RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 NISCHQ9Y2I1 1504 aa41.98■■■■■ 4.31
ATPAF2-202ENST00000462733 CCDC180Q9P1Z9 1646 aa36.96■■■■□ 3.51
ATPAF2-202ENST00000462733 ABCC9O60706 1549 aa35.64■■■■□ 3.3
ATPAF2-202ENST00000462733 ZCCHC6Q5VYS8 1495 aaKnown RBP35.11■■■■□ 3.21
ATPAF2-202ENST00000462733 DCAF8L2P0C7V8 631 aa34.97■■■■□ 3.19
ATPAF2-202ENST00000462733 DCAF1Q9Y4B6 1507 aa34.68■■■■□ 3.14
ATPAF2-202ENST00000462733 NACADO15069 1562 aa34.6■■■■□ 3.13
ATPAF2-202ENST00000462733 MYO15BQ96JP2 1530 aa34.55■■■■□ 3.12
ATPAF2-202ENST00000462733 RB1CC1Q8TDY2 1594 aa34.49■■■■□ 3.11
ATPAF2-202ENST00000462733 SCRIBQ14160 1630 aa33.91■■■■□ 3.02
ATPAF2-202ENST00000462733 UNC13AQ9UPW8 1703 aa33.78■■■■□ 3
ATPAF2-202ENST00000462733 SHROOM4Q9ULL8 1493 aa33.75■■■□□ 2.99
ATPAF2-202ENST00000462733 PABPN1Q86U42 306 aaKnown RBP eCLIP33.47■■■□□ 2.95
ATPAF2-202ENST00000462733 BICRAQ9NZM4 1560 aa33.44■■■□□ 2.94
ATPAF2-202ENST00000462733 CECR2Q9BXF3 1484 aa32.68■■■□□ 2.82
ATPAF2-202ENST00000462733 EIF4G1Q04637 1599 aaKnown RBP32.51■■■□□ 2.8
ATPAF2-202ENST00000462733 BAZ1AQ9NRL2 1556 aaPredicted RBP32.48■■■□□ 2.79
ATPAF2-202ENST00000462733 SMARCA4P51532 1647 aa32.44■■■□□ 2.78
ATPAF2-202ENST00000462733 MROH2BQ7Z745 1585 aa32.41■■■□□ 2.78
ATPAF2-202ENST00000462733 RSF1Q96T23 1441 aaPredicted RBP32.27■■■□□ 2.76
ATPAF2-202ENST00000462733 CC2D2AQ9P2K1 1620 aa32.23■■■□□ 2.75
ATPAF2-202ENST00000462733 WIZO95785 1651 aa32.12■■■□□ 2.73
ATPAF2-202ENST00000462733 SUPT5HO00267 1087 aaKnown RBP32.11■■■□□ 2.73
ATPAF2-202ENST00000462733 DNAJC5BQ9UF47 199 aa32.09■■■□□ 2.73
ATPAF2-202ENST00000462733 ATAD2BQ9ULI0 1458 aa32.08■■■□□ 2.73
ATPAF2-202ENST00000462733 SMARCA2P51531 1590 aa32.05■■■□□ 2.72
ATPAF2-202ENST00000462733 PEG3Q9GZU2 1588 aa32.05■■■□□ 2.72
ATPAF2-202ENST00000462733 NCAPD3P42695 1498 aa31.92■■■□□ 2.7
ATPAF2-202ENST00000462733 BAZ1BQ9UIG0 1483 aaKnown RBP31.88■■■□□ 2.69
ATPAF2-202ENST00000462733 HMGXB3Q12766 1538 aa31.82■■■□□ 2.68
ATPAF2-202ENST00000462733 TOP2AP11388 1531 aaKnown RBP31.76■■■□□ 2.67
ATPAF2-202ENST00000462733 CCDC88BA6NC98 1476 aa31.42■■■□□ 2.62
ATPAF2-202ENST00000462733 CADPSQ9ULU8 1353 aa31.06■■■□□ 2.56
ATPAF2-202ENST00000462733 NESP48681 1621 aa31.04■■■□□ 2.56
ATPAF2-202ENST00000462733 CFTRP13569 1480 aa31.01■■■□□ 2.55
ATPAF2-202ENST00000462733 LAMC3Q9Y6N6 1575 aa30.98■■■□□ 2.55
ATPAF2-202ENST00000462733 PRDM2Q13029 1718 aa30.84■■■□□ 2.53
ATPAF2-202ENST00000462733 PDS5BQ9NTI5 1447 aa30.76■■■□□ 2.52
ATPAF2-202ENST00000462733 FANCD2Q9BXW9 1451 aa30.73■■■□□ 2.51
ATPAF2-202ENST00000462733 KIF21AQ7Z4S6 1674 aa30.69■■■□□ 2.5
ATPAF2-202ENST00000462733 ERCC6Q03468 1493 aa30.65■■■□□ 2.5
ATPAF2-202ENST00000462733 CEP164Q9UPV0 1460 aa30.62■■■□□ 2.49
ATPAF2-202ENST00000462733 ABCC8Q09428 1581 aa30.53■■■□□ 2.48
ATPAF2-202ENST00000462733 WRNQ14191 1432 aaPredicted RBP eCLIP30.41■■■□□ 2.46
ATPAF2-202ENST00000462733 MRC2Q9UBG0 1479 aa30.41■■■□□ 2.46
ATPAF2-202ENST00000462733 URB2Q14146 1524 aaKnown RBP30.38■■■□□ 2.45
ATPAF2-202ENST00000462733 THOC2Q8NI27 1593 aaKnown RBP30.36■■■□□ 2.45
ATPAF2-202ENST00000462733 CUX1P39880 1505 aa30.35■■■□□ 2.45
ATPAF2-202ENST00000462733 SYNJ1O43426 1573 aa30.32■■■□□ 2.44
ATPAF2-202ENST00000462733 DNMBPQ6XZF7 1577 aa30.32■■■□□ 2.44
ATPAF2-202ENST00000462733 TOPBP1Q92547 1522 aa30.31■■■□□ 2.44
ATPAF2-202ENST00000462733 CHIC1Q5VXU3 224 aa30.3■■■□□ 2.44
ATPAF2-202ENST00000462733 WDR62O43379 1518 aa30.27■■■□□ 2.44
ATPAF2-202ENST00000462733 TOP2BQ02880 1626 aa30.25■■■□□ 2.43
ATPAF2-202ENST00000462733 TRIM41Q8WV44 630 aa30.24■■■□□ 2.43
ATPAF2-202ENST00000462733 BIVM-ERCC5R4GMW8 1640 aa30.23■■■□□ 2.43
ATPAF2-202ENST00000462733 FGD5Q6ZNL6 1462 aa30.14■■■□□ 2.42
ATPAF2-202ENST00000462733 POLA1P09884 1462 aaPredicted RBP30.11■■■□□ 2.41
ATPAF2-202ENST00000462733 CUX2O14529 1486 aa30.01■■■□□ 2.39
ATPAF2-202ENST00000462733 RAD54L2Q9Y4B4 1467 aa30.01■■■□□ 2.39
ATPAF2-202ENST00000462733 SOGA1O94964 1423 aa30■■■□□ 2.39
ATPAF2-202ENST00000462733 IFT140Q96RY7 1462 aa29.93■■■□□ 2.38
ATPAF2-202ENST00000462733 TARBP1Q13395 1621 aaKnown RBP29.91■■■□□ 2.38
ATPAF2-202ENST00000462733 ABCA10Q8WWZ4 1543 aa29.85■■■□□ 2.37
ATPAF2-202ENST00000462733 WDR97A6NE52 1622 aa29.83■■■□□ 2.37
ATPAF2-202ENST00000462733 ZNF608Q9ULD9 1512 aaPredicted RBP29.79■■■□□ 2.36
ATPAF2-202ENST00000462733 TDRD9Q8NDG6 1382 aaKnown RBP29.78■■■□□ 2.36
ATPAF2-202ENST00000462733 RUSC2Q8N2Y8 1516 aa29.73■■■□□ 2.35
ATPAF2-202ENST00000462733 AQRO60306 1485 aaKnown RBP eCLIP29.72■■■□□ 2.35
ATPAF2-202ENST00000462733 KIF27Q86VH2 1401 aa29.71■■■□□ 2.35
ATPAF2-202ENST00000462733 FAM9AQ8IZU1 332 aaPredicted RBP29.68■■■□□ 2.34
ATPAF2-202ENST00000462733 EIF4G3O43432 1585 aaKnown RBP29.68■■■□□ 2.34
ATPAF2-202ENST00000462733 ABCA5Q8WWZ7 1642 aa29.67■■■□□ 2.34
ATPAF2-202ENST00000462733 GAPVD1Q14C86 1478 aa29.66■■■□□ 2.34
ATPAF2-202ENST00000462733 PBRM1Q86U86 1689 aa29.57■■■□□ 2.32
ATPAF2-202ENST00000462733 EEA1Q15075 1411 aa29.56■■■□□ 2.32
ATPAF2-202ENST00000462733 GRIN2BQ13224 1484 aa29.54■■■□□ 2.32
ATPAF2-202ENST00000462733 IGF1RP08069 1367 aa29.51■■■□□ 2.31
ATPAF2-202ENST00000462733 CSRNP3Q8WYN3 585 aa29.5■■■□□ 2.31
ATPAF2-202ENST00000462733 ERICH3Q5RHP9 1530 aa29.49■■■□□ 2.31
ATPAF2-202ENST00000462733 SNAPC4Q5SXM2 1469 aa29.45■■■□□ 2.3
ATPAF2-202ENST00000462733 MAGI1Q96QZ7 1491 aaPredicted RBP29.38■■■□□ 2.29
ATPAF2-202ENST00000462733 CUL7Q14999 1698 aa29.37■■■□□ 2.29
ATPAF2-202ENST00000462733 CARMIL1Q5VZK9 1371 aa29.37■■■□□ 2.29
ATPAF2-202ENST00000462733 ADAMTS12P58397 1594 aa29.35■■■□□ 2.29
ATPAF2-202ENST00000462733 FHAD1B1AJZ9 1412 aa29.32■■■□□ 2.28
ATPAF2-202ENST00000462733 EHMT2Q96KQ7 1210 aa29.31■■■□□ 2.28
ATPAF2-202ENST00000462733 PRXQ9BXM0 1461 aa29.3■■■□□ 2.28
ATPAF2-202ENST00000462733 FBLN2P98095 1184 aa29.29■■■□□ 2.28
ATPAF2-202ENST00000462733 CHMP7Q8WUX9 453 aaPredicted RBP29.26■■■□□ 2.27
ATPAF2-202ENST00000462733 SYNJ2O15056 1496 aa29.26■■■□□ 2.27
ATPAF2-202ENST00000462733 RAPGEF2Q9Y4G8 1499 aa29.25■■■□□ 2.27
ATPAF2-202ENST00000462733 KIF21BO75037 1637 aa29.23■■■□□ 2.27
ATPAF2-202ENST00000462733 CHD1O14646 1710 aa29.2■■■□□ 2.27
ATPAF2-202ENST00000462733 GRIN2AQ12879 1464 aa29.17■■■□□ 2.26
ATPAF2-202ENST00000462733 GOLGA3Q08378 1498 aa29.15■■■□□ 2.26
ATPAF2-202ENST00000462733 LOC105371045A0A1W2PR82 267 aa29.14■■■□□ 2.26
ATPAF2-202ENST00000462733 UBTFP17480 764 aaKnown RBP29.08■■■□□ 2.25
ATPAF2-202ENST00000462733 CEP170Q5SW79 1584 aa29.01■■■□□ 2.24
ATPAF2-202ENST00000462733 NUP160Q12769 1436 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms