RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 CFDP1Q9UEE9 299 aaPredicted RBP22■■□□□ 1.11
COL6A1-202ENST00000463060 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.99■■□□□ 1.11
COL6A1-202ENST00000463060 MAP3K4Q9Y6R4 1608 aa21.99■■□□□ 1.11
COL6A1-202ENST00000463060 TCOF1Q13428 1488 aaKnown RBP21.99■■□□□ 1.11
COL6A1-202ENST00000463060 TRIM26Q12899 539 aaPredicted RBP21.99■■□□□ 1.11
COL6A1-202ENST00000463060 KIF13AQ9H1H9 1805 aa21.99■■□□□ 1.11
COL6A1-202ENST00000463060 ZNF644Q9H582 1327 aaPredicted RBP21.96■■□□□ 1.11
COL6A1-202ENST00000463060 PTPN23Q9H3S7 1636 aa21.95■■□□□ 1.1
COL6A1-202ENST00000463060 EFCAB2Q5VUJ9 269 aa21.94■■□□□ 1.1
COL6A1-202ENST00000463060 ARHGAP5Q13017 1502 aa21.93■■□□□ 1.1
COL6A1-202ENST00000463060 SAMD9LQ8IVG5 1584 aa21.91■■□□□ 1.1
COL6A1-202ENST00000463060 FANCAO15360 1455 aa21.9■■□□□ 1.1
COL6A1-202ENST00000463060 CAMSAP2Q08AD1 1489 aa21.9■■□□□ 1.1
COL6A1-202ENST00000463060 PPRC1Q5VV67 1664 aaKnown RBP21.89■■□□□ 1.1
COL6A1-202ENST00000463060 ZNF777Q9ULD5 760 aaPredicted RBP21.89■■□□□ 1.09
COL6A1-202ENST00000463060 FAM50AQ14320 339 aaKnown RBP21.88■■□□□ 1.09
COL6A1-202ENST00000463060 KIAA1107Q9UPP5 1409 aa21.88■■□□□ 1.09
COL6A1-202ENST00000463060 MBD5Q9P267 1494 aa21.87■■□□□ 1.09
COL6A1-202ENST00000463060 NEO1Q92859 1461 aa21.86■■□□□ 1.09
COL6A1-202ENST00000463060 PLEKHH2Q8IVE3 1493 aa21.85■■□□□ 1.09
COL6A1-202ENST00000463060 AKNAQ7Z591 1439 aa21.85■■□□□ 1.09
COL6A1-202ENST00000463060 ARHGEF12Q9NZN5 1544 aa21.85■■□□□ 1.09
COL6A1-202ENST00000463060 HNRNPMP52272 730 aaKnown RBP eCLIP21.83■■□□□ 1.09
COL6A1-202ENST00000463060 ABCC1P33527 1531 aa21.83■■□□□ 1.09
COL6A1-202ENST00000463060 CFAP74Q9C0B2 1584 aa21.82■■□□□ 1.08
COL6A1-202ENST00000463060 ABCC5O15440 1437 aa21.81■■□□□ 1.08
COL6A1-202ENST00000463060 ARHGEF5Q12774 1597 aa21.81■■□□□ 1.08
COL6A1-202ENST00000463060 PTPRKQ15262 1439 aa21.8■■□□□ 1.08
COL6A1-202ENST00000463060 TSPOAP1O95153 1857 aa21.8■■□□□ 1.08
COL6A1-202ENST00000463060 TEX14Q8IWB6 1497 aa21.8■■□□□ 1.08
COL6A1-202ENST00000463060 RSPH4AQ5TD94 716 aa21.8■■□□□ 1.08
COL6A1-202ENST00000463060 DNMT1P26358 1616 aaKnown RBP21.8■■□□□ 1.08
COL6A1-202ENST00000463060 SYCP2Q9BX26 1530 aa21.8■■□□□ 1.08
COL6A1-202ENST00000463060 ADGRL1O94910 1474 aa21.78■■□□□ 1.08
COL6A1-202ENST00000463060 DAPK1P53355 1430 aa21.78■■□□□ 1.08
COL6A1-202ENST00000463060 SCAPERQ9BY12 1400 aa21.78■■□□□ 1.08
COL6A1-202ENST00000463060 PCGF6Q9BYE7 350 aa21.77■■□□□ 1.08
COL6A1-202ENST00000463060 TRAPPC8Q9Y2L5 1435 aa21.77■■□□□ 1.08
COL6A1-202ENST00000463060 CCDC141Q6ZP82 1450 aa21.74■■□□□ 1.07
COL6A1-202ENST00000463060 ITGAEP38570 1179 aa21.73■■□□□ 1.07
COL6A1-202ENST00000463060 SHANK2Q9UPX8 1470 aa21.71■■□□□ 1.07
COL6A1-202ENST00000463060 AFAP1Q8N556 730 aa21.71■■□□□ 1.07
COL6A1-202ENST00000463060 CROCC2H7BZ55 1655 aa21.71■■□□□ 1.07
COL6A1-202ENST00000463060 DENND4BO75064 1496 aaPredicted RBP21.7■■□□□ 1.06
COL6A1-202ENST00000463060 POGZQ7Z3K3 1410 aa21.69■■□□□ 1.06
COL6A1-202ENST00000463060 COL17A1Q9UMD9 1497 aaPredicted RBP21.69■■□□□ 1.06
COL6A1-202ENST00000463060 MAST1Q9Y2H9 1570 aa21.69■■□□□ 1.06
COL6A1-202ENST00000463060 TSPY4P0CV99 314 aa21.68■■□□□ 1.06
COL6A1-202ENST00000463060 TSPY10P0CW01 314 aa21.68■■□□□ 1.06
COL6A1-202ENST00000463060 ADGRL2O95490 1459 aa21.68■■□□□ 1.06
COL6A1-202ENST00000463060 ZNF518AQ6AHZ1 1483 aa21.68■■□□□ 1.06
COL6A1-202ENST00000463060 C9orf84Q5VXU9 1444 aa21.67■■□□□ 1.06
COL6A1-202ENST00000463060 ROCK1Q13464 1354 aa21.67■■□□□ 1.06
COL6A1-202ENST00000463060 CHIC2Q9UKJ5 165 aa21.67■■□□□ 1.06
COL6A1-202ENST00000463060 RICTORQ6R327 1708 aa21.66■■□□□ 1.06
COL6A1-202ENST00000463060 KDM5CP41229 1560 aa21.66■■□□□ 1.06
COL6A1-202ENST00000463060 RTEL1-TNFRSF6BF6WH68 1400 aa21.66■■□□□ 1.06
COL6A1-202ENST00000463060 NCOA1Q15788 1441 aa21.65■■□□□ 1.06
COL6A1-202ENST00000463060 RAPGEF3O95398 923 aa21.65■■□□□ 1.06
COL6A1-202ENST00000463060 FRMPD1Q5SYB0 1578 aa21.64■■□□□ 1.05
COL6A1-202ENST00000463060 SPAG9O60271 1321 aaKnown RBP21.63■■□□□ 1.05
COL6A1-202ENST00000463060 MLH3Q9UHC1 1453 aa21.62■■□□□ 1.05
COL6A1-202ENST00000463060 HFM1A2PYH4 1435 aa21.61■■□□□ 1.05
COL6A1-202ENST00000463060 INO80Q9ULG1 1556 aaPredicted RBP21.61■■□□□ 1.05
COL6A1-202ENST00000463060 ANKRD30AQ9BXX3 1397 aa21.61■■□□□ 1.05
COL6A1-202ENST00000463060 ADGBQ8N7X0 1667 aa21.6■■□□□ 1.05
COL6A1-202ENST00000463060 NAIPQ13075 1403 aa21.6■■□□□ 1.05
COL6A1-202ENST00000463060 ZMYM4Q5VZL5 1548 aa21.59■■□□□ 1.05
COL6A1-202ENST00000463060 ZFYVE16Q7Z3T8 1539 aa21.59■■□□□ 1.05
COL6A1-202ENST00000463060 KIDINS220Q9ULH0 1771 aa21.59■■□□□ 1.05
COL6A1-202ENST00000463060 RRP7BPQ9NSQ0 103 aa21.58■■□□□ 1.05
COL6A1-202ENST00000463060 PLXNC1O60486 1568 aa21.57■■□□□ 1.04
COL6A1-202ENST00000463060 ATP7AQ04656 1500 aa21.57■■□□□ 1.04
COL6A1-202ENST00000463060 AEBP2Q6ZN18 517 aaPredicted RBP21.56■■□□□ 1.04
COL6A1-202ENST00000463060 SETD5Q9C0A6 1442 aa21.55■■□□□ 1.04
COL6A1-202ENST00000463060 HECW2Q9P2P5 1572 aa21.55■■□□□ 1.04
COL6A1-202ENST00000463060 MAGI2Q86UL8 1455 aa21.54■■□□□ 1.04
COL6A1-202ENST00000463060 KIF15Q9NS87 1388 aa21.53■■□□□ 1.04
COL6A1-202ENST00000463060 HRCP23327 699 aa21.53■■□□□ 1.04
COL6A1-202ENST00000463060 GCC2Q8IWJ2 1684 aa21.52■■□□□ 1.04
COL6A1-202ENST00000463060 KDM6BO15054 1643 aa21.5■■□□□ 1.03
COL6A1-202ENST00000463060 YEATS2Q9ULM3 1422 aa21.49■■□□□ 1.03
COL6A1-202ENST00000463060 DUOX2Q9NRD8 1548 aa21.49■■□□□ 1.03
COL6A1-202ENST00000463060 RAB3GAP2Q9H2M9 1393 aa21.48■■□□□ 1.03
COL6A1-202ENST00000463060 DHX29Q7Z478 1369 aaKnown RBP21.48■■□□□ 1.03
COL6A1-202ENST00000463060 ABCA6Q8N139 1617 aa21.47■■□□□ 1.03
COL6A1-202ENST00000463060 ANKRD50Q9ULJ7 1429 aa21.47■■□□□ 1.03
COL6A1-202ENST00000463060 DIP2CQ9Y2E4 1556 aa21.47■■□□□ 1.03
COL6A1-202ENST00000463060 MYT1LQ9UL68 1186 aa21.45■■□□□ 1.02
COL6A1-202ENST00000463060 A2MP01023 1474 aa21.44■■□□□ 1.02
COL6A1-202ENST00000463060 ERBINQ96RT1 1412 aa21.43■■□□□ 1.02
COL6A1-202ENST00000463060 ATP10AO60312 1499 aa21.43■■□□□ 1.02
COL6A1-202ENST00000463060 REREQ9P2R6 1566 aa21.4■■□□□ 1.02
COL6A1-202ENST00000463060 ARHGEF40Q8TER5 1519 aa21.39■■□□□ 1.02
COL6A1-202ENST00000463060 ACIN1Q9UKV3 1341 aaKnown RBP21.38■■□□□ 1.01
COL6A1-202ENST00000463060 EIF2AK4Q9P2K8 1649 aaKnown RBP21.37■■□□□ 1.01
COL6A1-202ENST00000463060 BCORL1Q5H9F3 1711 aa21.36■■□□□ 1.01
COL6A1-202ENST00000463060 AGLP35573 1532 aa21.34■■□□□ 1.01
COL6A1-202ENST00000463060 KIF3BO15066 747 aa21.32■■□□□ 1
COL6A1-202ENST00000463060 DEPDC5O75140 1603 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms