RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 CDC42BPBQ9Y5S2 1711 aa27.41■■□□□ 1.98
ATPAF2-202ENST00000462733 CFDP1Q9UEE9 299 aaPredicted RBP27.41■■□□□ 1.98
ATPAF2-202ENST00000462733 PLCH2O75038 1416 aa27.4■■□□□ 1.98
ATPAF2-202ENST00000462733 TSPOAP1O95153 1857 aa27.4■■□□□ 1.98
ATPAF2-202ENST00000462733 ARHGAP5Q13017 1502 aa27.39■■□□□ 1.97
ATPAF2-202ENST00000462733 ZNF777Q9ULD5 760 aaPredicted RBP27.38■■□□□ 1.97
ATPAF2-202ENST00000462733 FGD6Q6ZV73 1430 aa27.37■■□□□ 1.97
ATPAF2-202ENST00000462733 MIA2Q96PC5 1412 aa27.34■■□□□ 1.97
ATPAF2-202ENST00000462733 EFCAB2Q5VUJ9 269 aa27.32■■□□□ 1.96
ATPAF2-202ENST00000462733 ARAP3Q8WWN8 1544 aa27.31■■□□□ 1.96
ATPAF2-202ENST00000462733 ZNF644Q9H582 1327 aaPredicted RBP27.31■■□□□ 1.96
ATPAF2-202ENST00000462733 PTPN23Q9H3S7 1636 aa27.31■■□□□ 1.96
ATPAF2-202ENST00000462733 FAM50AQ14320 339 aaKnown RBP27.3■■□□□ 1.96
ATPAF2-202ENST00000462733 FANCAO15360 1455 aa27.3■■□□□ 1.96
ATPAF2-202ENST00000462733 RRBP1Q9P2E9 1410 aaKnown RBP27.29■■□□□ 1.96
ATPAF2-202ENST00000462733 PPRC1Q5VV67 1664 aaKnown RBP27.29■■□□□ 1.96
ATPAF2-202ENST00000462733 SAMD9LQ8IVG5 1584 aa27.27■■□□□ 1.96
ATPAF2-202ENST00000462733 CAMSAP2Q08AD1 1489 aa27.26■■□□□ 1.95
ATPAF2-202ENST00000462733 TCOF1Q13428 1488 aaKnown RBP27.23■■□□□ 1.95
ATPAF2-202ENST00000462733 CFAP74Q9C0B2 1584 aa27.22■■□□□ 1.95
ATPAF2-202ENST00000462733 TEX14Q8IWB6 1497 aa27.22■■□□□ 1.95
ATPAF2-202ENST00000462733 AKNAQ7Z591 1439 aa27.21■■□□□ 1.95
ATPAF2-202ENST00000462733 NEO1Q92859 1461 aa27.2■■□□□ 1.94
ATPAF2-202ENST00000462733 HNRNPMP52272 730 aaKnown RBP eCLIP27.19■■□□□ 1.94
ATPAF2-202ENST00000462733 ADGRL1O94910 1474 aa27.18■■□□□ 1.94
ATPAF2-202ENST00000462733 SYCP2Q9BX26 1530 aa27.18■■□□□ 1.94
ATPAF2-202ENST00000462733 ABCC1P33527 1531 aa27.17■■□□□ 1.94
ATPAF2-202ENST00000462733 PLEKHH2Q8IVE3 1493 aa27.17■■□□□ 1.94
ATPAF2-202ENST00000462733 ITGAEP38570 1179 aa27.16■■□□□ 1.94
ATPAF2-202ENST00000462733 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.15■■□□□ 1.94
ATPAF2-202ENST00000462733 ARHGEF12Q9NZN5 1544 aa27.15■■□□□ 1.94
ATPAF2-202ENST00000462733 SCAPERQ9BY12 1400 aa27.14■■□□□ 1.94
ATPAF2-202ENST00000462733 KIAA1107Q9UPP5 1409 aa27.13■■□□□ 1.93
ATPAF2-202ENST00000462733 MBD5Q9P267 1494 aa27.11■■□□□ 1.93
ATPAF2-202ENST00000462733 DNMT1P26358 1616 aaKnown RBP27.08■■□□□ 1.93
ATPAF2-202ENST00000462733 TRAPPC8Q9Y2L5 1435 aa27.08■■□□□ 1.93
ATPAF2-202ENST00000462733 ARHGEF5Q12774 1597 aa27.07■■□□□ 1.92
ATPAF2-202ENST00000462733 ABCC5O15440 1437 aa27.07■■□□□ 1.92
ATPAF2-202ENST00000462733 DAPK1P53355 1430 aa27.07■■□□□ 1.92
ATPAF2-202ENST00000462733 AFAP1Q8N556 730 aa27.06■■□□□ 1.92
ATPAF2-202ENST00000462733 CCDC141Q6ZP82 1450 aa27.06■■□□□ 1.92
ATPAF2-202ENST00000462733 DENND4BO75064 1496 aaPredicted RBP27.05■■□□□ 1.92
ATPAF2-202ENST00000462733 RAPGEF3O95398 923 aa27.04■■□□□ 1.92
ATPAF2-202ENST00000462733 RSPH4AQ5TD94 716 aa27.04■■□□□ 1.92
ATPAF2-202ENST00000462733 CHIC2Q9UKJ5 165 aa27.02■■□□□ 1.92
ATPAF2-202ENST00000462733 PTPRKQ15262 1439 aa27.02■■□□□ 1.92
ATPAF2-202ENST00000462733 POGZQ7Z3K3 1410 aa27.02■■□□□ 1.92
ATPAF2-202ENST00000462733 TSPY4P0CV99 314 aa27.02■■□□□ 1.92
ATPAF2-202ENST00000462733 TSPY10P0CW01 314 aa27.02■■□□□ 1.92
ATPAF2-202ENST00000462733 CROCC2H7BZ55 1655 aa27.01■■□□□ 1.91
ATPAF2-202ENST00000462733 ZNF518AQ6AHZ1 1483 aa27■■□□□ 1.91
ATPAF2-202ENST00000462733 COL17A1Q9UMD9 1497 aaPredicted RBP27■■□□□ 1.91
ATPAF2-202ENST00000462733 RICTORQ6R327 1708 aa26.99■■□□□ 1.91
ATPAF2-202ENST00000462733 MYT1LQ9UL68 1186 aa26.96■■□□□ 1.91
ATPAF2-202ENST00000462733 C9orf84Q5VXU9 1444 aa26.96■■□□□ 1.91
ATPAF2-202ENST00000462733 SPAG9O60271 1321 aaKnown RBP26.96■■□□□ 1.91
ATPAF2-202ENST00000462733 FRMPD1Q5SYB0 1578 aa26.96■■□□□ 1.91
ATPAF2-202ENST00000462733 SHANK2Q9UPX8 1470 aa26.94■■□□□ 1.9
ATPAF2-202ENST00000462733 KDM6BO15054 1643 aa26.94■■□□□ 1.9
ATPAF2-202ENST00000462733 KDM5CP41229 1560 aa26.93■■□□□ 1.9
ATPAF2-202ENST00000462733 MAST1Q9Y2H9 1570 aa26.91■■□□□ 1.9
ATPAF2-202ENST00000462733 ADGBQ8N7X0 1667 aa26.89■■□□□ 1.9
ATPAF2-202ENST00000462733 RRP7BPQ9NSQ0 103 aa26.89■■□□□ 1.9
ATPAF2-202ENST00000462733 ZFYVE16Q7Z3T8 1539 aa26.88■■□□□ 1.89
ATPAF2-202ENST00000462733 HECW2Q9P2P5 1572 aa26.88■■□□□ 1.89
ATPAF2-202ENST00000462733 ATP7AQ04656 1500 aa26.88■■□□□ 1.89
ATPAF2-202ENST00000462733 INO80Q9ULG1 1556 aaPredicted RBP26.87■■□□□ 1.89
ATPAF2-202ENST00000462733 ANKRD30AQ9BXX3 1397 aa26.87■■□□□ 1.89
ATPAF2-202ENST00000462733 KIDINS220Q9ULH0 1771 aa26.86■■□□□ 1.89
ATPAF2-202ENST00000462733 MLH3Q9UHC1 1453 aa26.86■■□□□ 1.89
ATPAF2-202ENST00000462733 RTEL1-TNFRSF6BF6WH68 1400 aa26.86■■□□□ 1.89
ATPAF2-202ENST00000462733 ADGRL2O95490 1459 aa26.85■■□□□ 1.89
ATPAF2-202ENST00000462733 ZMYM4Q5VZL5 1548 aa26.85■■□□□ 1.89
ATPAF2-202ENST00000462733 NCOA1Q15788 1441 aa26.84■■□□□ 1.89
ATPAF2-202ENST00000462733 ROCK1Q13464 1354 aa26.84■■□□□ 1.89
ATPAF2-202ENST00000462733 KIF15Q9NS87 1388 aa26.81■■□□□ 1.88
ATPAF2-202ENST00000462733 PLXNC1O60486 1568 aa26.8■■□□□ 1.88
ATPAF2-202ENST00000462733 YEATS2Q9ULM3 1422 aa26.8■■□□□ 1.88
ATPAF2-202ENST00000462733 MAGI2Q86UL8 1455 aa26.78■■□□□ 1.88
ATPAF2-202ENST00000462733 ABCA6Q8N139 1617 aa26.78■■□□□ 1.88
ATPAF2-202ENST00000462733 CCER1Q8TC90 406 aaPredicted RBP26.78■■□□□ 1.88
ATPAF2-202ENST00000462733 HFM1A2PYH4 1435 aa26.77■■□□□ 1.88
ATPAF2-202ENST00000462733 NAIPQ13075 1403 aa26.76■■□□□ 1.88
ATPAF2-202ENST00000462733 DIP2CQ9Y2E4 1556 aa26.75■■□□□ 1.87
ATPAF2-202ENST00000462733 GCC2Q8IWJ2 1684 aa26.74■■□□□ 1.87
ATPAF2-202ENST00000462733 SETD5Q9C0A6 1442 aa26.72■■□□□ 1.87
ATPAF2-202ENST00000462733 DUOX2Q9NRD8 1548 aa26.71■■□□□ 1.87
ATPAF2-202ENST00000462733 ARHGEF40Q8TER5 1519 aa26.71■■□□□ 1.87
ATPAF2-202ENST00000462733 ANKRD50Q9ULJ7 1429 aa26.7■■□□□ 1.86
ATPAF2-202ENST00000462733 A2MP01023 1474 aa26.69■■□□□ 1.86
ATPAF2-202ENST00000462733 ATP10AO60312 1499 aa26.68■■□□□ 1.86
ATPAF2-202ENST00000462733 DHX29Q7Z478 1369 aaKnown RBP26.67■■□□□ 1.86
ATPAF2-202ENST00000462733 RAB3GAP2Q9H2M9 1393 aa26.67■■□□□ 1.86
ATPAF2-202ENST00000462733 ERBINQ96RT1 1412 aa26.64■■□□□ 1.85
ATPAF2-202ENST00000462733 KIF3BO15066 747 aa26.6■■□□□ 1.85
ATPAF2-202ENST00000462733 REREQ9P2R6 1566 aa26.58■■□□□ 1.85
ATPAF2-202ENST00000462733 SIGLEC1Q9BZZ2 1709 aa26.57■■□□□ 1.84
ATPAF2-202ENST00000462733 EIF2AK4Q9P2K8 1649 aaKnown RBP26.56■■□□□ 1.84
ATPAF2-202ENST00000462733 ARID4BQ4LE39 1312 aaPredicted RBP26.54■■□□□ 1.84
ATPAF2-202ENST00000462733 TRIM52Q96A61 297 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms