1439 aa39.58■■■■□ 3.93
CUL4A-205ENST00000463426 SIGLEC1Q9BZZ2 1709 aa39.57■■■■□ 3.92
CUL4A-205ENST00000463426 ERBINQ96RT1 1412 aa39.55■■■■□ 3.92
CUL4A-205ENST00000463426 CHIC2Q9UKJ5 165 aa39.54■■■■□ 3.92
CUL4A-205ENST00000463426 ARID4BQ4LE39 1312 aaPredicted RBP39.54■■■■□ 3.92
CUL4A-205ENST00000463426 ITGAEP38570 1179 aa39.5■■■■□ 3.91
CUL4A-205ENST00000463426 RRP7BPQ9NSQ0 103 aa39.47■■■■□ 3.91
CUL4A-205ENST00000463426 FAM135AQ9P2D6 1515 aa39.43■■■■□ 3.9
CUL4A-205ENST00000463426 RNF17Q9BXT8 1623 aaKnown RBP39.43■■■■□ 3.9
CUL4A-205ENST00000463426 ADAMTSL3P82987 1691 aa39.42■■■■□ 3.9
CUL4A-205ENST00000463426 GCC2Q8IWJ2 1684 aa39.42■■■■□ 3.9
CUL4A-205ENST00000463426 ANKRD50Q9ULJ7 1429 aa39.4■■■■□ 3.9
CUL4A-205ENST00000463426 PPP6R1Q9UPN7 881 aa39.39■■■■□ 3.9
CUL4A-205ENST00000463426 FER1L4A9Z1Z3 1794 aa39.36■■■■□ 3.89
CUL4A-205ENST00000463426 HFM1A2PYH4 1435 aa39.36■■■■□ 3.89
CUL4A-205ENST00000463426 KIF3BO15066 747 aa39.35■■■■□ 3.89
CUL4A-205ENST00000463426 DEPDC5O75140 1603 aa39.34■■■■□ 3.89
CUL4A-205ENST00000463426 NAIPQ13075 1403 aa39.3■■■■□ 3.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms