RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 PLEKHH2Q8IVE3 1493 aa16.18■□□□□ 0.18
RTF1-202ENST00000462276 KIAA1107Q9UPP5 1409 aa16.18■□□□□ 0.18
RTF1-202ENST00000462276 TCOF1Q13428 1488 aaKnown RBP16.17■□□□□ 0.18
RTF1-202ENST00000462276 ZNF777Q9ULD5 760 aaPredicted RBP16.17■□□□□ 0.18
RTF1-202ENST00000462276 TTC37Q6PGP7 1564 aa16.16■□□□□ 0.18
RTF1-202ENST00000462276 ARHGAP5Q13017 1502 aa16.14■□□□□ 0.18
RTF1-202ENST00000462276 DIP2BQ9P265 1576 aa16.14■□□□□ 0.17
RTF1-202ENST00000462276 ITSN2Q9NZM3 1697 aa16.14■□□□□ 0.17
RTF1-202ENST00000462276 ZNF644Q9H582 1327 aaPredicted RBP16.14■□□□□ 0.17
RTF1-202ENST00000462276 FANCAO15360 1455 aa16.13■□□□□ 0.17
RTF1-202ENST00000462276 NEO1Q92859 1461 aa16.13■□□□□ 0.17
RTF1-202ENST00000462276 TEX14Q8IWB6 1497 aa16.12■□□□□ 0.17
RTF1-202ENST00000462276 TSPY4P0CV99 314 aa16.11■□□□□ 0.17
RTF1-202ENST00000462276 TSPY10P0CW01 314 aa16.11■□□□□ 0.17
RTF1-202ENST00000462276 PREX2Q70Z35 1606 aa16.11■□□□□ 0.17
RTF1-202ENST00000462276 PTPN23Q9H3S7 1636 aa16.1■□□□□ 0.17
RTF1-202ENST00000462276 AKNAQ7Z591 1439 aa16.1■□□□□ 0.17
RTF1-202ENST00000462276 CAMSAP2Q08AD1 1489 aa16.1■□□□□ 0.17
RTF1-202ENST00000462276 PCGF6Q9BYE7 350 aa16.09■□□□□ 0.17
RTF1-202ENST00000462276 MYO5CQ9NQX4 1742 aa16.08■□□□□ 0.17
RTF1-202ENST00000462276 HNRNPMP52272 730 aaKnown RBP eCLIP16.08■□□□□ 0.16
RTF1-202ENST00000462276 MAP3K4Q9Y6R4 1608 aa16.08■□□□□ 0.16
RTF1-202ENST00000462276 CDC42BPAQ5VT25 1732 aa16.08■□□□□ 0.16
RTF1-202ENST00000462276 MBD5Q9P267 1494 aa16.07■□□□□ 0.16
RTF1-202ENST00000462276 SCAPERQ9BY12 1400 aa16.06■□□□□ 0.16
RTF1-202ENST00000462276 ADGRL1O94910 1474 aa16.05■□□□□ 0.16
RTF1-202ENST00000462276 ABCC5O15440 1437 aa16.05■□□□□ 0.16
RTF1-202ENST00000462276 CFAP74Q9C0B2 1584 aa16.04■□□□□ 0.16
RTF1-202ENST00000462276 DAPK1P53355 1430 aa16.04■□□□□ 0.16
RTF1-202ENST00000462276 ITGAEP38570 1179 aa16.04■□□□□ 0.16
RTF1-202ENST00000462276 CDC42BPBQ9Y5S2 1711 aa16.04■□□□□ 0.16
RTF1-202ENST00000462276 ROCK1Q13464 1354 aa16.03■□□□□ 0.16
RTF1-202ENST00000462276 ACIN1Q9UKV3 1341 aaKnown RBP16.03■□□□□ 0.16
RTF1-202ENST00000462276 ARHGEF5Q12774 1597 aa16.03■□□□□ 0.16
RTF1-202ENST00000462276 SAMD9LQ8IVG5 1584 aa16.03■□□□□ 0.16
RTF1-202ENST00000462276 CCDC141Q6ZP82 1450 aa16.03■□□□□ 0.16
RTF1-202ENST00000462276 DENND4BO75064 1496 aaPredicted RBP16.02■□□□□ 0.15
RTF1-202ENST00000462276 ABCC1P33527 1531 aa16.01■□□□□ 0.15
RTF1-202ENST00000462276 AFAP1Q8N556 730 aa16.01■□□□□ 0.15
RTF1-202ENST00000462276 SHANK2Q9UPX8 1470 aa16.01■□□□□ 0.15
RTF1-202ENST00000462276 KIF13AQ9H1H9 1805 aa16.01■□□□□ 0.15
RTF1-202ENST00000462276 ANKRD30AQ9BXX3 1397 aa16■□□□□ 0.15
RTF1-202ENST00000462276 SPAG9O60271 1321 aaKnown RBP16■□□□□ 0.15
RTF1-202ENST00000462276 HRCP23327 699 aa16■□□□□ 0.15
RTF1-202ENST00000462276 RTEL1-TNFRSF6BF6WH68 1400 aa16■□□□□ 0.15
RTF1-202ENST00000462276 ARHGEF12Q9NZN5 1544 aa15.99■□□□□ 0.15
RTF1-202ENST00000462276 ZNF518AQ6AHZ1 1483 aa15.99■□□□□ 0.15
RTF1-202ENST00000462276 TRAPPC8Q9Y2L5 1435 aa15.99■□□□□ 0.15
RTF1-202ENST00000462276 SYCP2Q9BX26 1530 aa15.99■□□□□ 0.15
RTF1-202ENST00000462276 PTPRKQ15262 1439 aa15.98■□□□□ 0.15
RTF1-202ENST00000462276 C9orf84Q5VXU9 1444 aa15.98■□□□□ 0.15
RTF1-202ENST00000462276 POGZQ7Z3K3 1410 aa15.98■□□□□ 0.15
RTF1-202ENST00000462276 DNMT1P26358 1616 aaKnown RBP15.97■□□□□ 0.15
RTF1-202ENST00000462276 CHIC2Q9UKJ5 165 aa15.97■□□□□ 0.15
RTF1-202ENST00000462276 NCOA1Q15788 1441 aa15.96■□□□□ 0.15
RTF1-202ENST00000462276 ADGRL2O95490 1459 aa15.96■□□□□ 0.14
RTF1-202ENST00000462276 HFM1A2PYH4 1435 aa15.95■□□□□ 0.14
RTF1-202ENST00000462276 RAPGEF3O95398 923 aa15.95■□□□□ 0.14
RTF1-202ENST00000462276 MLH3Q9UHC1 1453 aa15.94■□□□□ 0.14
RTF1-202ENST00000462276 SETD5Q9C0A6 1442 aa15.93■□□□□ 0.14
RTF1-202ENST00000462276 MAGI2Q86UL8 1455 aa15.92■□□□□ 0.14
RTF1-202ENST00000462276 RRP7BPQ9NSQ0 103 aa15.92■□□□□ 0.14
RTF1-202ENST00000462276 MYT1LQ9UL68 1186 aa15.92■□□□□ 0.14
RTF1-202ENST00000462276 MAST1Q9Y2H9 1570 aa15.92■□□□□ 0.14
RTF1-202ENST00000462276 PPRC1Q5VV67 1664 aaKnown RBP15.91■□□□□ 0.14
RTF1-202ENST00000462276 KIF15Q9NS87 1388 aa15.9■□□□□ 0.14
RTF1-202ENST00000462276 NAIPQ13075 1403 aa15.9■□□□□ 0.14
RTF1-202ENST00000462276 KDM5CP41229 1560 aa15.89■□□□□ 0.13
RTF1-202ENST00000462276 SENP3Q9H4L4 574 aaPredicted RBP15.88■□□□□ 0.13
RTF1-202ENST00000462276 ANKRD50Q9ULJ7 1429 aa15.86■□□□□ 0.13
RTF1-202ENST00000462276 COL17A1Q9UMD9 1497 aaPredicted RBP15.86■□□□□ 0.13
RTF1-202ENST00000462276 DHX29Q7Z478 1369 aaKnown RBP15.86■□□□□ 0.13
RTF1-202ENST00000462276 ZMYM4Q5VZL5 1548 aa15.85■□□□□ 0.13
RTF1-202ENST00000462276 TSPOAP1O95153 1857 aa15.85■□□□□ 0.13
RTF1-202ENST00000462276 RAB3GAP2Q9H2M9 1393 aa15.85■□□□□ 0.13
RTF1-202ENST00000462276 ATP7AQ04656 1500 aa15.84■□□□□ 0.13
RTF1-202ENST00000462276 ZFYVE16Q7Z3T8 1539 aa15.84■□□□□ 0.13
RTF1-202ENST00000462276 DUOX2Q9NRD8 1548 aa15.84■□□□□ 0.13
RTF1-202ENST00000462276 PLXNC1O60486 1568 aa15.83■□□□□ 0.13
RTF1-202ENST00000462276 CROCC2H7BZ55 1655 aa15.83■□□□□ 0.13
RTF1-202ENST00000462276 ERBINQ96RT1 1412 aa15.83■□□□□ 0.12
RTF1-202ENST00000462276 HECW2Q9P2P5 1572 aa15.81■□□□□ 0.12
RTF1-202ENST00000462276 INO80Q9ULG1 1556 aaPredicted RBP15.81■□□□□ 0.12
RTF1-202ENST00000462276 ATP10AO60312 1499 aa15.8■□□□□ 0.12
RTF1-202ENST00000462276 A2MP01023 1474 aa15.8■□□□□ 0.12
RTF1-202ENST00000462276 KDM4FA0A1W2PPD8 638 aa15.8■□□□□ 0.12
RTF1-202ENST00000462276 RICTORQ6R327 1708 aa15.8■□□□□ 0.12
RTF1-202ENST00000462276 FRMPD1Q5SYB0 1578 aa15.79■□□□□ 0.12
RTF1-202ENST00000462276 PPP6R1Q9UPN7 881 aa15.78■□□□□ 0.12
RTF1-202ENST00000462276 ADGBQ8N7X0 1667 aa15.78■□□□□ 0.12
RTF1-202ENST00000462276 YEATS2Q9ULM3 1422 aa15.77■□□□□ 0.11
RTF1-202ENST00000462276 KDM6BO15054 1643 aa15.76■□□□□ 0.11
RTF1-202ENST00000462276 KIF3BO15066 747 aa15.76■□□□□ 0.11
RTF1-202ENST00000462276 TRIM52Q96A61 297 aa15.76■□□□□ 0.11
RTF1-202ENST00000462276 KIDINS220Q9ULH0 1771 aa15.76■□□□□ 0.11
RTF1-202ENST00000462276 REREQ9P2R6 1566 aa15.73■□□□□ 0.11
RTF1-202ENST00000462276 NUP155O75694 1391 aa15.73■□□□□ 0.11
RTF1-202ENST00000462276 KANK1Q14678 1352 aa15.73■□□□□ 0.11
RTF1-202ENST00000462276 GCC2Q8IWJ2 1684 aa15.73■□□□□ 0.11
RTF1-202ENST00000462276 AGLP35573 1532 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 162.6 ms